FFCP PHASE1:Mm9::chr5:31262609..31262693,-: Difference between revisions
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{{FFCP|EntrezGene=50907|HGNC=|MCL_coexpression_id=700|UniProt=D3Z3S1|association_with_transcript=0bp_to_ENSMUST00000088063,ENSMUST00000123211,ENSMUST00000125986,ENSMUST00000127081_5end|description=CAGE_peak_1_at_Preb_5end|id=chr5:31262609..31262693,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.53e-15!43;UBERON:0004119!8.22e-15!130;UBERON:0000925!8.22e-15!130;UBERON:0006595!8.22e-15!130;UBERON:0001007!4.32e-14!128;UBERON:0001555!4.32e-14!128;UBERON:0007026!4.32e-14!128;UBERON:0005409!7.14e-14!59;UBERON:0004921!2.88e-13!126;UBERON:0004185!2.88e-13!126;UBERON:0003929!1.71e-10!55;UBERON:0000949!1.50e-09!72;UBERON:0000490!2.22e-09!66;UBERON:0002365!5.95e-09!25;UBERON:0002330!5.95e-09!25;UBERON:0009854!3.63e-08!23;UBERON:0009856!3.63e-08!23;UBERON:0002107!7.92e-08!22;UBERON:0007499!7.92e-08!22;UBERON:0006925!7.92e-08!22;UBERON:0009497!7.92e-08!22;UBERON:0000015!7.92e-08!22;UBERON:0002423!7.92e-08!22;UBERON:0006235!7.92e-08!22;UBERON:0008835!7.92e-08!22;UBERON:0003894!7.92e-08!22;UBERON:0004161!7.92e-08!22;UBERON:0008836!7.92e-08!22;UBERON:0002108!9.92e-08!16;UBERON:0002530!1.44e-07!65;UBERON:0000344!2.55e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-10,31;UBERON:0003929,1.71e-10,55;UBERON:0004119,1.75e-10,118;UBERON:0000925,1.75e-10,118;UBERON:0006595,1.75e-10,118;UBERON:0001007,7.12e-10,116;UBERON:0001555,7.12e-10,116;UBERON:0007026,7.12e-10,116;UBERON:0000949,1.50e-09,72;UBERON:0005409,2.08e-09,47;UBERON:0000490,2.22e-09,66;UBERON:0004921,3.50e-09,114;UBERON:0002365,5.95e-09,25;UBERON:0002330,5.95e-09,25;UBERON:0009854,3.63e-08,23;UBERON:0009856,3.63e-08,23;UBERON:0002107,7.92e-08,22;UBERON:0007499,7.92e-08,22;UBERON:0006925,7.92e-08,22;UBERON:0009497,7.92e-08,22;UBERON:0000015,7.92e-08,22;UBERON:0002423,7.92e-08,22;UBERON:0006235,7.92e-08,22;UBERON:0008835,7.92e-08,22;UBERON:0003894,7.92e-08,22;UBERON:0004161,7.92e-08,22;UBERON:0008836,7.92e-08,22;UBERON:0002530,1.44e-07,65;UBERON:0000344,2.55e-07,15|phase1_expression=44.5213794951327,198.218031539157,175.174707164971,142.763107736824,180.322462780685,91.6620824638918,96.4820205659521,57.3307556080599,41.814250479045,43.0678728432468,49.9956467218475,44.8319533553791,54.099430658261,66.002403826343,28.3143297543313,39.4826771410161,26.5833513688696,52.5244505321466,49.7725393988832,44.1365237869951,45.072943780067,38.8227619195462,30.0379757509776,80.7961735106704,96.5813073292786,153.31993441871,103.813641074337,117.43182181381,101.092459150791,115.177769300288,105.76545358258,36.8317790606586,43.0545351309199,31.6963362030877,46.7939623997065,52.6963825786421,50.4298309968052,175.783284909501,129.701667190951,125.122174809738,240.586678604685,214.476282276952,174.298216738184,49.9810367363042,43.1865726995132,44.2347672709652,33.6428278069657,38.1544023665781,37.7860234303292,32.0809333472568,36.8164288874703,41.6882436658418,56.0393904232839,39.1695556686126,51.7584450679395,38.5889154053921,39.2550812716097,34.0343580903112,38.0354946416044,44.9642332381228,23.4517619297286,45.0663227651946,39.1289710288901,50.3943841677583,43.5101199529469,49.0231279312809,47.6364175724264,45.721978333265,37.9503981049028,42.3918646361509,39.9617426567626,52.2741301458961,52.1249756645808,35.6448225715516,39.7758704725681,23.8996884518605,58.361416929676,43.4136949489638,43.3