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FFCP PHASE1:Mm9::chr7:146101175..146101196,-: Difference between revisions

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{{FFCP|EntrezGene=12176|HGNC=|MCL_coexpression_id=456|UniProt=O55003|association_with_transcript=0bp_to_ENSMUST00000106112,ENSMUST00000130500,NM_009760,uc009kfg.1_5end|description=CAGE_peak_1_at_Bnip3_5end|id=chr7:146101175..146101196,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.30e-16!122;UBERON:0000025!7.57e-15!114;UBERON:0001049!2.43e-08!52;UBERON:0005068!2.43e-08!52;UBERON:0006241!2.43e-08!52;UBERON:0007135!2.43e-08!52;UBERON:0003914!2.61e-08!47;UBERON:0002346!2.83e-08!71;UBERON:0003075!2.83e-08!71;UBERON:0007284!2.83e-08!71;UBERON:0000033!5.85e-08!63;UBERON:0000955!7.50e-08!50;UBERON:0006238!7.50e-08!50;UBERON:0002021!7.85e-08!10;UBERON:0000411!7.85e-08!10;UBERON:0001950!7.85e-08!10;UBERON:0002616!1.54e-07!49;UBERON:0003103!1.80e-07!43;UBERON:0007100!8.16e-07!18;UBERON:0000948!8.16e-07!18;UBERON:0005498!8.16e-07!18;UBERON:0004140!8.16e-07!18;UBERON:0009881!8.16e-07!18;UBERON:0004141!8.16e-07!18;UBERON:0003084!8.16e-07!18;UBERON:0007005!8.16e-07!18;UBERON:0004139!8.16e-07!18;UBERON:0004291!8.16e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.30e-16,122;UBERON:0010314,6.95e-15,92;UBERON:0000025,7.57e-15,114;UBERON:0000073,4.02e-09,54;UBERON:0001049,2.43e-08,52;UBERON:0005068,2.43e-08,52;UBERON:0006241,2.43e-08,52;UBERON:0007135,2.43e-08,52;UBERON:0003914,2.61e-08,47;UBERON:0002021,7.85e-08,10;UBERON:0000411,7.85e-08,10;UBERON:0001950,7.85e-08,10;UBERON:0002346,1.66e-07,64;UBERON:0003075,1.66e-07,64;UBERON:0007284,1.66e-07,64;UBERON:0003103,1.80e-07,43;UBERON:0007100,8.16e-07,18;UBERON:0000948,8.16e-07,18;UBERON:0005498,8.16e-07,18;UBERON:0004140,8.16e-07,18;UBERON:0009881,8.16e-07,18;UBERON:0004141,8.16e-07,18;UBERON:0003084,8.16e-07,18;UBERON:0007005,8.16e-07,18;UBERON:0004139,8.16e-07,18;UBERON:0004291,8.16e-07,18|phase1_expression=40.9981048588273,13.6100408979351,12.739978702907,8.16653370528441,9.01612313903425,6.21153306073992,4.67225281191051,4.64843964389675,1.54867594366833,1.87251621057595,2.39705155515707,1.83475965689274,5.30722262786738,3.4968160967599,2.99798785634096,2.02475267389826,2.79824751251259,6.30924330716475,9.32378148519024,8.91218268775863,40.3105195316071,31.0780677258771,24.8139799681989,13.2793710918528,14.2233754261645,21.8208146363708,9.90752591165872,7.32602191132023,17.1021077510736,11.3413558391969,5.76499327703792,18.4158895303293,9.22597181376855,15.8481681015439,1.44425809875637,1.49611180822643,1.63335485009895,30.9713406745312,25.0027310247616,24.6056159667685,35.8821207698919,34.1522742479223,44.6669524788661,24.2980858692864,25.1414789424396,24.9623582939887,14.8654355426127,11.5553332881637,18.0142669842267,18.2764105129826,16.2384249085421,15.8127820801469,8.72469551500229,2.90144856804538,2.68875039313971,34.9872833008888,31.5186783932632,31.455997628924,16.9945827122062,26.4495489636016,18.3811107016792,12.5372476865579,20.4537803105562,13.9484456178617,8.89979726310277,16.3410426437603,15.8788058574755,9.60545763303886,21.1526809109294,20.3858966880853,16.6156719467592,56.8445458963569,58.0884262702744,11.0241719293459,8.4344014496048,14.7075005857603,73.7776402695904,68.3127258755754,84.3299867576777,19.3872842963385,15.3699241252048,22.9201883044974,85.7091806934239,87.2282045549104,72.2735711984312,43.6050306501028,42.1420175165345,36.5342913817589,14.4637029266382,16.550171663386,21.1601076752225,36.1378028332182,82.2765313786378,