Personal tools

FFCP PHASE1:Mm9::chr6:136610392..136610415,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=66857|HGNC=|MCL_coexpression_id=3|UniProt=Q8VCI0|association_with_transcript=0bp_to_ENSMUST00000137139,NM_025806,uc009elz.2,uc009ema.2_5end|description=CAGE_peak_5_at_Plbd1_5end|id=chr6:136610392..136610415,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.54e-14!130;UBERON:0000925!1.54e-14!130;UBERON:0006595!1.54e-14!130;UBERON:0001007!1.01e-13!128;UBERON:0001555!1.01e-13!128;UBERON:0007026!1.01e-13!128;UBERON:0004921!1.19e-12!126;UBERON:0004185!1.19e-12!126;UBERON:0004923!1.08e-11!24;UBERON:0005409!2.06e-10!59;UBERON:0000926!3.86e-08!193;UBERON:0004120!3.86e-08!193;UBERON:0006603!3.86e-08!193;UBERON:0002405!8.36e-08!70;UBERON:0000344!8.99e-08!15;UBERON:0000160!9.65e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.27e-19,118;UBERON:0000925,9.27e-19,118;UBERON:0006595,9.27e-19,118;UBERON:0005409,4.16e-18,47;UBERON:0001007,1.16e-17,116;UBERON:0001555,1.16e-17,116;UBERON:0007026,1.16e-17,116;UBERON:0004921,3.30e-16,114;UBERON:0004923,2.48e-15,24;UBERON:0000160,9.83e-14,31;UBERON:0000344,5.24e-10,15;UBERON:0001242,2.99e-08,13;UBERON:0001262,2.99e-08,13;UBERON:0004786,2.99e-08,13|phase1_expression=0.320297694209588,3.48975407639361,5.91499011206397,4.83942738090928,3.50627010962443,3.18970616632591,1.40167584357315,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,2.99798785634096,2.42970320867791,2.09868563438444,4.10100814965709,3.15363197293199,4.66828616977833,1.19060606211498,0,0,9.75953779039781,10.5528269290898,0.57423196411502,4.30761996159075,2.15471232685889,4.18051522804023,6.04872311423834,2.88249663851896,0,0,0,3.17736781726402,3.15845826181135,3.26670970019791,84.1248577781185,60.1628215283326,85.8578940117029,79.9994823722179,75.8180488303875,92.7324774289503,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,1.00669563634642,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.5995988691256,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,1.72084775396277,2.719885334831,7.55584468292944,3.89865850468601,1.34408066129201,5.75822122540183,0,0,0,0,0,0,0,0,0,0,3.9964357901671,10.3575153458869,0.890652834388949,0,0.304465478312141,0.230615497256059,0.60289056221049,0.823120949949934,0.628332956648377,1.73036477414062,1.3013942122792,4.42305275974937,0.970601099684455,2.20841518460394,3.87900202508178,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0.203678727700633,2.98576729464223,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.452114453507145,0.340182495756639,0,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,1.39300866608867,0.61734640922383,0,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0.180062061461015,1.42046841351126,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.583826711835847,0.987359099480883,1.64167464079095,2.83740833410495,3.07019973593198,3.95190207523891,3.62357330653004,0,0,1.65209391491899,4.7601101999438,0.213288250535234,0.232236671860439,0.128867461322093,1.61346819698674,1.77902435075896,2.28270751335071,5.69434873853414,5.76446341534038,7.79139147280835,7.36138946552258,8.57841983324129,2.69645822596266,3.6743468478698,5.17767310461355,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.442655759869801,1.03327103585722,0.627994911365499,0.616985819609003,1.48226313543574,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,2.87696137450811,2.10775794807546,5.76578967694971,4.31304619582064,7.81495990103857,7.80094182786401,3.53610429125956,4.84373016509163,1.92977408545347,4.0645701836653,0,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,1.10344600874334,0,1.75400245523236,1.96635977658886,4.14443956478149,2.16973587872267,4.52373851817817,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0.534196811001766,0.162886959353576,1.15479086080775,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.614870295887855,1.03371317267288,0,0.712994756769443,0.948110