170423782607,43.6543612386942,41.2609272646868,32.8175423450759,54.1615018062679,55.1507357831046,48.1314480496952,38.0070875261031,43.4233626437264,40.0758808524396,45.9657993532427,44.8139351433238,41.1607573956382,103.250865237766,110.155356060656,105.781825561012,97.4664626171504,76.6125976936444,56.3182124728325,40.7328470961558,38.7081146858274,41.3407302177098,44.2248338098777,47.4807966432976,66.2493623237279,49.7746692207332,27.0613801264018,28.376304933211,23.7596489156948,60.2890884916637,35.9923658269569,54.0329386195962,45.8001262662599,45.365356268509,45.8924839539556,46.1211280091025,44.3309425901607,43.354974008738,89.9789682553121,34.2700475900191,44.2305275974937,48.5300549842228,45.7141943213015,56.2455293636858,76.4206220994301,63.5334329515057,57.8072910805136,100.650079752185,28.3961845079031,47.3923157484792,41.8061047070383,45.5363543790661,43.0050566649509,39.2041578592137,43.9775530086459,61.3717097592793,44.4666415357459,52.4039279708857,45.725874368792,57.7248343630832,69.7514813276942,47.7703012862296,42.9397461776922,44.6010082600937,32.2311212351575,40.0874815443002,33.6780670799073,34.5907044769094,37.668093273011,44.2382763963717,30.3950870035308,40.2795950757455,42.5801720476756,46.907886739501,39.2046621408093,43.879772981793,45.2720700097476,47.3701555028014,61.7947604835647,55.072452122549,54.5593918839538,27.7548535197573,33.0681744573346,33.4915434317488,25.8051761787879,34.4337405557957,36.715572867196,32.3222183203067,30.0466209567573,31.0595810696671,32.2537305830422,37.922684202271,39.6426478679235,45.468196089278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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50907 | |||
|HGNC= | |||
|MCL_coexpression_id=700 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z3S1 | |||
|association_with_transcript=0bp_to_ENSMUST00000088063,ENSMUST00000123211,ENSMUST00000125986,ENSMUST00000127081_5end | |||
|cluster_id=chr5:31262609..31262693,- | |||
|description=CAGE_peak_1_at_Preb_5end | |||
|id=chr5:31262609..31262693,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.53e-15!43;UBERON:0004119!8.22e-15!130;UBERON:0000925!8.22e-15!130;UBERON:0006595!8.22e-15!130;UBERON:0001007!4.32e-14!128;UBERON:0001555!4.32e-14!128;UBERON:0007026!4.32e-14!128;UBERON:0005409!7.14e-14!59;UBERON:0004921!2.88e-13!126;UBERON:0004185!2.88e-13!126;UBERON:0003929!1.71e-10!55;UBERON:0000949!1.50e-09!72;UBERON:0000490!2.22e-09!66;UBERON:0002365!5.95e-09!25;UBERON:0002330!5.95e-09!25;UBERON:0009854!3.63e-08!23;UBERON:0009856!3.63e-08!23;UBERON:0002107!7.92e-08!22;UBERON:0007499!7.92e-08!22;UBERON:0006925!7.92e-08!22;UBERON:0009497!7.92e-08!22;UBERON:0000015!7.92e-08!22;UBERON:0002423!7.92e-08!22;UBERON:0006235!7.92e-08!22;UBERON:0008835!7.92e-08!22;UBERON:0003894!7.92e-08!22;UBERON:0004161!7.92e-08!22;UBERON:0008836!7.92e-08!22;UBERON:0002108!9.92e-08!16;UBERON:0002530!1.44e-07!65;UBERON:0000344!2.55e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-10,31;UBERON:0003929,1.71e-10,55;UBERON:0004119,1.75e-10,118;UBERON:0000925,1.75e-10,118;UBERON:0006595,1.75e-10,118;UBERON:0001007,7.12e-10,116;UBERON:0001555,7.12e-10,116;UBERON:0007026,7.12e-10,116;UBERON:0000949,1.50e-09,72;UBERON:0005409,2.08e-09,47;UBERON:0000490,2.22e-09,66;UBERON:0004921,3.50e-09,114;UBERON:0002365,5.95e-09,25;UBERON:0002330,5.95e-09,25;UBERON:0009854,3.63e-08,23;UBERON:0009856,3.63e-08,23;UBERON:0002107,7.92e-08,22;UBERON:0007499,7.92e-08,22;UBERON:0006925,7.92e-08,22;UBERON:0009497,7.92e-08,22;UBERON:0000015,7.92e-08,22;UBERON:0002423,7.92e-08,22;UBERON:0006235,7.92e-08,22;UBERON:0008835,7.92e-08,22;UBERON:0003894,7.92e-08,22;UBERON:0004161,7.92e-08,22;UBERON:0008836,7.92e-08,22;UBERON:0002530,1.44e-07,65;UBERON:0000344,2.55e-07,15 | |||