34.0013010731825,53.2816662307089,87.8132698710778,36.796438074519,29.3140154834259,29.8753905293299,26.8538076627859,37.464349660597,10.2661181931454,7.64415719119937,14.2213340630666,18.4017384859532,18.2419103142071,18.1988800205322,50.5834587155436,12.1700805314171,38.2980718787248,15.26670875542,28.9242204396534,31.8249386213361,41.5994487925238,35.9821443835257,45.9939724266612,112.226515351406,93.1219858564231,22.1152637987469,35.1034064385878,26.0592991783264,21.819386391085,11.1835056730873,55.628351432194,67.0229461803056,13.0283098156382,12.9400334466394,12.5979573508616,9.91147771169905,98.1128688101589,73.6575970537989,15.0785222535437,111.595213563441,109.190500280051,81.0373373782284,89.2326946872667,21.2844270447161,22.8908825922571,39.1720275572196,28.409650544674,11.5807194236806,20.0014830857121,19.9868964083938,29.9902587493073,19.4584387572798,29.7223831060852,33.5452173923829,43.2034629134156,14.8741915123661,18.7215019366141,26.5686197487563,21.7003775103299,22.5218271872734,33.432207986128,49.3877127379064,17.1169469463904,8.42655824775882,7.72043721344146,13.3556844715929,36.6612617387838,43.1527950365217,53.2983701924604,51.1368628864054,55.6842775845153,44.8917298502271,50.4598660108385,57.1422344981189,57.5653137870146,37.5196457802735,39.2360239149038,50.9112123947974,52.339595498269,46.5446244417027,68.4452735677896,85.7982990141639,26.034866931959,14.2080076683033,18.5115396664481,16.8497717922835,24.6170872172065,23.453877960621,25.8154911517878,33.579084620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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12176
|HGNC=
|MCL_coexpression_id=456
|TSSclassifier=NA
|UniProt=uniprot:O55003
|association_with_transcript=0bp_to_ENSMUST00000106112,ENSMUST00000130500,NM_009760,uc009kfg.1_5end
|cluster_id=chr7:146101175..146101196,-
|description=CAGE_peak_1_at_Bnip3_5end
|id=chr7:146101175..146101196,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.30e-16,122;UBERON:0010314,6.95e-15,92;UBERON:0000025,7.57e-15,114;UBERON:0000073,4.02e-09,54;UBERON:0001049,2.43e-08,52;UBERON:0005068,2.43e-08,52;UBERON:0006241,2.43e-08,52;UBERON:0007135,2.43e-08,52;UBERON:0003914,2.61e-08,47;UBERON:0002021,7.85e-08,10;UBERON:0000411,7.85e-08,10;UBERON:0001950,7.85e-08,10;UBERON:0002346,1.66e-07,64;UBERON:0003075,1.66e-07,64;UBERON:0007284,1.66e-07,64;UBERON:0003103,1.80e-07,43;UBERON:0007100,8.16e-07,18;UBERON:0000948,8.16e-07,18;UBERON:0005498,8.16e-07,18;UBERON:0004140,8.16e-07,18;UBERON:0009881,8.16e-07,18;UBERON:0004141,8.16e-07,18;UBERON:0003084,8.16e-07,18;UBERON:0007005,8.16e-07,18;UBERON:0004139,8.16e-07,18;UBERON:0004291,8.16e-07,18
|phase1_expression=40.9981048588273,13.6100408979351,12.739978702907,8.16653370528441,9.01612313903425,6.21153306073992,4.67225281191051,4.64843964389675,1.54867594366833,1.87251621057595,2.39705155515707,1.83475965689274,5.30722262786738,3.4968160967599,2.99798785634096,2.02475267389826,2.79824751251259,6.30924330716475,9.32378148519024,8.91218268775863,40.3105195316071,31.0780677258771,24.8139799681989,13.2793710918528,14.2233754261645,21.8208146363708,9.90752591165872,7.32602191132023,17.1021077510736,11.3413558391969,5.76499327703792,18.4158895303293,9.22597181376855,15.8481681015439,1.44425809875637,1.49611180822643,1.63335485009895,30.9713406745312,25.0027310247616,24.6056159667685,35.8821207698919,34.1522742479223,44.6669524788661,24.2980858692864,25.1414789424396,24.9623582939887,14.8654355426127,11.5553332881637,18.0142669842267,18.2764105129826,16.2384249085421,15.8127