FFCP PHASE1:Mm9::chr5:145965392..145965443,+: Difference between revisions
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{{FFCP|EntrezGene=22757|HGNC=|MCL_coexpression_id=605|UniProt=Q9Z1D8,Q6PAK4,Q69ZT2|association_with_transcript=0bp_to_ENSMUST00000085671,NM_001167944,NM_016683,uc009amn.2,uc009amo.2_5end|description=CAGE_peak_1_at_Zkscan5_5end|id=chr5:145965392..145965443,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.12e-10!63;UBERON:0003056!5.88e-09!49;UBERON:0000153!2.64e-08!94;UBERON:0000923!4.85e-08!314;UBERON:0005291!4.85e-08!314;UBERON:0006598!4.85e-08!314;UBERON:0002532!4.85e-08!314;UBERON:0000991!1.44e-07!18;UBERON:0005564!1.44e-07!18;UBERON:0004111!1.55e-07!122;UBERON:0000025!1.76e-07!114;UBERON:0002346!2.01e-07!71;UBERON:0003075!2.01e-07!71;UBERON:0007284!2.01e-07!71;UBERON:0002050!2.02e-07!317;UBERON:0005423!2.02e-07!317;UBERON:0004176!3.87e-07!17;UBERON:0009196!3.87e-07!17;UBERON:0009117!3.87e-07!17;UBERON:0001048!5.64e-07!147;UBERON:0000473!9.30e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.88e-09,49;UBERON:0010314,1.01e-08,92;UBERON:0002346,2.25e-08,64;UBERON:0003075,2.25e-08,64;UBERON:0007284,2.25e-08,64;UBERON:0000991,1.44e-07,18;UBERON:0005564,1.44e-07,18;UBERON:0004111,1.55e-07,122;UBERON:0000025,1.76e-07,114;UBERON:0001048,1.80e-07,134;UBERON:0004176,3.87e-07,17;UBERON:0009196,3.87e-07,17;UBERON:0009117,3.87e-07,17;UBERON:0004121,4.69e-07,95;UBERON:0000924,4.69e-07,95;UBERON:0006601,4.69e-07,95;UBERON:0005423,4.76e-07,304;UBERON:0010371,6.06e-07,73;UBERON:0000473,9.30e-07,14|phase1_expression=9.92922852049723,7.67745896806594,3.63999391511629,7.86406949397758,6.01074875935617,4.19698179779725,3.97141489012394,5.55230290798778,2.111830832275,4.91535505276186,3.93801326918661,4.14815226775749,8.04643430676667,6.11942816932982,2.99798785634096,4.25198061518635,5.59649502502517,6.46697438984387,7.40417941470989,7.63901373236454,14.2872727453797,6.85107563286109,6.79119451761232,7.35965144849671,7.57050627521661,3.44539178469012,2.15380998079537,3.878482188346,3.6104449696711,4.28451220591882,3.32595765982957,8.25539875497521,6.76571266343027,0,4.04392267651784,6.4831511689812,7.9626048942324,5.02237956884289,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,5.82612423637384,9.56815816614387,9.63080846585388,7.52541683862894,3.9119567217402,7.19483016055474,7.24964403023757,8.94377535741704,8.25919887589639,5.75010257459886,3.35565212115473,2.17608642603403,3.36093799142464,5.65970759279083,4.87106847895886,6.18806510732931,9.5088736604011,11.1088105647127,10.1413024560989,4.40497891689872,8.00365316500025,1.3498495759221,2.96659908770092,0.7104801149461,1.49800055259202,4.99483796918021,9.53944433237994,11.2054928815303,12.1988477583802,5.71301968807607,6.40518768759679,12.2490799214954,11.4056110511701,6.43453150627015,12.1127469099328,7.66124028511126,6.91229399653096,9.10015385338338,9.33173964744578,9.89735404057844,5.862842979029,15.1945904708554,9.62628960993904,6.77645746589436,6.97621235915604,7.82877672466262,5.60373830665562,6.57472572929034,13.0439019915755,2.58127163094416,12.2394840067395,10.7940638327563,7.14754059192436,7.16843019355737,9.40977614882737,6.47635225796619,5.19572009205738