FFCP PHASE1:Mm9::chr6:29685667..29685680,+: Difference between revisions
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{{FFCP|EntrezGene=319757|HGNC=|MCL_coexpression_id=1402|UniProt=P56726,Q4VBD5|association_with_transcript=-13bp_to_ENSMUST00000001812_5end|description=CAGE_peak_3_at_Smo_5end|id=chr6:29685667..29685680,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.55e-08,7;UBERON:0004710,1.55e-08,7;UBERON:0005419,1.55e-08,7;UBERON:0005417,1.55e-08,7;UBERON:0005729,1.55e-08,7;UBERON:0010708,3.06e-07,8;UBERON:0000991,4.01e-07,18;UBERON:0005564,4.01e-07,18|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.202753862439029,1.46837401729345,0,2.18025156380447,1.09843091367236,0.777719596297134,1.95980990275508,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,0.528990979272033,0,2.03306719241479,2.66788438833342,0,0,0,0.898800331555214,2.68952813725088,0.518448061542388,0.270011876663381,1.68259969081106,0.571301968807607,0.883474163806454,0.979926393719632,0.670918297127655,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.30559649555362,0,0.711858403995515,0.559198337475902,0.302904773332736,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,2.21559419351475,0.259786004602869,0,1.97180787687353,0,0,0,0,0.253359865475099,0,0,0,0.593768556259299,3.81667718885499,0.304465478312141,1.38369298353635,0.60289056221049,1.29347577849275,0.502666365318702,0,0,0,2.26473589926373,0.883366073841574,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,0,0.381210681219194,0,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0.162241263067758,3.56437773476107,0.373220911830279,0.252722758433675,0,2.34216797332867,2.98872735763515,1.98068342785884,1.35634336052144,1.08858398642125,1.15302348256365,1.3118241438362,0,2.80238390812695,4.72765200419548,4.22282697993477,4.3839146485515,3.61461423993277,2.78601733217733,1.02891068203972,3.38358253591438,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0.930135779001631,1.07309360559848,0.233530684734339,0.329119699826961,0.164167464079095,0.486412857275134,0.292399974850665,0,0.134206418760372,0,1.3377599609307,0,0,3.83918850963421,2.32236671860439,1.54640953586512,2.01683524623343,0.667134131534611,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,2.46568271239006,2.05647322697512,0,2.24016460629846,2.13347735884388,1.54298803758701,1.26473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,2.65287976478679,1.30371981153621,1.69745085775188,2.58159273117352,0.335012514883631,0.476087281772027,0.975668239288994,0.472905432318573,0.8858587585951,1.43509291791738,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,2.45902418065013,0.504941854408746,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,0.849229592366497,0,0,1.58115111178609,0,0.851640511249612,4.27357448801413,3.90928702448583,1.15479086080775,0,1.45668381692989,2.41858845571801,0.565815239267694,1.18120757152309,0.922305443831782,0.516856586336442,1.45413491791002,0.712994756769443,0,0,0,0.680879211507576,1.44048875225048,1.81102157295856,2.35770738534752,1.41872186913819,0.891844088010353,2.30368628842969,1.522324745573,0,0,0,0.49465875882444,0.484393280087717,1.26657142349127,0.358117032009409,0.492422699235184,0,0,0,4.33412422722767,0.925972636848558,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0.690999869022119,0,2.37251995185852,2.84647253977588,0.972048067396211,0.836353184057875,1.31017538247707,0.539457385539283,0.743881101528023,0.26175594198403,0,0,0,2.39226473670366,2.15096037594227,3.50012139019286,3.35815541042101,1.85851738039856,3.28600268208111,1.43224823328345,1.04859344425711,0.241584120826006,0,0,2.43270258348197,1.23253148597793,0.77952493786677,0.716106782669926,0.596044064343795,0.841368146639782,0.738447635872886,0.302899349844443,0.609654453239999,0.705783295957884,0,0.192423683280659,0.350630706544707,0,0.221985953374065,0,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.518936737920883,0.798049746802062,1.70733605754134,1.70174701947806,0.209613162627982,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,0.943131706930381,1.591905626988,1.15245274328765,1.03383844120104,1.90517476513229,1.0429589335037,1.73618298417335,0.412085900803307,0.441596760403192,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0.679020569229309,0,1.06771516311757,0.985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,2.24829520144151,2.10538447600868,0,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p3@Smo}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319757 | |||
|HGNC= | |||
|MCL_coexpression_id=1402 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P56726,uniprot:Q4VBD5 | |||
|association_with_transcript=-13bp_to_ENSMUST00000001812_5end | |||
|cluster_id=chr6:29685667..29685680,+ | |||
