FFCP PHASE1:Hg19::chr9:5098356..5098369,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000431069_5end | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_1_at_ENST00000431069_5end | |||
|id=chr9:5098356..5098369,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;8.00e-18;3!CL:0000540;1.22e-09;6!CL:0000404;1.22e-09;6!CL:0000094;1.59e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.00e-18,3;CL:0000540,1.22e-09,6;CL:0000031,1.22e-09,6;CL:0000404,1.22e-09,6;CL:0000047,1.49e-07,8;CL:0000094,1.59e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.22e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!6.08e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.12e-50;1!UBERON:0000026;5.12e-50;1!UBERON:0008784;5.12e-50;1!UBERON:0006058;5.12e-50;1!UBERON:0003663;5.12e-50;1!UBERON:0004256;5.12e-50;1!UBERON:0004708;5.12e-50;1!UBERON:0002101;5.12e-50;1!UBERON:0004709;5.12e-50;1!UBERON:0002529;5.12e-50;1!UBERON:0010538;5.12e-50;1!UBERON:0003661;5.12e-50;1!UBERON:0010890;5.12e-50;1!UBERON:0002471;5.12e-50;1!UBERON:0001383;5.12e-50;1!UBERON:0010758;5.12e-50;1!UBERON:0010707;5.12e-50;1!UBERON:0000978;5.12e-50;1!UBERON:0002103;5.12e-50;1!UBERON:0001665;5.12e-50;1!UBERON:0003823;5.12e-50;1!UBERON:0000154;5.12e-50;1!UBERON:0010709;5.12e-50;1!UBERON:0005090;8.10e-26;2!UBERON:0001630;8.10e-26;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.99e-50,1;UBERON:0001389,3.99e-50,1;UBERON:0000026,3.99e-50,1;UBERON:0008784,3.99e-50,1;UBERON:0006058,3.99e-50,1;UBERON:0003663,3.99e-50,1;UBERON:0004256,3.99e-50,1;UBERON:0004708,3.99e-50,1;UBERON:0002101,3.99e-50,1;UBERON:0004709,3.99e-50,1;UBERON:0002529,3.99e-50,1;UBERON:0010538,3.99e-50,1;UBERON:0003661,3.99e-50,1;UBERON:0010890,3.99e-50,1;UBERON:0002471,3.99e-50,1;UBERON:0001383,3.99e-50,1;UBERON:0004357,3.99e-50,1;UBERON:0004347,3.99e-50,1;UBERON:0005420,3.99e-50,1;UBERON:0005732,3.99e-50,1;UBERON:0010758,3.99e-50,1;UBERON:0010707,3.99e-50,1;UBERON:0000978,3.99e-50,1;UBERON:0002103,3.99e-50,1;UBERON:0001665,3.99e-50,1;UBERON:0003823,3.99e-50,1;UBERON:0000154,3.99e-50,1;UBERON:0010709,3.99e-50,1;UBERON:0005733,3.99e-50,1;UBERON:0005730,3.99e-50,1;UBERON:0005090,7.14e-26,2;UBERON:0001630,7.14e-26,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,21.2194155973825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000431069 | |||
}} |
Revision as of 00:41, 23 January 2014
Short description: | p1@ENST00000431069 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000431069_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | 15bp_to_ENST00000431069_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.00e-18 | 3 |
neuron | 1.22e-09 | 6 |
neuroblast | 1.22e-09 | 6 |
electrically signaling cell | 1.22e-09 | 6 |
neuronal stem cell | 1.49e-07 | 8 |
granulocyte | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.99e-50 | 1 |
soleus muscle | 3.99e-50 | 1 |
appendage | 3.99e-50 | 1 |
lower limb segment | 3.99e-50 | 1 |
multi-limb segment region | 3.99e-50 | 1 |
hindlimb muscle | 3.99e-50 | 1 |
hindlimb zeugopod muscle | 3.99e-50 | 1 |
paired limb/fin | 3.99e-50 | 1 |
limb | 3.99e-50 | 1 |
pelvic appendage | 3.99e-50 | 1 |
limb segment | 3.99e-50 | 1 |
paired limb/fin segment | 3.99e-50 | 1 |
limb muscle | 3.99e-50 | 1 |
pelvic complex muscle | 3.99e-50 | 1 |
zeugopod | 3.99e-50 | 1 |
muscle of leg | 3.99e-50 | 1 |
paired limb/fin bud | 3.99e-50 | 1 |
limb bud | 3.99e-50 | 1 |
pelvic appendage bud | 3.99e-50 | 1 |
limb/fin field | 3.99e-50 | 1 |
subdivision of organism along appendicular axis | 3.99e-50 | 1 |
appendage girdle complex | 3.99e-50 | 1 |
leg | 3.99e-50 | 1 |
hindlimb | 3.99e-50 | 1 |
triceps surae | 3.99e-50 | 1 |
hindlimb zeugopod | 3.99e-50 | 1 |
posterior region of body | 3.99e-50 | 1 |
pelvic complex | 3.99e-50 | 1 |
limb field | 3.99e-50 | 1 |
hindlimb/pelvic fin field | 3.99e-50 | 1 |
muscle structure | 7.14e-26 | 2 |
muscle organ | 7.14e-26 | 2 |