,3.5333957451034,10.140726223921,6.41632387071589,0,7.11066703153331,4.11332977921307,4.30711771307668,7.07734223020697,6.62266502370548,8.2860122767095,5.78924342352817,6.07198643681475,5.1759131313064,6.6878494204257,10.0984169170257,9.05433044944927,7.53999547978053,5.6854842578906,9.39895819979426,6.19227386364912,7.60304194752823,7.72945314611377,4.84875253135222,9.31958806090611,10.2473278954042,8.58731497935166,5.8755122697976,5.75112597628417,3.59941638596045,6.4805815807263,10.3355541189328,11.8950156732843,9.1727677042391,8.34356736922927,9.46147192122223,8.3115217823824,9.73447578406546,10.9986512958342,6.96679035416521,6.06534620240819,8.83855794723191,14.8337304977482,9.65588838620586,12.2442248267637,11.7549757911858,14.1515918234762,15.1174189936123,15.8355914505942,13.1938719076898,11.8562396113063,14.9393803332577,11.9646764431485,10.0830036916684,8.61946472599353,10.447564995665,10.2891068203972,11.1459189418356,3.51106593656617,4.11756651383544,3.12579849335152,7.24940203874257,8.20841209933837,8.10279276574567,8.28606574548236,7.28027657465394,6.32495162838251,11.1616293480196,8.31647544338819,10.3921154706781,6.91151369636618,9.02921052435024,8.35008738322314,10.8187990694746,10.0993053033883,11.1391327571109,9.88362758251398,11.8340304236177,6.93879444265976,7.93351699990633,9.81125952462076,9.52170354627798,6.95884291139304,6.45387278794696,7.11609740303585,4.75564065281398,5.69434873853414,7.90554982675252,10.304743560811,8.55512829776949,6.62877896205008,5.39291645192533,7.3486936957396,8.56307474993779,8.53505554288868,7.42615331963237,5.63538678365402,9.16430975303914,11.4431967428899,8.83711330618014,8.60016904889899,6.9376769550413,11.9319033159445,8.39100714668244,8.89357881261447,3.50374722003798,6.09332884850929,5.17182858485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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22757 | |||
|HGNC= | |||
|MCL_coexpression_id=605 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z1D8,uniprot:Q6PAK4,uniprot:Q69ZT2 | |||
|association_with_transcript=0bp_to_ENSMUST00000085671,NM_001167944,NM_016683,uc009amn.2,uc009amo.2_5end | |||
|cluster_id=chr5:145965392..145965443,+ | |||
|description=CAGE_peak_1_at_Zkscan5_5end | |||
|id=chr5:145965392..145965443,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.12e-10!63;UBERON:0003056!5.88e-09!49;UBERON:0000153!2.64e-08!94;UBERON:0000923!4.85e-08!314;UBERON:0005291!4.85e-08!314;UBERON:0006598!4.85e-08!314;UBERON:0002532!4.85e-08!314;UBERON:0000991!1.44e-07!18;UBERON:0005564!1.44e-07!18;UBERON:0004111!1.55e-07!122;UBERON:0000025!1.76e-07!114;UBERON:0002346!2.01e-07!71;UBERON:0003075!2.01e-07!71;UBERON:0007284!2.01e-07!71;UBERON:0002050!2.02e-07!317;UBERON:0005423!2.02e-07!317;UBERON:0004176!3.87e-07!17;UBERON:0009196!3.87e-07!17;UBERON:0009117!3.87e-07!17;UBERON:0001048!5.64e-07!147;UBERON:0000473!9.30e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.88e-09,49;UBERON:0010314,1.01e-08,92;UBERON:0002346,2.25e-08,64;UBERON:0003075,2.25e-08,64;UBERON:0007284,2.25e-08,64;UBERON:0000991,1.44e-07,18;UBERON:0005564,1.44e-07,18;UBERON:0004111,1.55e-07,122;UBERON:0000025,1.76e-07,114;UBERON:0001048,1.80e-07,134;UBERON:0004176,3.87e-07,17;UBERON:0009196,3.87e-07,17;UBERON:0009117,3.87e-07,17;UBERON:0004121,4.69e-07,95;UBERON:0000924,4.69e-07,95;UBERON:0006601,4.69e-07,95;UBERON:0005423,4.76e-07,304;UBERON:0010371,6.06e-07,73;UBERON:0000473,9.30e-07,14 | |||