273807448,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0,0,2.11204537257339,5.08396970073168,0.441056796109924,2.4732937941222,0.968786560175433,2.11095237248546,2.74556391207214,3.93938159388147,6.70405924248657,0,6.83483523191411,5.15967169908056,2.59272338317596,3.39063222608444,3.8274383761887,7.0921233694022,0,0.139951452323658,0.967399816630967,0.954670618015114,0,0.406638934253697,1.29606408986162,1.88179466413022,1.74690050996942,1.61837215661785,3.30613822901344,1.83229159388821,3.24037433229482,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.774958940866387,0.675824501963113,1.17357238645754,1.0416350787516,0.104859344425711,0,0.288030006257865,1.58005560314089,1.01362607645082,0.102710957164827,0.649604114888975,0.895133478337407,0.993406773906324,1.08175904567972,0.738447635872886,1.21159739937777,1.06689529317,0.907435666231565,2.43644701849381,1.73181314952593,1.63627663054197,3.85441652145859,0.443971906748129,0,1.84673078000486,0.772758376128762,0.563047426353546,1.46521299413812,3.64426244434412,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,0.412070114477788,0,0,0,0.754505365544305,0.280924522409647,0.512201219238954,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,1.16965804222704,0.644613162144895,0.765153328275374,1.32354851471709,2.08681052058379|short_description=p5@Plbd1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66857
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=uniprot:Q8VCI0
|association_with_transcript=0bp_to_ENSMUST00000137139,NM_025806,uc009elz.2,uc009ema.2_5end
|cluster_id=chr6:136610392..136610415,-
|description=CAGE_peak_5_at_Plbd1_5end
|id=chr6:136610392..136610415,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.54e-14!130;UBERON:0000925!1.54e-14!130;UBERON:0006595!1.54e-14!130;UBERON:0001007!1.01e-13!128;UBERON:0001555!1.01e-13!128;UBERON:0007026!1.01e-13!128;UBERON:0004921!1.19e-12!126;UBERON:0004185!1.19e-12!126;UBERON:0004923!1.08e-11!24;UBERON:0005409!2.06e-10!59;UBERON:0000926!3.86e-08!193;UBERON:0004120!3.86e-08!193;UBERON:0006603!3.86e-08!193;UBERON:0002405!8.36e-08!70;UBERON:0000344!8.99e-08!15;UBERON:0000160!9.65e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.27e-19,118;UBERON:0000925,9.27e-19,118;UBERON:0006595,9.27e-19,118;UBERON:0005409,4.16e-18,47;UBERON:0001007,1.16e-17,116;UBERON:0001555,1.16e-17,116;UBERON:0007026,1.16e-17,116;UBERON:0004921,3.30e-16,114;UBERON:0004923,2.48e-15,24;UBERON:0000160,9.83e-14,31;UBERON:0000344,5.24e-10,15;UBERON:0001242,2.99e-08,13;UBERON:0001262,2.99e-08,13;UBERON:0004786,2.99e-08,13
|phase1_expression=0.320297694209588,3.48975407639361,5.91499011206397,4.83942738090928,3.50627010962443,3.18970616632591,1.40167584357315,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,2.99798785634096,2.42970320867791,2.09868563438444,4.10100814965709,3.15363197293199,4.66828616977833,1.19060606211498,0,0,9.75953779039781,10.5528269290898,0.57423196411502,4.30761996159075,2.15471232685889,4.18051522804023,6.04872311423834,2.88249663851896,0,0,0,3.17736781726402,3.15845826181135,3.26670970019791,84.1248577781185,60.1628215283326,85.8578940117029,79.9994823722179,75.8180488303875,92.7324774289503,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,1.00669563634642,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.5995988691256,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,1.72084775396277,2.719885334831,7.55584468292944,3.89865850468601,1.34408066129201,5.75822122540183,0,0,0,0,0,0,0,0,0,0,3.9964357901671,10.3575153458869,0.890652834388949,0,0.304465478312141,0.230615497256059,0.60289056221049,0.823120949949934,0.628332956648377,1.73036477414062,1.3013942122792,4.42305275974937,0.970601099684455,2.20841518460394,3.87900202508178,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0.203678727700633,2.98576729464223,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.452114453507145,0.340182495756639,0,0,0,0,