FFCP PHASE1:Mm9::chr7:29619144..29619165,+: Difference between revisions
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{{FFCP|EntrezGene=16855|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000125155_5end|description=CAGE_peak_1_at_Lgals4_5end|id=chr7:29619144..29619165,+|ontology_enrichment_celltype=CL:0002563!8.93e-08!9;CL:0002251!8.93e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-09,9;CL:0002251,3.01e-09,9;CL:0000239,4.57e-07,6;CL:0000677,4.57e-07,6;CL:0000584,4.57e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.28e-21!59;UBERON:0000160!1.70e-17!43;UBERON:0001007!3.19e-14!128;UBERON:0001555!3.19e-14!128;UBERON:0007026!3.19e-14!128;UBERON:0004119!4.42e-14!130;UBERON:0000925!4.42e-14!130;UBERON:0006595!4.42e-14!130;UBERON:0004921!4.77e-13!126;UBERON:0004185!4.77e-13!126;UBERON:0000344!1.48e-12!15;UBERON:0001242!5.46e-11!13;UBERON:0000060!5.46e-11!13;UBERON:0001262!5.46e-11!13;UBERON:0004786!5.46e-11!13;UBERON:0004923!2.48e-09!24;UBERON:0003350!8.93e-08!9;UBERON:0004808!8.93e-08!9;UBERON:0001277!8.93e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.38e-29,47;UBERON:0000160,1.19e-27,31;UBERON:0000344,3.73e-15,15;UBERON:0001242,3.24e-13,13;UBERON:0001262,3.24e-13,13;UBERON:0004786,3.24e-13,13;UBERON:0001007,1.79e-12,116;UBERON:0001555,1.79e-12,116;UBERON:0007026,1.79e-12,116;UBERON:0004119,6.15e-12,118;UBERON:0000925,6.15e-12,118;UBERON:0006595,6.15e-12,118;UBERON:0004921,3.13e-11,114;UBERON:0003350,3.01e-09,9;UBERON:0004808,3.01e-09,9;UBERON:0001277,3.01e-09,9;UBERON:0004923,6.40e-09,24;UBERON:0000485,5.30e-07,11|phase1_expression=0,5655.14648079585,5556.9057106644,4368.18813969324,4377.82867973107,3541.2453617094,4355.94129654417,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,4863.28967565118,4503.07477806748,6397.51831220544,6000.51460649591,5682.62281962495,7800.27134526469,5681.26318504836,6152.35647915274,0,0,31.6963362030877,1751.88507379148,1742.80402193843,1556.17883343178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,225.834627571857,0,0,0,0,0,0,0,0.432982082022428,0,0,691.269207819189,0.258937883647172,0,0,0.913396434936424,2.7673859670727,0,0,3.14166478324189,2.47194967734374,0,0,1.13236794963186,0,0,4005.55894857744,0,0.209446706813455,4485.57043240766,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.536546802799238,0,0,0.32833492815819,0.405344047729279,0.292399974850665,0,0,0,0,4016.24030716806,4503.59315028016,8.53153002140936,35.996684138368,707.095760274326,1875.85846252171,2665.42323352462,3075.75814861397,2888.93292668299,3810.14561858527,2373.35837670094,2314.65959572675,2023.92218838359,2864.537455381,3345.38473596052,3667.78397079894,0,1.5994791765362,1.1270773567308,1.22190796707189,0.193952487167626,0.350679099451593,0,0,0,0,3.26097889795864,0.667380422864376,1.96558995113203,0.224862112384854,1.82574109249653,1.68824011826692,14.7682994033223,1.15078454980324,0,0.274561413188081,0,2.23284568601102,2.49630138491648,4.2938409251009,2.15276896226295,0,0,0,1.95557971730431,10.5241953180617,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.99358059645788,1.06839362200353,0.325773918707152,0,0,0,58.6507700511617,0,0.590603785761546,0.614870295887855,495.40703800348,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0.484393280087717,0.120625849856312,0.716234064018819,20.1893306686425,3166.35632831007,0,0,1.23832120777933,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,642.493325924171,3.63786392618306,87.4273708645449,400.483803767239,317.186945053949,518.17436376968,390.567147130441,326.233189747901,254.950287492445,3996.80731642572,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.129920822977795,0,0.39736270956253,1.32214994471966,1.77227432609493,0.706765149637033,0.914481679859998,1.51239277705261,3.11865218367208,1.92423683280659,2.10378423926824,0,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,34.0349403895612,28.2977769547776,107.180765426358,159.128657105957,144.842645238943,156.287655071214,137.71998041127,158.93152103118,131.661186287481,128.195223726269,112.108041860926,113.951970407937,110.02384268639,94.9092629488366,94.7184272476792,102.609389300023,122.17510371155,162.177156378301,140.915790090514,118.741222593766,148.107998548343,135.611617178491,129.883423113723,144.330170596618,127.851879758792,116.927342021287,173.954104213899,113.177807290462,102.838679600088,116.630847303361,114.963136159987,133.49137479895,0.499621155875892,183.636312629646,179.202459076281,19.7026982030909,12.7943023089319,11.1296561097802|short_description=p1@Lgals4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16855 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000125155_5end | |||