820801469,8.72469551500229,2.90144856804538,2.68875039313971,34.9872833008888,31.5186783932632,31.455997628924,16.9945827122062,26.4495489636016,18.3811107016792,12.5372476865579,20.4537803105562,13.9484456178617,8.89979726310277,16.3410426437603,15.8788058574755,9.60545763303886,21.1526809109294,20.3858966880853,16.6156719467592,56.8445458963569,58.0884262702744,11.0241719293459,8.4344014496048,14.7075005857603,73.7776402695904,68.3127258755754,84.3299867576777,19.3872842963385,15.3699241252048,22.9201883044974,85.7091806934239,87.2282045549104,72.2735711984312,43.6050306501028,42.1420175165345,36.5342913817589,14.4637029266382,16.550171663386,21.1601076752225,36.1378028332182,82.2765313786378,34.0013010731825,53.2816662307089,87.8132698710778,36.796438074519,29.3140154834259,29.8753905293299,26.8538076627859,37.464349660597,10.2661181931454,7.64415719119937,14.2213340630666,18.4017384859532,18.2419103142071,18.1988800205322,50.5834587155436,12.1700805314171,38.2980718787248,15.26670875542,28.9242204396534,31.8249386213361,41.5994487925238,35.9821443835257,45.9939724266612,112.226515351406,93.1219858564231,22.1152637987469,35.1034064385878,26.0592991783264,21.819386391085,11.1835056730873,55.628351432194,67.0229461803056,13.0283098156382,12.9400334466394,12.5979573508616,9.91147771169905,98.1128688101589,73.6575970537989,15.0785222535437,111.595213563441,109.190500280051,81.0373373782284,89.2326946872667,21.2844270447161,22.8908825922571,39.1720275572196,28.409650544674,11.5807194236806,20.0014830857121,19.9868964083938,29.9902587493073,19.4584387572798,29.7223831060852,33.5452173923829,43.2034629134156,14.8741915123661,18.7215019366141,26.5686197487563,21.7003775103299,22.5218271872734,33.432207986128,49.3877127379064,17.1169469463904,8.42655824775882,7.72043721344146,13.3556844715929,36.6612617387838,43.1527950365217,53.2983701924604,51.1368628864054,55.6842775845153,44.8917298502271,50.4598660108385,57.1422344981189,57.5653137870146,37.5196457802735,39.2360239149038,50.9112123947974,52.339595498269,46.5446244417027,68.4452735677896,85.7982990141639,26.034866931959,14.2080076683033,18.5115396664481,16.8497717922835,24.6170872172065,23.453877960621,25.8154911517878,33.5790846205754,40.13760710975,19.455691523325,34.5867804920423,25.8875265064278,24.6706025331027,19.1064805376738,10.7858329038507,9.29393614461185,10.1562049359727,25.605166628666,17.4800224292885,16.9061603509621,21.7906920794486,28.8989205879762,27.4231055771146,38.5110511086727,55.3538054923508,51.8095801876537,61.3283904691349,62.8479569424756,16.5176654658933,14.9384836286034,15.7403478669398,22.7203335955123,33.0412708860811,61.6194561311036,75.3763880121124,48.1541623521855,28.8289483847486,20.1275489138296,36.0976719238448,33.388031023258,32.3300963772303,40.5438154559522,40.0428122731595,30.6690295676564,21.0335467065238,17.9261474086228,19.6904299499218,16.6630076284836,28.3085575076669,31.6598042378398,28.8797798829542,17.1822307075748,18.3815692408483,15.3076577911188,28.5122167605384,21.0675677876393,36.1622646453779,12.0633027151418,23.9318500880232,20.1623351937805,28.6974216156922,106.284490571918,102.443014081586,28.8525503862949,91.8994175023918,26.1871822115493,22.2550084249084,32.5289330576526,12.9043150894378,24.0622568008986,26.0430408325726,11.334699646897,25.4262596382841,22.5314033429518,45.3063056154748,32.5042795126935,28.6685621904281,18.5691133663077,19.4664745107592,11.9470624505967,11.8962511715941,13.9068836203785,22.255399411196,16.832207894204,32.5881256820563,21.1911200397941