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,1.39300866608867,0.61734640922383,0,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0.180062061461015,1.42046841351126,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.583826711835847,0.987359099480883,1.64167464079095,2.83740833410495,3.07019973593198,3.95190207523891,3.62357330653004,0,0,1.65209391491899,4.7601101999438,0.213288250535234,0.232236671860439,0.128867461322093,1.61346819698674,1.77902435075896,2.28270751335071,5.69434873853414,5.76446341534038,7.79139147280835,7.36138946552258,8.57841983324129,2.69645822596266,3.6743468478698,5.17767310461355,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.442655759869801,1.03327103585722,0.627994911365499,0.616985819609003,1.48226313543574,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,2.87696137450811,2.10775794807546,5.76578967694971,4.31304619582064,7.81495990103857,7.80094182786401,3.53610429125956,4.84373016509163,1.92977408545347,4.0645701836653,0,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,1.10344600874334,0,1.75400245523236,1.96635977658886,4.14443956478149,2.16973587872267,4.52373851817817,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0.534196811001766,0.162886959353576,1.15479086080775,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.614870295887855,1.03371317267288,0,0.712994756769443,0.948110273807448,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0,0,2.11204537257339,5.08396970073168,0.441056796109924,2.4732937941222,0.968786560175433,2.11095237248546,2.74556391207214,3.93938159388147,6.70405924248657,0,6.83483523191411,5.15967169908056,2.59272338317596,3.39063222608444,3.8274383761887,7.0921233694022,0,0.139951452323658,0.967399816630967,0.954670618015114,0,0.406638934253697,1.29606408986162,1.88179466413022,1.74690050996942,1.61837215661785,3.30613822901344,1.83229159388821,3.24037433229482,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.774958940866387,0.675824501963113,1.17357238645754,1.0416350787516,0.104859344425711,0,0.288030006257865,1.58005560314089,1.01362607645082,0.102710957164827,0.649604114888975,0.895133478337407,0.993406773906324,1.08175904567972,0.738447635872886,1.21159739937777,1.06689529317,0.907435666231565,2.43644701849381,1.73181314952593,1.63627663054197,3.85441652145859,0.443971906748129,0,1.84673078000486,0.772758376128762,0.563047426353546,1.46521299413812,3.64426244434412,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.367687016900028,1.11123363900808,0.412070114477788,0,0,0,0.754505365544305,0.280924522409647,0.512201219238954,0.516919220600519,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,1.16965804222704,0.644613162144895,0.765153328275374,1.32354851471709,2.08681052058379
|short_description=p5@Plbd1
}}

Revision as of 08:05, 5 August 2015

Short description:p5@Plbd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Plbd1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000137139, NM_025806, uc009elz.2, uc009ema.2_5end
EntrezGene:66857
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Plbd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.55
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G884.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H385.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G980.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H275.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H492.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.27e-19118
endoderm9.27e-19118
presumptive endoderm9.27e-19118
gastrointestinal system4.16e-1847
digestive system1.16e-17116
digestive tract1.16e-17116
primitive gut1.16e-17116
subdivision of digestive tract3.30e-16114
organ component layer2.48e-1524
intestine9.83e-1431
mucosa5.24e-1015
intestinal mucosa2.99e-0813
wall of intestine2.99e-0813
gastrointestinal system mucosa2.99e-0813
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:136610392..136610415,-&oldid=3877091"