|phase1_expression=44.5213794951327,198.218031539157,175.174707164971,142.763107736824,180.322462780685,91.6620824638918,96.4820205659521,57.3307556080599,41.814250479045,43.0678728432468,49.9956467218475,44.8319533553791,54.099430658261,66.002403826343,28.3143297543313,39.4826771410161,26.5833513688696,52.5244505321466,49.7725393988832,44.1365237869951,45.072943780067,38.8227619195462,30.0379757509776,80.7961735106704,96.5813073292786,153.31993441871,103.813641074337,117.43182181381,101.092459150791,115.177769300288,105.76545358258,36.8317790606586,43.0545351309199,31.6963362030877,46.7939623997065,52.6963825786421,50.4298309968052,175.783284909501,129.701667190951,125.122174809738,240.586678604685,214.476282276952,174.298216738184,49.9810367363042,43.1865726995132,44.2347672709652,33.6428278069657,38.1544023665781,37.7860234303292,32.0809333472568,36.8164288874703,41.6882436658418,56.0393904232839,39.1695556686126,51.7584450679395,38.5889154053921,39.2550812716097,34.0343580903112,38.0354946416044,44.9642332381228,23.4517619297286,45.0663227651946,39.1289710288901,50.3943841677583,43.5101199529469,49.0231279312809,47.6364175724264,45.721978333265,37.9503981049028,42.3918646361509,39.9617426567626,52.2741301458961,52.1249756645808,35.6448225715516,39.7758704725681,23.8996884518605,58.361416929676,43.4136949489638,43.3170423782607,43.6543612386942,41.2609272646868,32.8175423450759,54.1615018062679,55.1507357831046,48.1314480496952,38.0070875261031,43.4233626437264,40.0758808524396,45.9657993532427,44.8139351433238,41.1607573956382,103.250865237766,110.155356060656,105.781825561012,97.4664626171504,76.6125976936444,56.3182124728325,40.7328470961558,38.7081146858274,41.3407302177098,44.2248338098777,47.4807966432976,66.2493623237279,49.7746692207332,27.0613801264018,28.376304933211,23.7596489156948,60.2890884916637,35.9923658269569,54.0329386195962,45.8001262662599,45.365356268509,45.8924839539556,46.1211280091025,44.3309425901607,43.354974008738,89.9789682553121,34.2700475900191,44.2305275974937,48.5300549842228,45.7141943213015,56.2455293636858,76.4206220994301,63.5334329515057,57.8072910805136,100.650079752185,28.3961845079031,47.3923157484792,41.8061047070383,45.5363543790661,43.0050566649509,39.2041578592137,43.9775530086459,61.3717097592793,44.4666415357459,52.4039279708857,45.725874368792,57.7248343630832,69.7514813276942,47.7703012862296,42.9397461776922,44.6010082600937,32.2311212351575,40.0874815443002,33.6780670799073,34.5907044769094,37.668093273011,44.2382763963717,30.3950870035308,40.2795950757455,42.5801720476756,46.907886739501,39.2046621408093,43.879772981793,45.2720700097476,47.3701555028014,61.7947604835647,55.072452122549,54.5593918839538,27.7548535197573,33.0681744573346,33.4915434317488,25.8051761787879,34.4337405557957,36.715572867196,32.3222183203067,30.0466209567573,31.0595810696671,32.2537305830422,37.922684202271,39.6426478679235,45.4681960892784,45.6664239805385,44.5565310284434,50.8901675525188,37.7659927431974,90.5347465375607,101.549017598801,39.6716145995535,38.5512875288328,47.9386956118187,62.