,13.4507479906677,20.3203505679291,25.2829406348653,26.3546521437497,27.8465966770104,54.1298973148523,18.3662315911936,18.4982917809339,29.5785108343597,31.3892213546824,30.322698992352,40.4790590681218,45.0608124689607,38.7208318305122,64.820613684329,35.0640152907389,26.7115729765198,29.063596805263,16.5257414303147,12.7728408083356,9.02774948597837,18.9462543809403,115.334537850537,4.61351378154202,15.2726282292785,14.4451731348375,3.76736914009382,2.87057878214153,4.80434163733698,13.9382312594961,13.2953879707475,12.9907975376158,25.7761066864081,21.0363435731455,18.7053909756701,23.0051375950437,23.626977449635,30.1340337969725,24.4104466956525,30.747085529825,31.6724689800676,19.9607058869361,29.2029477150855,21.4203316699992,9.56905894681464,14.3948886697675,16.139448632556,19.8906128155706,27.8777607059784,22.7673042972763,28.2543515111372,35.8618957935931,21.0178185118625,26.2107305694658,7.90027801570446,16.6234676537935,12.4280258169441,9.74406172333463,11.0996551313838,13.1129694155635,6.37035882455835,8.12292399460175,7.97634954590366,6.55378537232999,6.45287584875779,7.50425681696094,6.63861707318273,9.11639837016238,51.9212578478834,37.9595980269651,19.0193376012088,28.5403847818933,34.7741269257943,46.7329363873443,19.2309205480628,32.3696252409389,20.0628841614145,88.1012874482624,104.493828687129,111.141729607243,129.57729948714,108.243038123761,107.265933429337,107.328577536857,95.918416286759,87.4564849339515,101.998781415109,27.7112218049752,15.5619700626402,22.1953687480374,20.4209642337367,33.3284928578492,43.5709115026533,35.5594764482584,33.171644215462,32.0919209591815,37.9045817645696,34.9801433848531,34.8958731564241,35.1155653012059,30.1558467826934,33.3700074632113,28.5776214769844,30.8252307013316,27.5860185263098,32.1427002626579,30.764574308089,27.4295401908332,33.1879757517961,31.7120132629937,30.958786742686,32.1854081020431,29.6997273699785,33.4758190357174,34.9882716212331,36.9387189660744,29.7405403978601,34.8786953285072,35.658622619954,30.283097194557,32.071926125495,39.9316684730963,21.7335202806013,45.1488004299638,33.5198844315345,65.8031862316821,40.5888211179909,59.8219015900687
|short_description=p1@Bnip3
}}

Revision as of 10:53, 4 August 2015

Short description:p1@Bnip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bnip3_5end
Coexpression cluster:MCL_coexpression_mm9:456
Association with transcript: 0bp_to_ENSMUST00000106112, ENSMUST00000130500, NM_009760, uc009kfg.1_5end
EntrezGene:12176
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Bnip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.32
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H921.82
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G935.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H444.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.56
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C134.99
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C531.46
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C815.88
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D558.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D373.78
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F368.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D784.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E485.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E587.23
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I672.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F642.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.53
