FFCP PHASE1:Hg19::chrX:48661147..48661161,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14064 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000468949,uc011mmk.1_5end | |||
|description=CAGE_peak_11_at_HDAC6_5end | |||
|id=chrX:48661147..48661161,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.38e-07;3!CL:0002577;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.80e-16;10!UBERON:0005564;9.80e-16;10!UBERON:0007297;1.38e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.42e-24;11!UBERON:0000473;1.71e-19;8!UBERON:0001301;8.01e-18;1!UBERON:0003101;1.76e-12;22!UBERON:0000079;1.76e-12;22!UBERON:0001897;1.38e-09;2!UBERON:0010225;1.38e-09;2!UBERON:0000991;8.36e-08;21!UBERON:0003124;8.38e-07;3!UBERON:0000920;8.38e-07;3!UBERON:0006947;8.38e-07;3!UBERON:0004054;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.71e-24,11;UBERON:0000473,2.00e-19,8;UBERON:0001301,8.72e-18,1;UBERON:0003101,1.92e-12,22;UBERON:0000079,1.92e-12,22;UBERON:0003124,2.04e-10,7;UBERON:0001897,1.03e-09,2;UBERON:0010225,1.03e-09,2;UBERON:0005103,3.14e-09,8;UBERON:0000083,3.14e-09,8;UBERON:0009201,3.14e-09,8;UBERON:0006553,3.14e-09,8;UBERON:0003074,3.14e-09,8;UBERON:0003060,3.14e-09,8;UBERON:0003133,9.74e-09,48;UBERON:0000080,2.65e-08,9;UBERON:0002120,2.65e-08,9;UBERON:0004875,2.65e-08,9;UBERON:0005721,2.65e-08,9;UBERON:0005754,2.65e-08,9;UBERON:0007297,2.65e-08,9;UBERON:0000991,8.87e-08,21;UBERON:0009196,8.87e-08,21;UBERON:0009117,8.87e-08,21;UBERON:0005564,8.87e-08,21;UBERON:0003886,9.56e-08,54;UBERON:0004176,1.89e-07,22;UBERON:0005156,4.19e-07,59;UBERON:0000990,4.19e-07,59;UBERON:0004876,5.98e-07,11;UBERON:0002553,7.48e-07,61;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,1.39560233594486,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.410623275218653,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.75374599577023,0,0,0,0,0.316462387440884,0,0.425208599930087,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.668745981562712,0.651844533267181,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,1.37528029272598,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0.431428401637234,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,1.03041011647722,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0.170453254832202,0,0,0.384380134730212,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,1.11362469558097,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.230850775511391,0.341826167541004,0,0.269272933229316,0.108647371922008,0.638002319463839,0.183195186803725,1.06606955203727,0,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0,0.282706142867882,0,0,0.707660516026713,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0,0,0.240476460754601,0.213452994739353,0,0,0,0.171594997861965,0.432164393964449,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.247247575143499,0.0674035438541849,0,0,0,0,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,1.61207457045891,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0,0,0.366078794705889,0.250381861413,0,0,0,0.138348634936231,0,0,0,0.470531639396343,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.604923695052956,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0.389720617678777,0,0.163565394255844,0.655219697692825,0,0,0.19998739585493,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0.47775168788705,0.214429632529969,0,0.464965701472501,0,0,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.410651227424988,0,0,0.233939463462106,0.198950775161368,0.237840181555137,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0,0.299823467774787,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,1.06886962106224,0.18378979906969,0,4.31938579843965,2.41167717140561,1.65833887891756,0,0,0.23806443146374,0.516711278688049,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p11@HDAC6 | |||
}} |
Revision as of 05:36, 23 January 2014
Short description: | p11@HDAC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HDAC6_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000468949, uc011mmk.1_5end |
EntrezGene: | HDAC6 |
HGNC: | 14064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.71e-24 | 11 |
testis | 2.00e-19 | 8 |
epididymis | 8.72e-18 | 1 |
male organism | 1.92e-12 | 22 |
male reproductive system | 1.92e-12 | 22 |
chorion | 2.04e-10 | 7 |
dorsal plus ventral thalamus | 1.03e-09 | 2 |
thalamic complex | 1.03e-09 | 2 |
mesonephric epithelium | 3.14e-09 | 8 |
mesonephric tubule | 3.14e-09 | 8 |
nephric duct | 3.14e-09 | 8 |
renal duct | 3.14e-09 | 8 |
mesonephric duct | 3.14e-09 | 8 |
pronephric duct | 3.14e-09 | 8 |
reproductive organ | 9.74e-09 | 48 |
mesonephros | 2.65e-08 | 9 |
pronephros | 2.65e-08 | 9 |
nephrogenic cord | 2.65e-08 | 9 |
pronephric mesoderm | 2.65e-08 | 9 |
rostral part of nephrogenic cord | 2.65e-08 | 9 |
presumptive pronephric mesoderm | 2.65e-08 | 9 |
gonad | 8.87e-08 | 21 |
indifferent external genitalia | 8.87e-08 | 21 |
indifferent gonad | 8.87e-08 | 21 |
gonad primordium | 8.87e-08 | 21 |
body cavity precursor | 9.56e-08 | 54 |
external genitalia | 1.89e-07 | 22 |
reproductive structure | 4.19e-07 | 59 |
reproductive system | 4.19e-07 | 59 |
urogenital ridge | 5.98e-07 | 11 |
anatomical cavity | 7.48e-07 | 61 |
male genital duct | 8.62e-07 | 3 |
internal male genitalia | 8.62e-07 | 3 |