|phase1_expression=9.92922852049723,7.67745896806594,3.63999391511629,7.86406949397758,6.01074875935617,4.19698179779725,3.97141489012394,5.55230290798778,2.111830832275,4.91535505276186,3.93801326918661,4.14815226775749,8.04643430676667,6.11942816932982,2.99798785634096,4.25198061518635,5.59649502502517,6.46697438984387,7.40417941470989,7.63901373236454,14.2872727453797,6.85107563286109,6.79119451761232,7.35965144849671,7.57050627521661,3.44539178469012,2.15380998079537,3.878482188346,3.6104449696711,4.28451220591882,3.32595765982957,8.25539875497521,6.76571266343027,0,4.04392267651784,6.4831511689812,7.9626048942324,5.02237956884289,5.4693474116666,5.23523743973798,4.1176204162171,7.5135003345429,5.82612423637384,9.56815816614387,9.63080846585388,7.52541683862894,3.9119567217402,7.19483016055474,7.24964403023757,8.94377535741704,8.25919887589639,5.75010257459886,3.35565212115473,2.17608642603403,3.36093799142464,5.65970759279083,4.87106847895886,6.18806510732931,9.5088736604011,11.1088105647127,10.1413024560989,4.40497891689872,8.00365316500025,1.3498495759221,2.96659908770092,0.7104801149461,1.49800055259202,4.99483796918021,9.53944433237994,11.2054928815303,12.1988477583802,5.71301968807607,6.40518768759679,12.2490799214954,11.4056110511701,6.43453150627015,12.1127469099328,7.66124028511126,6.91229399653096,9.10015385338338,9.33173964744578,9.89735404057844,5.862842979029,15.1945904708554,9.62628960993904,6.77645746589436,6.97621235915604,7.82877672466262,5.60373830665562,6.57472572929034,13.0439019915755,2.58127163094416,12.2394840067395,10.7940638327563,7.14754059192436,7.16843019355737,9.40977614882737,6.47635225796619,5.19572009205738,3.5333957451034,10.140726223921,6.41632387071589,0,7.11066703153331,4.11332977921307,4.30711771307668,7.07734223020697,6.62266502370548,8.2860122767095,5.78924342352817,6.07198643681475,5.1759131313064,6.6878494204257,10.0984169170257,9.05433044944927,7.53999547978053,5.6854842578906,9.39895819979426,6.19227386364912,7.60304194752823,7.72945314611377,4.84875253135222,9.31958806090611,10.2473278954042,8.58731497935166,5.8755122697976,5.75112597628417,3.59941638596045,6.4805815807263,10.3355541189328,11.8950156732843,9.1727677042391,8.34356736922927,9.46147192122223,8.3115217823824,9.73447578406546,10.9986512958342,6.96679035416521,6.06534620240819,8.83855794723191,14.8337304977482,9.65588838620586,12.2442248267637,11.7549757911858,14.1515918234762,15.1174189936123,15.8355914505942,13.1938719076898,11.8562396113063,14.9393803332577,11.9646764431485,10.0830036916684,8.61946472599353,10.447564995665,10.2891068203972,11.1459189418356,3.51106593656617,4.11756651383544,3.12579849335152,7.24940203874257,8.20841209933837,8.10279276574567,8.28606574548236,7.28027657465394,6.32495162838251,11.1616293480196,8.31647544338819,10.3921154706781,6.91151369636618,9.02921052435024,8.35008738322314,10.8187990694746,10.0993053033883,11.1391327571109,9.88362758251398,11.8340304236177,6.93879444