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FFCP PHASE1:Mm9::chr6:39068210..39068251,-: Difference between revisions

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{{FFCP|EntrezGene=243771|HGNC=|MCL_coexpression_id=1681|UniProt=Q8BZ20|association_with_transcript=96bp_to_ENSMUST00000038398,NM_172893,uc009blg.2_5end|description=CAGE_peak_1_at_Parp12_5end|id=chr6:39068210..39068251,-|ontology_enrichment_celltype=CL:0000066!6.23e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,5.89e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.99e-13!130;UBERON:0000925!1.99e-13!130;UBERON:0006595!1.99e-13!130;UBERON:0001007!5.52e-13!128;UBERON:0001555!5.52e-13!128;UBERON:0007026!5.52e-13!128;UBERON:0004921!2.60e-12!126;UBERON:0004185!2.60e-12!126;UBERON:0005409!5.67e-09!59;UBERON:0004923!1.05e-08!24;UBERON:0000160!1.72e-08!43;UBERON:0000344!1.80e-08!15;UBERON:0001242!7.10e-08!13;UBERON:0000060!7.10e-08!13;UBERON:0001262!7.10e-08!13;UBERON:0004786!7.10e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.52e-14,118;UBERON:0000925,2.52e-14,118;UBERON:0006595,2.52e-14,118;UBERON:0001007,7.08e-14,116;UBERON:0001555,7.08e-14,116;UBERON:0007026,7.08e-14,116;UBERON:0004921,3.51e-13,114;UBERON:0000160,7.05e-11,31;UBERON:0005409,1.45e-10,47;UBERON:0004923,9.78e-09,24;UBERON:0000344,1.67e-08,15;UBERON:0001242,6.64e-08,13;UBERON:0001262,6.64e-08,13;UBERON:0004786,6.64e-08,13|phase1_expression=1.92178616525753,44.6688521778382,52.7799117691862,38.4129548359674,48.5868858047957,17.2915650069246,9.1108929832255,2.84071311571468,0,0,0,0.0797721589953364,6.16322627752341,4.28359971853087,2.99798785634096,4.85940641735582,3.49780939064073,0.946386496074713,1.37114433605739,2.54633791078818,6.29320347117916,1.39007331681239,0.522399578277871,6.39969691173627,11.6998733344257,29.285830169866,27.9995297503399,19.39241094173,22.8028103347649,28.2273745331122,17.0732493204585,0,0,0,5.77703239502549,6.64938581433969,6.32925004413344,10.4632907684227,7.0320181007142,7.85285615960697,7.05877785637217,7.5135003345429,10.6812277666854,6.54663453473002,7.29913904780505,4.40512205188036,6.25913075478431,3.92445281484804,4.61340983742391,4.27745777963423,8.39918529752175,5.75010257459886,0.167782606057736,0,2.35265659399725,4.88792928468299,5.73066879877513,6.70373719960675,0.202316460859598,0.528990979272033,0,5.76035704517525,18.6751907183339,21.5975932147536,22.7439263390404,18.4724829885986,9.58720353658895,6.14749288514487,0.518448061542388,0.270011876663381,0,1.99955689082663,0.441737081903227,0.367472397644862,0.479227355091182,0,0,1.53224805702225,1.38245879930619,0.263772575460388,0.182975287204819,0,1.3959149950069,1.12552522006336,1.83357897332172,0,1.28134512719193,0.745597783301202,9.16286939331527,8.91744409260069,15.0729534124872,15.487629785665,3.39985666853875,8.63525106620507,8.4470934268197,9.85659151614138,7.72444310724635,7.15807354827843,4.41636207824877,6.36011234118612,2.25349471642689,5.13305909657271,5.09610479413291,14.2213340630666,4.5463118612355,3.54703811665138,1.51657333504435,10.1623652949963,3.36619248741323,7.12522267511159,1.38788261412909,2.43572382649713,5.5347719341454,6.33035090321015,5.05631440683531,7.53999547978053,14.0901131608593,7.80836527367523,4.42305275974937,3.558870698843,2.20841518460394,5.81850303762267,9.31958806090611,3.22058876712702,0.83778682725382,18.9038220854358,1.91704199209472,1.19980546198682,1.77898317902291,1.04853447583376,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,1.24672826735736,1.46017136760982,6.31404055871961,4.10543003013307,5.81262344397452,5.26104639716185,0.650602214813519,0.919608417733892,0.720248519221397,0.30140963567143,2.24520447199382,2.17793324484245,2.62364828767241,2.84573707812917,0.431135985865684,0.567318240503458,0.879755620819744,1.97276159184817,1.11218899690239,1.0447564995665,1.85203922767149,2.18937693500