FFCP PHASE1:Mm9::chr6:103460767..103460778,+: Difference between revisions
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{{FFCP|EntrezGene=12661|HGNC=|MCL_coexpression_id=112|UniProt=E9QMU6,A2RRK1,E9QL95,P70232|association_with_transcript=-91bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end|description=CAGE_peak_13_at_Chl1_5end|id=chr6:103460767..103460778,+|ontology_enrichment_celltype=CL:0000540!3.77e-14!33;CL:0000047!3.77e-14!33;CL:0000031!3.77e-14!33;CL:0000404!3.77e-14!33;CL:0002319!1.33e-12!43;CL:0000221!4.27e-12!44;CL:0000133!4.27e-12!44;CL:0000393!1.21e-10!39;CL:0000211!1.21e-10!39;CL:0000107!1.58e-09!9;CL:0000055!1.61e-09!50;CL:0000117!1.08e-07!23;CL:0000337!1.08e-07!23|ontology_enrichment_celltype_v019_2=CL:0000107,3.74e-19,9;CL:0000540,1.58e-12,33;CL:0000047,1.58e-12,33;CL:0000031,1.58e-12,33;CL:0000404,1.58e-12,33;CL:0002319,4.57e-12,43;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0002609,1.39e-10,6;CL:0000393,1.71e-10,39;CL:0000211,1.71e-10,39;CL:0002321,4.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.95e-19!75;UBERON:0001016!8.95e-19!75;UBERON:0001017!1.59e-17!73;UBERON:0005743!1.59e-17!73;UBERON:0004121!3.14e-15!102;UBERON:0000924!3.14e-15!102;UBERON:0006601!3.14e-15!102;UBERON:0002020!1.93e-13!34;UBERON:0002791!9.62e-13!29;UBERON:0003528!9.62e-13!29;UBERON:0001893!9.62e-13!29;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002346!2.70e-12!71;UBERON:0003075!2.70e-12!71;UBERON:0007284!2.70e-12!71;UBERON:0000956!2.78e-11!21;UBERON:0001869!2.78e-11!21;UBERON:0000203!2.78e-11!21;UBERON:0002616!2.84e-11!49;UBERON:0000955!7.52e-11!50;UBERON:0006238!7.52e-11!50;UBERON:0000010!9.82e-11!11;UBERON:0003080!3.30e-10!40;UBERON:0002410!1.58e-09!9;UBERON:0002780!1.62e-09!39;UBERON:0001890!1.62e-09!39;UBERON:0006240!1.62e-09!39;UBERON:0000033!1.22e-08!63;UBERON:0003056!2.59e-08!49;UBERON:0002619!5.48e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.83e-22,11;UBERON:0000011,1.30e-21,3;UBERON:0002410,3.74e-19,9;UBERON:0001016,5.70e-10,75;UBERON:0001017,2.43e-08,73;UBERON:0000956,5.31e-08,21;UBERON:0001869,5.31e-08,21;UBERON:0000203,5.31e-08,21;UBERON:0004121,1.28e-07,95;UBERON:0000924,1.28e-07,95;UBERON:0006601,1.28e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.03689612308478,0.810035629990144,1.26194976810829,0,0.220868540951614,0.61245399607477,0.0958454710182364,1.83843757322004,0,0.255374676170375,0.153606533256243,0.659431438650969,0.365950574409639,0.52091337055676,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0.075726193333184,4.83657984683427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.599162557619291,0,0.376963056338593,0.347648640384553,0.255715457330331,0,0.486723789203273,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,3.60166143327496,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0.315508219416257,1.17131623288992,0.861693590931196,2.15071918157297,2.89638276307112,2.26461224631066,0.404810701674894,0.292255857911312,1.97643888973262,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0.505394423527595,0,0.377252682772152,0.468207537349412,0.448176066834085,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0.789209134313529,0,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p13@Chl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12661 | |||
|HGNC= | |||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QMU6,uniprot:A2RRK1,uniprot:E9QL95,uniprot:P70232 | |||
|association_with_transcript=-91bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |||
|cluster_id=chr6:103460767..103460778,+ | |||
|description=CAGE_peak_13_at_Chl1_5end | |||