9252596824829,71.1609740303585,84.4601779939763,91.5841088780907,86.1375533206577,93.7480328825005,85.5512829776949,98.0669358209174,91.6795796827306,78.8903882042634,82.444487127308,33.1918826667893,42.957440741258,39.4477074855781,42.3594761918254,47.1304543817331,42.6425784933137,50.3362835509088,63.7675839271881,54.0075623774329,67.2514543373813,131.624966426694,43.2128823804684,54.6434006414704,55.0912175342892,64.5095186015439,66.564896091667,83.2626535325243,70.4855536754486,54.3153009696369,90.6052663520669,96.3246983733275,95.6402235508054,80.5057196635566,112.650179564412,140.647572201179,83.9451727172259,38.0591571743206,38.8457394129494,33.0818902177313,38.7018795567429,37.0810592295833,37.6889079244085,34.516327928472,43.3196698244313,37.6747994413796,37.6489972402917,41.9366041569191,48.5035411558584,45.7615201944623,43.6840156916165,36.1899081454253,40.2490206025845,87.5340405973885,84.7125811155529,49.4495817162399,55.2067043849277,40.3279965626622,52.766423785714,31.8663301610419,28.111589589358,33.3906266485838,38.2350076724083,37.4301772458422,40.479943902803,32.3848561339915,36.8242380968253,31.6230222357219,45.9489482483184,47.2660483743535,53.7758123075111,38.2784354480904,75.2263760754762,193.807901976346,38.3593405124871,56.8368287093732,107.504895460862,111.624115508932,116.517921070749,93.551042126896,66.890206223861,67.734501893097,140.636357281438,210.837217149998,143.35840511498,90.2164955247538,45.1953346018589,52.6489842995811,45.0107773566344,40.6109135040806,42.6301474068949,41.3018041711324,56.0215506370863,69.2281538787946,76.8950417235667,130.552811648537,40.3971319706626,27.7718813916958,33.2324216354139,38.9153841450225,43.9897611316764,95.605714414591,49.6939809388166,45.1099125306331,50.3583957830263,44.2614920413611,41.8177974550414,44.1522355538911,47.1283036805437,45.3842408083594,47.7234452423674,46.4351911982864,71.6002963511335,33.21527932601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| |||
|short_description=p1@Preb | |||
}} |
Revision as of 06:51, 4 August 2015
Short description: | p1@Preb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Preb_5end |
Coexpression cluster: | MCL_coexpression_mm9:700 |
Association with transcript: | 0bp_to_ENSMUST00000088063, ENSMUST00000123211, ENSMUST00000125986, ENSMUST00000127081_5end |
EntrezGene: | 50907 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-10 | 31 |
gut epithelium | 1.71e-10 | 55 |
endoderm-derived structure | 1.75e-10 | 118 |
endoderm | 1.75e-10 | 118 |
presumptive endoderm | 1.75e-10 | 118 |
digestive system | 7.12e-10 | 116 |
digestive tract | 7.12e-10 | 116 |
primitive gut | 7.12e-10 | 116 |
endocrine system | 1.50e-09 | 72 |
gastrointestinal system | 2.08e-09 | 47 |
unilaminar epithelium | 2.22e-09 | 66 |
subdivision of digestive tract | 3.50e-09 | 114 |
exocrine gland | 5.95e-09 | 25 |
exocrine system | 5.95e-09 | 25 |
digestive tract diverticulum | 3.63e-08 | 23 |
sac | 3.63e-08 | 23 |
liver | 7.92e-08 | 22 |
epithelial sac | 7.92e-08 | 22 |
digestive gland | 7.92e-08 | 22 |
epithelium of foregut-midgut junction | 7.92e-08 | 22 |
anatomical boundary | 7.92e-08 | 22 |
hepatobiliary system | 7.92e-08 | 22 |
foregut-midgut junction | 7.92e-08 | 22 |
hepatic diverticulum | 7.92e-08 | 22 |
liver primordium | 7.92e-08 | 22 |
septum transversum | 7.92e-08 | 22 |
liver bud | 7.92e-08 | 22 |
gland | 1.44e-07 | 65 |
mucosa | 2.55e-07 | 15 |