343,0.702213187313235,0.772043721344145,0.568326998791185,1.24275463521301,0.938104239924385,1.80062061461015,0.473489471170421,2.36117078096885,1.54267112887378,2.55787339225449,1.87791380979733,5.13767506415546,3.94943639792353,4.26835406605648,4.37771571547621,4.9707995724613,5.92785311285837,6.03928884421673,0.841159794256509,1.85228302282712,40.6415103070072,16.1314845664762,1.70630600428187,1.62565670302307,2.06187938115349,2.42020229548011,3.7804267453628,3.61428689613862,18.506633400236,9.0584425098206,12.3154252312132,9.74886713001639,14.4273424468149,24.268124033664,19.2362864388478,21.706398784726,1.51734320762465,1.37098215131675,2.25415471346161,1.83286195060783,3.49114476901726,4.41855665309007,4.61626721007078,4.13308414342886,4.23896565171712,3.82531208157582,10.9687472022245,0.333690211432188,1.57247196090562,0.899448449539415,2.02860121388503,1.92941727801933,1.52775511068852,6.32931502391783,6.48540907100142,8.23684239564244,18.6898668485561,15.2577788544086,11.8574315783533,18.4382580901392,15.9663698034502,14.473305640901,16.812540305161,1.32643988239339,1.30371981153621,1.18821560042632,1.40814148973101,3.68513766371995,9.28370199455454,10.9274842800367,5.67486518782288,8.41565820665345,11.48074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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:243771
|HGNC=
|MCL_coexpression_id=1681
|TSSclassifier=NA
|UniProt=uniprot:Q8BZ20
|association_with_transcript=96bp_to_ENSMUST00000038398,NM_172893,uc009blg.2_5end
|cluster_id=chr6:39068210..39068251,-
|description=CAGE_peak_1_at_Parp12_5end
|id=chr6:39068210..39068251,-
|ontology_enrichment_celltype=CL:0000066!6.23e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,5.89e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.99e-13!130;UBERON:0000925!1.99e-13!130;UBERON:0006595!1.99e-13!130;UBERON:0001007!5.52e-13!128;UBERON:0001555!5.52e-13!128;UBERON:0007026!5.52e-13!128;UBERON:0004921!2.60e-12!126;UBERON:0004185!2.60e-12!126;UBERON:0005409!5.67e-09!59;UBERON:0004923!1.05e-08!24;UBERON:0000160!1.72e-08!43;UBERON:0000344!1.80e-08!15;UBERON:0001242!7.10e-08!13;UBERON:0000060!7.10e-08!13;UBERON:0001262!7.10e-08!13;UBERON:0004786!7.10e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.52e-14,118;UBERON:0000925,2.52e-14,118;UBERON:0006595,2.52e-14,118;UBERON:0001007,7.08e-14,116;UBERON:0001555,7.08e-14,116;UBERON:0007026,7.08e-14,116;UBERON:0004921,3.51e-13,114;UBERON:0000160,7.05e-11,31;UBERON:0005409,1.45e-10,47;UBERON:0004923,9.78e-09,24;UBERON:0000344,1.67e-08,15;UBERON:0001242,6.64e-08,13;UBERON:0001262,6.64e-08,13;UBERON:0004786,6.64e-08,13
|phase1_expression=1.92178616525753,44.6688521778382,52.7799117691862,38.4129548359674,48.5868858047957,17.2915650069246,9.1108929832255,2.84071311571468,0,0,0,0.0797721589953364,6.16322627752341,4.28359971853087,2.99798785634096,4.85940641735582,3.49780939064073,0.946386496074713,1.37114433605739,2.54633791078818,6.29320347117916,1.39007331681239,0.522399578277871,6.39969691173627,11.6998733344257,29.285830169866,27.9995297503399,19.39241094173,22.8028103347649,28.2273745331122,17.0732493204585,0,0,0,5.77703239502549,6.64938581433969,6.32925004413344,10.4632907684227,7.0320181007142,7.85285615960697,7.05877785637217,7.5135003345429,10.6812277666854,6.54663453473002,7.29913904780505,4.40512205188036,6.25913075478431,3.92445281484804,4.61340983742391,4.27745777963423,8.39918529752175,5.75010257459886,0.167782606057736,0,2.35265659399725,4.88792928468299,5.73066879877513,6.70373719960675,0.202316460859598,0.528990979272033,0,5.76035704517525,18.6751907183339,21.5975932147536,22.7439263390404,18.4724829885986,9.58720353658895,6.14749288514487,0.518448061542388,0.270011876663381,0,1.99955689082663,0.441737081903227,0.367472397644862,0.479227355091182,0,0,1.53224805702225,1.38245879930619,0.263772575460388,0.182975287204819,0,1.3959