|id=chr6:103460767..103460778,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.77e-14!33;CL:0000047!3.77e-14!33;CL:0000031!3.77e-14!33;CL:0000404!3.77e-14!33;CL:0002319!1.33e-12!43;CL:0000221!4.27e-12!44;CL:0000133!4.27e-12!44;CL:0000393!1.21e-10!39;CL:0000211!1.21e-10!39;CL:0000107!1.58e-09!9;CL:0000055!1.61e-09!50;CL:0000117!1.08e-07!23;CL:0000337!1.08e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.74e-19,9;CL:0000540,1.58e-12,33;CL:0000047,1.58e-12,33;CL:0000031,1.58e-12,33;CL:0000404,1.58e-12,33;CL:0002319,4.57e-12,43;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0002609,1.39e-10,6;CL:0000393,1.71e-10,39;CL:0000211,1.71e-10,39;CL:0002321,4.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.95e-19!75;UBERON:0001016!8.95e-19!75;UBERON:0001017!1.59e-17!73;UBERON:0005743!1.59e-17!73;UBERON:0004121!3.14e-15!102;UBERON:0000924!3.14e-15!102;UBERON:0006601!3.14e-15!102;UBERON:0002020!1.93e-13!34;UBERON:0002791!9.62e-13!29;UBERON:0003528!9.62e-13!29;UBERON:0001893!9.62e-13!29;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002346!2.70e-12!71;UBERON:0003075!2.70e-12!71;UBERON:0007284!2.70e-12!71;UBERON:0000956!2.78e-11!21;UBERON:0001869!2.78e-11!21;UBERON:0000203!2.78e-11!21;UBERON:0002616!2.84e-11!49;UBERON:0000955!7.52e-11!50;UBERON:0006238!7.52e-11!50;UBERON:0000010!9.82e-11!11;UBERON:0003080!3.30e-10!40;UBERON:0002410!1.58e-09!9;UBERON:0002780!1.62e-09!39;UBERON:0001890!1.62e-09!39;UBERON:0006240!1.62e-09!39;UBERON:0000033!1.22e-08!63;UBERON:0003056!2.59e-08!49;UBERON:0002619!5.48e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.83e-22,11;UBERON:0000011,1.30e-21,3;UBERON:0002410,3.74e-19,9;UBERON:0001016,5.70e-10,75;UBERON:0001017,2.43e-08,73;UBERON:0000956,5.31e-08,21;UBERON:0001869,5.31e-08,21;UBERON:0000203,5.31e-08,21;UBERON:0004121,1.28e-07,95;UBERON:0000924,1.28e-07,95;UBERON:0006601,1.28e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.03689612308478,0.810035629990144,1.26194976810829,0,0.220868540951614,0.61245399607477,0.0958454710182364,1.83843757322004,0,0.255374676170375,0.153606533256243,0.659431438650969,0.365950574409639,0.52091337055676,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0.075726193333184,4.83657984683427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.599162557619291,0,0.376963056338593,0.347648640384553,0.255715457330331,0,0.486723789203273,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,3.60166143327496,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0.315508219416257,1.17131623288992,0.861693590931196,2.15071918157297,2.89638276307112,2.26461224631066,0.404810701674894,0.292255857911312,1.97643888973262,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0.505394423527595,0,0.377252682772152,0.468207537349412,0.448176066834085,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0.789209134313529,0,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p13@Chl1 | |||
}} |
Revision as of 20:50, 4 August 2015
Short description: | p13@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | -91bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | 12661 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.74e-19 | 9 |
neuron | 1.58e-12 | 33 |
neuronal stem cell | 1.58e-12 | 33 |
neuroblast | 1.58e-12 | 33 |
electrically signaling cell | 1.58e-12 | 33 |
neural cell | 4.57e-12 | 43 |
ectodermal cell | 8.98e-12 | 44 |
neurectodermal cell | 8.98e-12 | 44 |
neuron of cerebral cortex | 1.39e-10 | 6 |
electrically responsive cell | 1.71e-10 | 39 |
electrically active cell | 1.71e-10 | 39 |
embryonic cell | 4.67e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.83e-22 | 11 |
parasympathetic nervous system | 1.30e-21 | 3 |
autonomic nervous system | 3.74e-19 | 9 |
nervous system | 5.70e-10 | 75 |
central nervous system | 2.43e-08 | 73 |
cerebral cortex | 5.31e-08 | 21 |
cerebral hemisphere | 5.31e-08 | 21 |
pallium | 5.31e-08 | 21 |
ectoderm-derived structure | 1.28e-07 | 95 |
ectoderm | 1.28e-07 | 95 |
presumptive ectoderm | 1.28e-07 | 95 |