|description=CAGE_peak_3_at_Smo_5end | |||
|id=chr6:29685667..29685680,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.55e-08,7;UBERON:0004710,1.55e-08,7;UBERON:0005419,1.55e-08,7;UBERON:0005417,1.55e-08,7;UBERON:0005729,1.55e-08,7;UBERON:0010708,3.06e-07,8;UBERON:0000991,4.01e-07,18;UBERON:0005564,4.01e-07,18 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.202753862439029,1.46837401729345,0,2.18025156380447,1.09843091367236,0.777719596297134,1.95980990275508,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,0.528990979272033,0,2.03306719241479,2.66788438833342,0,0,0,0.898800331555214,2.68952813725088,0.518448061542388,0.270011876663381,1.68259969081106,0.571301968807607,0.883474163806454,0.979926393719632,0.670918297127655,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.30559649555362,0,0.711858403995515,0.559198337475902,0.302904773332736,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,2.21559419351475,0.259786004602869,0,1.97180787687353,0,0,0,0,0.253359865475099,0,0,0,0.593768556259299,3.81667718885499,0.304465478312141,1.38369298353635,0.60289056221049,1.29347577849275,0.502666365318702,0,0,0,2.26473589926373,0.883366073841574,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,0,0.381210681219194,0,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0.162241263067758,3.56437773476107,0.373220911830279,0.252722758433675,0,2.34216797332867,2.98872735763515,1.98068342785884,1.35634336052144,1.08858398642125,1.15302348256365,1.3118241438362,0,2.80238390812695,4.72765200419548,4.22282697993477,4.3839146485515,3.61461423993277,2.78601733217733,1.02891068203972,3.38358253591438,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0.930135779001631,1.07309360559848,0.233530684734339,0.329119699826961,0.164167464079095,0.486412857275134,0.292399974850665,0,0.134206418760372,0,1.3377599609307,0,0,3.83918850963421,2.32236671860439,1.54640953586512,2.01683524623343,0.667134131534611,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,2.46568271239006,2.05647322697512,0,2.24016460629846,2.13347735884388,1.54298803758701,1.26473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,2.65287976478679,1.30371981153621,1.69745085775188,2.58159273117352,0.335012514883631,0.476087281772027,0.975668239288994,0.472905432318573,0.8858587585951,1.43509291791738,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,2.45902418065013,0.504941854408746,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,0.849229592366497,0,0,1.58115111178609,0,0.851640511249612,4.27357448801413,3.90928702448583,1.15479086080775,0,1.45668381692989,2.41858845571801,0.565815239267694,1.18120757152309,0.922305443831782,0.516856586336442,1.45413491791002,0.712994756769443,0,0,0,0.680879211507576,1.44048875225048,1.81102157295856,2.35770738534752,1.41872186913819,0.891844088010353,2.30368628842969,1.522324745573,0,0,0,0.49465875882444,0.484393280087717,1.26657142349127,0.358117032009409,0.492422699235184,0,0,0,4.33412422722767,0.925972636848558,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0.690999869022119,0,2.37251995185852,2.84647253977588,0.972048067396211,0.836353184057875,1.31017538247707,0.539457385539283,0.743881101528023,0.26175594198403,0,0,0,2.39226473670366,2.15096037594227,3.50012139019286,3.35815541042101,1.85851738039856,3.28600268208111,1.43224823328345,1.04859344425711,0.241584120826006,0,0,2.43270258348197,1.23253148597793,0.77952493786677,0.716106782669926,0.596044064343795,0.841368146639782,0.738447635872886,0.302899349844443,0.609654453239999,0.705783295957884,0,0.192423683280659,0.350630706544707,0,0.221985953374065,0,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.518936737920883,0.798049746802062,1.70733605754134,1.70174701947806,0.209613162627982,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,0.943131706930381,1.591905626988,1.15245274328765,1.03383844120104,1.90517476513229,1.0429589335037,1.73618298417335,0.412085900803307,0.441596760403192,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0.679020569229309,0,1.06771516311757,0.985044823755635,0.818462086339379,0.619747364743864,0.771626443924566,2.24829520144151,2.10538447600868,0,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Smo | |||
}} |
Revision as of 13:05, 5 August 2015
Short description: | p3@Smo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Smo_5end |
Coexpression cluster: | MCL_coexpression_mm9:1402 |
Association with transcript: | -13bp_to_ENSMUST00000001812_5end |
EntrezGene: | 319757 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.55e-08 | 7 |
pectoral appendage | 1.55e-08 | 7 |
pectoral appendage bud | 1.55e-08 | 7 |
forelimb bud | 1.55e-08 | 7 |
forelimb/pectoral fin field | 1.55e-08 | 7 |
pectoral complex | 3.06e-07 | 8 |
gonad | 4.01e-07 | 18 |
gonad primordium | 4.01e-07 | 18 |