265976,7.93351699990633,9.81125952462076,9.52170354627798,6.95884291139304,6.45387278794696,7.11609740303585,4.75564065281398,5.69434873853414,7.90554982675252,10.304743560811,8.55512829776949,6.62877896205008,5.39291645192533,7.3486936957396,8.56307474993779,8.53505554288868,7.42615331963237,5.63538678365402,9.16430975303914,11.4431967428899,8.83711330618014,8.60016904889899,6.9376769550413,11.9319033159445,8.39100714668244,8.89357881261447,3.50374722003798,6.09332884850929,5.17182858485164,5.88294352026658,8.20002343158217,5.34714288740982,5.4662266115654,7.62035565842666,7.13859674289012,12.9391385874619,11.9085103253921,10.2972432127805,8.5876818502018,11.3020370518805,13.5084185981743,5.54259570499814,11.5589761179996,9.94086356296358,8.65699937453459,8.21415869009757,10.3853879613926,7.14130922658041,8.78101415360095,8.98520321405289,9.52298165489732,10.5240147313941,9.66793556822854,6.73471429276993,7.23245292907558,7.53956419696361,5.4390568381871,9.34352118736169,4.96686143348518,9.9541365792431,8.90808818100744,4.59017847054691,10.0988370881749,6.94118082715765,8.58965237452605,12.2791336707695,9.08081432219698,9.13474563737816,6.22768367735431,8.90583543684768,8.76767573733936,9.48690667071656,9.3183181762324,8.09058485687131,9.08134578703002,11.0763132360432,7.75359577970917,2.65490276679926,8.74010290157933,8.16273603804828,7.54420319023592,7.38254732201932,7.07100840271033,6.46070732920553,9.45187696641514,6.06045543254026,7.58488219045958,3.16255825724996,10.3135543248187,10.8940673841212,12.6042765821917,12.2890749593617,12.8602221018955,8.15765074754458,8.20496560969525,10.3665882979336,6.39376393140658,3.28540391289194,8.04961869282517,4.19003956304428,3.95727007059552,6.78150592122803,6.03129249281559,6.2073618881631,5.58079059133208,4.66369338607761,9.6421157045465,4.78438466233988,7.42992724667601,7.9633646768976,6.78126445216888,6.01454601972511,6.40578884978263,7.47905091972963,4.75834937900437,6.63359874261234,4.77335309007557,14.0769517143605,8.3360981522008,7.34436317588249,7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| |||
|short_description=p1@Zkscan5 | |||
}} |
Revision as of 01:22, 4 August 2015
Short description: | p1@Zkscan5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zkscan5_5end |
Coexpression cluster: | MCL_coexpression_mm9:605 |
Association with transcript: | 0bp_to_ENSMUST00000085671, NM_001167944, NM_016683, uc009amn.2, uc009amo.2_5end |
EntrezGene: | 22757 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.88e-09 | 49 |
structure with developmental contribution from neural crest | 1.01e-08 | 92 |
neurectoderm | 2.25e-08 | 64 |
neural plate | 2.25e-08 | 64 |
presumptive neural plate | 2.25e-08 | 64 |
gonad | 1.44e-07 | 18 |
gonad primordium | 1.44e-07 | 18 |
anatomical conduit | 1.55e-07 | 122 |
tube | 1.76e-07 | 114 |
primordium | 1.80e-07 | 134 |
external genitalia | 3.87e-07 | 17 |
indifferent external genitalia | 3.87e-07 | 17 |
indifferent gonad | 3.87e-07 | 17 |
ectoderm-derived structure | 4.69e-07 | 95 |
ectoderm | 4.69e-07 | 95 |
presumptive ectoderm | 4.69e-07 | 95 |
developing anatomical structure | 4.76e-07 | 304 |
ecto-epithelium | 6.06e-07 | 73 |
testis | 9.30e-07 | 14 |