Mouse Schwann, donor1.CNhs12507.11728-123D914.46
Mouse Schwann, donor2.CNhs12573.11746-123F916.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C482.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F453.28
Mouse hepatocyte, donor8.CNhs13091.11824-124F687.81
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A736.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I729.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E329.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G637.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B650.58
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D738.30
adrenal gland, embryo E14.CNhs11038.406-44C515.27
adrenal gland, embryo E16.CNhs11004.1254-43D628.92
adrenal gland, embryo E17.CNhs11043.1263-45I131.82
adrenal gland, embryo E18.CNhs11026.1262-18F541.60
adrenal gland, neonate N00.CNhs11191.1311-23C135.98
adrenal gland, neonate N25.CNhs11223.1377-27I345.99
amnion, adult pregnant day17.5.CNhs10488.583-22A8112.23
aorta, adult.CNhs10498.46-23H193.12
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F535.10
bone (os femoris), neonate N16.CNhs11225.1525-43A626.06
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B255.63
cerebellum, neonate N30.CNhs11135.1395-42I267.02
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.91
corpora quadrigemina, adult.CNhs10501.16-22A498.11
corpus striatum, adult.CNhs10487.19-21D873.66
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D5111.60
cortex, neonate N30.CNhs11107.1392-42F2109.19
diencephalon, adult.CNhs10482.20-12F281.04
diencephalon, neonate N30.CNhs11201.1388-42B289.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.89
epididymis, adult.CNhs10490.58-23B239.17
eyeball, adult.CNhs10484.31-12G428.41
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E220.00
eyeball, embryo E15.CNhs10593.426-16C919.99
eyeball, embryo E17.CNhs11023.1261-18D429.99
eyeball, neonate N00.CNhs11207.633-15C619.46
eyeball, neonate N01.CNhs11140.1532-43E729.72
eyeball, neonate N02.CNhs11205.1551-44G833.55
eyeball, neonate N16.CNhs11188.777-19A243.20
forelimb, embryo E11.CNhs10596.335-25E214.87
forelimb, embryo E12.CNhs10600.359-14H218.72
forelimb, embryo E13.CNhs10589.384-1E226.57
forelimb, embryo E14.CNhs10577.413-26A821.70
forelimb, embryo E15.CNhs11007.437-20E722.52
forelimb, embryo E17.CNhs10598.1517-43C433.43
forelimb, embryo E18.CNhs11008.1520-43B549.39
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.36
heart, embryo E11.CNhs10586.331-24E936.66
heart, embryo E12.CNhs11015.353-12F543.15
heart, embryo E13.CNhs11013.376-3I953.30
heart, embryo E14.CNhs10597.403-26D451.14
heart, embryo E15.CNhs11017.431-16C855.68
heart, embryo E16.CNhs11021.457-17C644.89
heart, embryo E17.CNhs11025.479-18E550.46
heart, embryo E18.CNhs11030.1283-20G357.14
heart, neonate N00.CNhs11213.639-21E357.57
heart, neonate N03.CNhs11221.1349-25I237.52
heart, neonate N10.CNhs11118.749-24G139.24
heart, neonate N16.CNhs11209.782-15G150.91
heart, neonate N20.CNhs11127.821-26I652.34
heart, neonate N25.CNhs11196.1351-25D346.54
heart, neonate N30.CNhs11202.1390-42D268.45
hippocampus, adult.CNhs10478.13-16E885.80
hippocampus, neonate N00.CNhs11228.627-43G126.03
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A318.51
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D524.62
intestine, embryo E15.CNhs10602.976-16D823.45
intestine, embryo E16.CNhs10585.463-22H425.82
intestine, embryo E17.CNhs10582.482-18D333.58
intestine, embryo E18.CNhs10526.1289-20F740.14
intestine, neonate N00.CNhs11126.644-26D119.46