149950069,1.12552522006336,1.83357897332172,0,1.28134512719193,0.745597783301202,9.16286939331527,8.91744409260069,15.0729534124872,15.487629785665,3.39985666853875,8.63525106620507,8.4470934268197,9.85659151614138,7.72444310724635,7.15807354827843,4.41636207824877,6.36011234118612,2.25349471642689,5.13305909657271,5.09610479413291,14.2213340630666,4.5463118612355,3.54703811665138,1.51657333504435,10.1623652949963,3.36619248741323,7.12522267511159,1.38788261412909,2.43572382649713,5.5347719341454,6.33035090321015,5.05631440683531,7.53999547978053,14.0901131608593,7.80836527367523,4.42305275974937,3.558870698843,2.20841518460394,5.81850303762267,9.31958806090611,3.22058876712702,0.83778682725382,18.9038220854358,1.91704199209472,1.19980546198682,1.77898317902291,1.04853447583376,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,1.24672826735736,1.46017136760982,6.31404055871961,4.10543003013307,5.81262344397452,5.26104639716185,0.650602214813519,0.919608417733892,0.720248519221397,0.30140963567143,2.24520447199382,2.17793324484245,2.62364828767241,2.84573707812917,0.431135985865684,0.567318240503458,0.879755620819744,1.97276159184817,1.11218899690239,1.0447564995665,1.85203922767149,2.18937693500343,0.702213187313235,0.772043721344145,0.568326998791185,1.24275463521301,0.938104239924385,1.80062061461015,0.473489471170421,2.36117078096885,1.54267112887378,2.55787339225449,1.87791380979733,5.13767506415546,3.94943639792353,4.26835406605648,4.37771571547621,4.9707995724613,5.92785311285837,6.03928884421673,0.841159794256509,1.85228302282712,40.6415103070072,16.1314845664762,1.70630600428187,1.62565670302307,2.06187938115349,2.42020229548011,3.7804267453628,3.61428689613862,18.506633400236,9.0584425098206,12.3154252312132,9.74886713001639,14.4273424468149,24.268124033664,19.2362864388478,21.706398784726,1.51734320762465,1.37098215131675,2.25415471346161,1.83286195060783,3.49114476901726,4.41855665309007,4.61626721007078,4.13308414342886,4.23896565171712,3.82531208157582,10.9687472022245,0.333690211432188,1.57247196090562,0.899448449539415,2.02860121388503,1.92941727801933,1.52775511068852,6.32931502391783,6.48540907100142,8.23684239564244,18.6898668485561,15.2577788544086,11.8574315783533,18.4382580901392,15.9663698034502,14.473305640901,16.812540305161,1.32643988239339,1.30371981153621,1.18821560042632,1.40814148973101,3.68513766371995,9.28370199455454,10.9274842800367,5.67486518782288,8.41565820665345,11.4807433433391,12.1258852889646,15.7143333497965,14.6095549167327,24.1266054302836,27.7391898747542,6.39293554924747,4.69092468718045,1.9266070798535,1.64096361229084,2.45902418065013,3.7870639080656,4.41711507182759,2.34263246577983,2.58508077279359,3.34556317133573,3.56477878531831,2.26461224631066,4.04810701674894,4.38383786866968,1.18586333383957,2.24924921495265,7.66476460124651,6.41036173202119,6.35259141478947,8.90838664051691,1.32745138339963,1.45668381692989,1.81394134178851,3.01768127609437,3.2483208216885,3.07435147943927,10.8539883130653,3.63533729477506,4.63446591900138,4.42451461110142,6.32511651449993,2.06271086496374,9.19186935535228,1.44048875225048,1.4229455216103,1.50035924522115,2.12808280370728,1.78368817602071,3.1264313914403,4.56697423671899,6.57080782578389,5.08396970073168,3.52845436887939,4.78170133530292,5.00539722757307,3.1362720962641,2.50681922406587,2.79039529566604,18.9462543809403,1.48340241608408,5.29699730473343,5.36605856704379,6.85219751267933,3.39063222608444,2.1871076435364,6.17701067657611,5.26933132980952,7.69732987780119,5.8043988997858,5.72802370809068,0.474503990371703,3.04979200690273,3.88819226958485,2.50905955217362,5.02233896616208,4.5853877770839,7.60411792673091,6.54389854960074,12.1838074894285,6.21339313086926,2.25477175473676,2.8408143748356,2.64733584731356,2.52786544847262,2.84151611651008,3.21016638432478,4.5769323071844,4.6873578543