FFCP PHASE1:Mm9::chr6:48857811..48857820,+: Difference between revisions
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{{FFCP|EntrezGene=76507|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=457bp_to_ENSMUST00000161184_5end|description=CAGE_peak_9_at_Abp1_5end|id=chr6:48857811..48857820,+|ontology_enrichment_celltype=CL:0000239!1.44e-08!6;CL:0000677!1.44e-08!6;CL:0000212!1.44e-08!6;CL:0000584!1.44e-08!6;CL:0000075!2.39e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,4.19e-09,6;CL:0000677,4.19e-09,6;CL:0000584,4.19e-09,6;CL:0000075,6.16e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.89e-14!24;UBERON:0005795!1.02e-13!4;UBERON:0000995!1.02e-13!4;UBERON:0000160!3.27e-13!43;UBERON:0000474!7.90e-13!9;UBERON:0000344!1.15e-12!15;UBERON:0003975!5.51e-11!5;UBERON:0005631!1.04e-10!3;UBERON:0000478!1.04e-10!3;UBERON:0000158!1.04e-10!3;UBERON:0003100!2.24e-10!11;UBERON:0003134!2.66e-10!8;UBERON:0005409!4.00e-10!59;UBERON:0001242!2.70e-08!13;UBERON:0000060!2.70e-08!13;UBERON:0001262!2.70e-08!13;UBERON:0004786!2.70e-08!13;UBERON:0001987!4.72e-08!2;UBERON:0003124!4.72e-08!2;UBERON:0004340!4.72e-08!2;UBERON:0001962!9.31e-08!2;UBERON:0001961!9.31e-08!2;UBERON:0001744!9.31e-08!2;UBERON:0007023!5.83e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.12e-29,4;UBERON:0000995,3.12e-29,4;UBERON:0001987,2.38e-26,2;UBERON:0003124,2.38e-26,2;UBERON:0004340,2.38e-26,2;UBERON:0003975,1.45e-23,5;UBERON:0004923,7.18e-19,24;UBERON:0005631,6.07e-18,3;UBERON:0000478,6.07e-18,3;UBERON:0000158,6.07e-18,3;UBERON:0003134,4.93e-15,8;UBERON:0006834,4.85e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0000344,1.31e-13,15;UBERON:0004175,1.90e-13,9;UBERON:0000474,1.90e-13,9;UBERON:0003100,3.92e-11,11;UBERON:0001242,3.27e-09,13;UBERON:0001262,3.27e-09,13;UBERON:0004786,3.27e-09,13;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2|phase1_expression=0,0,0,1.20985684522732,1.00179145989269,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,0,0.430761996159075,0.430942465371778,1.90023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6299483837727,2.54198485036584,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81815673898664,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p9@Abp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76507 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=457bp_to_ENSMUST00000161184_5end | |||
|cluster_id=chr6:48857811..48857820,+ | |||
|description=CAGE_peak_9_at_Abp1_5end | |||
|id=chr6:48857811..48857820,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.44e-08!6;CL:0000677!1.44e-08!6;CL:0000212!1.44e-08!6;CL:0000584!1.44e-08!6;CL:0000075!2.39e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.19e-09,6;CL:0000677,4.19e-09,6;CL:0000584,4.19e-09,6;CL:0000075,6.16e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.89e-14!24;UBERON:0005795!1.02e-13!4;UBERON:0000995!1.02e-13!4;UBERON:0000160!3.27e-13!43;UBERON:0000474!7.90e-13!9;UBERON:0000344!1.15e-12!15;UBERON:0003975!5.51e-11!5;UBERON:0005631!1.04e-10!3;UBERON:0000478!1.04e-10!3;UBERON:0000158!1.04e-10!3;UBERON:0003100!2.24e-10!11;UBERON:0003134!2.66e-10!8;UBERON:0005409!4.00e-10!59;UBERON:0001242!2.70e-08!13;UBERON:0000060!2.70e-08!13;UBERON:0001262!2.70e-08!13;UBERON:0004786!2.70e-08!13;UBERON:0001987!4.72e-08!2;UBERON:0003124!4.72e-08!2;UBERON:0004340!4.72e-08!2;UBERON:0001962!9.31e-08!2;UBERON:0001961!9.31e-08!2;UBERON:0001744!9.31e-08!2;UBERON:0007023!5.83e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.12e-29,4;UBERON:0000995,3.12e-29,4;UBERON:0001987,2.38e-26,2;UBERON:0003124,2.38e-26,2;UBERON:0004340,2.38e-26,2;UBERON:0003975,1.45e-23,5;UBERON:0004923,7.18e-19,24;UBERON:0005631,6.07e-18,3;UBERON:0000478,6.07e-18,3;UBERON:0000158,6.07e-18,3;UBERON:0003134,4.93e-15,8;UBERON:0006834,4.85e-14,1;UBERON:0003199,1.16e-13,1;UBERON:0000344,1.31e-13,15;UBERON:0004175,1.90e-13,9;UBERON:0000474,1.90e-13,9;UBERON:0003100,3.92e-11,11;UBERON:0001242,3.27e-09,13;UBERON:0001262,3.27e-09,13;UBERON:0004786,3.27e-09,13;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2 | |||
|phase1_expression=0,0,0,1.20985684522732,1.00179145989269,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,0,0.430761996159075,0.430942465371778,1.90023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6299483837727,2.54198485036584,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81815673898664,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p9@Abp1 | |||
}} |
Revision as of 20:53, 5 August 2015
Short description: | p9@Abp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Abp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 457bp_to_ENSMUST00000161184_5end |
EntrezGene: | 76507 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.19e-09 | 6 |
gut absorptive cell | 4.19e-09 | 6 |
enterocyte | 4.19e-09 | 6 |
columnar/cuboidal epithelial cell | 6.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 3.12e-29 | 4 |
uterus | 3.12e-29 | 4 |
placenta | 2.38e-26 | 2 |
chorion | 2.38e-26 | 2 |
allantois | 2.38e-26 | 2 |
internal female genitalia | 1.45e-23 | 5 |
organ component layer | 7.18e-19 | 24 |
extraembryonic membrane | 6.07e-18 | 3 |
extraembryonic structure | 6.07e-18 | 3 |
membranous layer | 6.07e-18 | 3 |
female reproductive organ | 4.93e-15 | 8 |
uterus or analog | 4.85e-14 | 1 |
egg chamber | 1.16e-13 | 1 |
mucosa | 1.31e-13 | 15 |
internal genitalia | 1.90e-13 | 9 |
female reproductive system | 1.90e-13 | 9 |
female organism | 3.92e-11 | 11 |
intestinal mucosa | 3.27e-09 | 13 |
wall of intestine | 3.27e-09 | 13 |
gastrointestinal system mucosa | 3.27e-09 | 13 |
gut-associated lymphoid tissue | 1.76e-07 | 2 |
mucosa-associated lymphoid tissue | 1.76e-07 | 2 |
lymphoid tissue | 1.76e-07 | 2 |