intestine, neonate N01.CNhs11192.1322-23E934.59
intestine, neonate N06.CNhs11102.688-20B825.89
intestine, neonate N07.CNhs11095.720-20F224.67
intestine, neonate N10.CNhs11098.755-23A519.11
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G110.16
kidney, embryo E14.CNhs10606.411-4I925.61
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I221.79
kidney, embryo E18.CNhs11001.1288-20C728.90
kidney, neonate N00.CNhs11214.646-21G727.42
kidney, neonate N10.CNhs11206.758-6D538.51
kidney, neonate N20.CNhs11113.832-19I155.35
kidney, neonate N25.CNhs11122.1353-25F351.81
kidney, neonate N30.CNhs11203.1385-42H161.33
liver, adult pregnant day01.CNhs10466.508-5B262.85
liver, embryo E12.CNhs10601.355-15F816.52
liver, embryo E13.CNhs10524.378-3H614.94
liver, embryo E14.CNhs10594.409-16E115.74
liver, embryo E15.CNhs10520.433-16D722.72
liver, embryo E16.CNhs10523.462-17F533.04
liver, embryo E17.CNhs10510.481-18A361.62
liver, embryo E18.CNhs10579.499-43G475.38
liver, neonate N00.CNhs11117.641-24F448.15
liver, neonate N03.CNhs11123.1345-25G228.83
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H236.10
liver, neonate N10.CNhs11115.751-24B933.39
liver, neonate N20.CNhs11220.823-25A332.33
liver, neonate N25.CNhs11198.1368-26H140.54
liver, neonate N30.CNhs11106.1382-42D140.04
lung, adult.CNhs10474.28-22B130.67
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A628.31
lung, embryo E18.CNhs10583.1287-20I631.66
lung, neonate N00.CNhs11224.640-42C628.88
lung, neonate N06.CNhs11212.683-20E517.18
lung, neonate N07.CNhs11111.715-19A318.38
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A428.51
lung, neonate N25.CNhs11119.1359-25C721.07
lung, neonate N30.CNhs11133.1394-42H236.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H228.70
medulla oblongata, adult.CNhs10477.17-12C2106.28
medulla oblongata, neonate N30.CNhs11200.1396-42A3102.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C291.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I945.31
ovary, adult.CNhs10507.91-2I732.50
ovary, embryo E18.CNhs11040.505-44H728.67
ovary, neonate N00.CNhs11217.1299-22I418.57
oviduct, adult pregnant day01.CNhs10500.988-6G619.47
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E522.26
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I732.59
pancreas, neonate N00.CNhs11105.645-26G921.19
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D820.32
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G854.13
pituitary gland, embryo E12.CNhs11018.346-16E618.37
pituitary gland, embryo E13.CNhs11009.370-44C718.50
pituitary gland, embryo E14.CNhs11037.398-44A529.58
pituitary gland, embryo E15.CNhs10592.427-16B931.39
pituitary gland, embryo E16.CNhs11036.449-43F630.32
pituitary gland, embryo E17.CNhs11039.1265-44F540.48
pituitary gland, neonate N00.CNhs11190.1308-22E945.06
placenta, adult pregnant day10.CNhs10472.539-13I738.72
placenta, adult pregnant day17.CNhs10464.577-18G364.82
prostate, adult.CNhs10470.859-1F835.06
skin, adult.CNhs10492.30-1C326.71
skin, neonate N00.CNhs11124.650-25G429.06
skin, neonate N03.CNhs11215.662-22H316.53
skin, neonate N06.CNhs11097.693-20I512.77
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C9115.33
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C115.27
spleen, embryo E18.CNhs11011.1271-21F214.45
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E321.04
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D423.01
stomach, embryo E17.CNhs11006.1035-18D523.63
stomach, embryo E18.CNhs10999.1286-20C630.13
stomach, neonate N03.CNhs11193.1340-24B824.41