822,4.19437377702843,1.20792060413003,2.30424005006292,2.8441000856536,1.62180172232131,3.49217254360413,5.3267537420896,3.22248052201467,4.17230845040656,5.16840432935866,3.10148007066612,4.13962444787405,3.88654713940499,3.32726410951574,4.58052039476836,4.2333210321745,3.3894301632655,4.76133805591944,1.99787358036658,0.0897138566094757,0.167884616364078,7.53439416725543,8.82107634620555,12.0880072016395,3.64426244434412,5.517293144389,0,0.920650473014354,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.682934423016537,1.45864030240976,1.25767897576789,2.02227859295016,2.00022055021454,1.85431551515005,0.64183841918363,1.51618327058278,1.2673964994512,2.07488975524684,3.55837728385553,2.36893063898016,2.64203157195821,0.476293691283074,2.54945517078682,1.54327376370964,2.88460130562315,2.94397840268795,1.37147700954166,1.06485483695602,2.14592570952589,1.45346416632329,2.54095327121393,3.9768865709088,2.37806364734604,1.57841826862706,3.53090695999241,1.12228454331548,2.49133538060766,3.05363895364247,1.63692417267876,4.18329471202108,1.54325288784913,1.49886346762768,1.87145286756327,3.43793686477277,3.63447830930802,5.29419405886837,3.2461496986859
|short_description=p1@Parp12
}}

Revision as of 16:19, 5 August 2015

Short description:p1@Parp12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Parp12_5end
Coexpression cluster:MCL_coexpression_mm9:1681
Association with transcript: 96bp_to_ENSMUST00000038398, NM_172893, uc009blg.2_5end
EntrezGene:243771
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Parp12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I544.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I652.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I448.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.29
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H929.29
GP2+ M cell, pool2.CNhs13231.11846-124I128.00
GP2+ M cell, pool3.CNhs13240.11847-124I219.39
Ileum epithelium, pool1.CNhs13199.10252-104B922.80
Ileum epithelium, pool2.CNhs13232.10253-104C128.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D99.16
Mouse Schwann, donor2.CNhs12573.11746-123F98.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.16
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I37.54
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H718.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G14.38
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I340.64
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D118.51
intestine, neonate N01.CNhs11192.1322-23E99.06
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A514.43
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G121.71
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A318.44
liver, neonate N25.CNhs11198.1368-26H115.97
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A412.13
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.74
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G910.85
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H33.14
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C15.37
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I112.18
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F85.17
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.14
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B43.25





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.89e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.52e-14118
endoderm2.52e-14118
presumptive endoderm2.52e-14118
digestive system7.08e-14116
digestive tract7.08e-14116
primitive gut7.08e-14116
subdivision of digestive tract3.51e-13114
intestine7.05e-1131
gastrointestinal system1.45e-1047
organ component layer9.78e-0924
mucosa1.67e-0815
intestinal mucosa6.64e-0813
wall of intestine6.64e-0813
gastrointestinal system mucosa6.64e-0813
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