stomach, neonate N07.CNhs11210.718-18A930.75
stomach, neonate N25.CNhs11104.1355-25E431.67
stomach, neonate N30.CNhs11134.1386-42I119.96
submandibular gland, adult.CNhs10469.59-29C129.20
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F59.57
testis, embryo E15.CNhs11034.443-27C514.39
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I519.89
testis, embryo E18.CNhs11027.503-18G527.88
testis, neonate N00.CNhs11189.1300-22B722.77
testis, neonate N07.CNhs11222.726-26I428.25
testis, neonate N10.CNhs11204.763-44D935.86
testis, neonate N20.CNhs11110.839-18H321.02
testis, neonate N30.CNhs11130.1391-42E226.21
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I416.62
thymus, embryo E15.CNhs11005.430-45I212.43
thymus, embryo E16.CNhs11002.456-26C59.74
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C47.98
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G76.64
thymus, neonate N30.CNhs11132.1393-42G29.12
tongue, adult.CNhs10499.32-1B451.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H337.96
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.54
urinary bladder, adult.CNhs10481.879-12E434.77
uterus, adult pregnant day19.CNhs10497.590-15F546.73
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D532.37
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2104.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3111.14
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7129.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4108.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5107.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6107.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A887.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9102.00
whole body, embryo E11.CNhs11014.324-5I827.71
whole body, embryo E12.CNhs10587.857-27C915.56
whole body, embryo E13.CNhs10512.372-23H222.20
whole body, embryo E14.5.CNhs10578.420-27D220.42
whole body, embryo E14.CNhs10519.395-14B133.33
whole body, embryo E16.CNhs10514.453-14F243.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G535.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G533.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G532.09
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.71
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G534.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G530.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.07
whole body, embryo E17.5.CNhs10513.490-9F939.93
whole body, embryo E17.CNhs10517.475-3I521.73
whole body, embryo E18.CNhs10516.493-3B345.15
whole body, neonate N00.CNhs10525.657-19C233.52
whole body, neonate N01.CNhs10576.659-23C665.80
whole body, neonate N06.CNhs10515.692-21D140.59
whole body, neonate N10.CNhs10518.761-6B459.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit2.30e-16122
structure with developmental contribution from neural crest6.95e-1592
tube7.57e-15114
regional part of nervous system4.02e-0954
neural tube2.43e-0852
neural rod2.43e-0852
future spinal cord2.43e-0852
neural keel2.43e-0852
epithelial tube2.61e-0847
occipital lobe7.85e-0810
visual cortex7.85e-0810
neocortex7.85e-0810
neurectoderm1.66e-0764
neural plate1.66e-0764
presumptive neural plate1.66e-0764
compound organ1.80e-0743
primary circulatory organ8.16e-0718
heart8.16e-0718
primitive heart tube8.16e-0718
primary heart field8.16e-0718
anterior lateral plate mesoderm8.16e-0718
heart tube8.16e-0718
heart primordium8.16e-0718
cardiac mesoderm8.16e-0718
cardiogenic plate8.16e-0718
heart rudiment8.16e-0718
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