|cluster_id=chr7:29619144..29619165,+ | |||
|description=CAGE_peak_1_at_Lgals4_5end | |||
|id=chr7:29619144..29619165,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.93e-08!9;CL:0002251!8.93e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-09,9;CL:0002251,3.01e-09,9;CL:0000239,4.57e-07,6;CL:0000677,4.57e-07,6;CL:0000584,4.57e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.28e-21!59;UBERON:0000160!1.70e-17!43;UBERON:0001007!3.19e-14!128;UBERON:0001555!3.19e-14!128;UBERON:0007026!3.19e-14!128;UBERON:0004119!4.42e-14!130;UBERON:0000925!4.42e-14!130;UBERON:0006595!4.42e-14!130;UBERON:0004921!4.77e-13!126;UBERON:0004185!4.77e-13!126;UBERON:0000344!1.48e-12!15;UBERON:0001242!5.46e-11!13;UBERON:0000060!5.46e-11!13;UBERON:0001262!5.46e-11!13;UBERON:0004786!5.46e-11!13;UBERON:0004923!2.48e-09!24;UBERON:0003350!8.93e-08!9;UBERON:0004808!8.93e-08!9;UBERON:0001277!8.93e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.38e-29,47;UBERON:0000160,1.19e-27,31;UBERON:0000344,3.73e-15,15;UBERON:0001242,3.24e-13,13;UBERON:0001262,3.24e-13,13;UBERON:0004786,3.24e-13,13;UBERON:0001007,1.79e-12,116;UBERON:0001555,1.79e-12,116;UBERON:0007026,1.79e-12,116;UBERON:0004119,6.15e-12,118;UBERON:0000925,6.15e-12,118;UBERON:0006595,6.15e-12,118;UBERON:0004921,3.13e-11,114;UBERON:0003350,3.01e-09,9;UBERON:0004808,3.01e-09,9;UBERON:0001277,3.01e-09,9;UBERON:0004923,6.40e-09,24;UBERON:0000485,5.30e-07,11 | |||
|phase1_expression=0,5655.14648079585,5556.9057106644,4368.18813969324,4377.82867973107,3541.2453617094,4355.94129654417,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,4863.28967565118,4503.07477806748,6397.51831220544,6000.51460649591,5682.62281962495,7800.27134526469,5681.26318504836,6152.35647915274,0,0,31.6963362030877,1751.88507379148,1742.80402193843,1556.17883343178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,225.834627571857,0,0,0,0,0,0,0,0.432982082022428,0,0,691.269207819189,0.258937883647172,0,0,0.913396434936424,2.7673859670727,0,0,3.14166478324189,2.47194967734374,0,0,1.13236794963186,0,0,4005.55894857744,0,0.209446706813455,4485.57043240766,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.536546802799238,0,0,0.32833492815819,0.405344047729279,0.292399974850665,0,0,0,0,4016.24030716806,4503.59315028016,8.53153002140936,35.996684138368,707.095760274326,1875.85846252171,2665.42323352462,3075.75814861397,2888.93292668299,3810.14561858527,2373.35837670094,2314.65959572675,2023.92218838359,2864.537455381,3345.38473596052,3667.78397079894,0,1.5994791765362,1.1270773567308,1.22190796707189,0.193952487167626,0.350679099451593,0,0,0,0,3.26097889795864,0.667380422864376,1.96558995113203,0.224862112384854,1.82574109249653,1.68824011826692,14.7682994033223,1.15078454980324,0,0.274561413188081,0,2.23284568601102,2.49630138491648,4.2938409251009,2.15276896226295,0,0,0,1.95557971730431,10.5241953180617,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.99358059645788,1.06839362200353,0.325773918707152,0,0,0,58.6507700511617,0,0.590603785761546,0.614870295887855,495.40703800348,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0.484393280087717,0.120625849856312,0.716234064018819,20.1893306686425,3166.35632831007,0,0,1.23832120777933,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,642.493325924171,3.63786392618306,87.4273708645449,400.483803767239,317.186945053949,518.17436376968,390.567147130441,326.233189747901,254.950287492445,3996.80731642572,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.129920822977795,0,0.39736270956253,1.32214994471966,1.77227432609493,0.706765149637033,0.914481679859998,1.51239277705261,3.11865218367208,1.92423683280659,2.10378423926824,0,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.512200817262403,34.0349403895612,28.2977769547776,107.180765426358,159.128657105957,144.842645238943,156.287655071214,137.71998041127,158.93152103118,131.661186287481,128.195223726269,112.108041860926,113.951970407937,110.02384268639,94.9092629488366,94.7184272476792,102.609389300023,122.17510371155,162.177156378301,140.915790090514,118.741222593766,148.107998548343,135.611617178491,129.883423113723,144.330170596618,127.851879758792,116.927342021287,173.954104213899,113.177807290462,102.838679600088,116.630847303361,114.963136159987,133.49137479895,0.499621155875892,183.636312629646,179.202459076281,19.7026982030909,12.7943023089319,11.1296561097802 | |||
|short_description=p1@Lgals4 | |||
}} |
Revision as of 23:37, 4 August 2015
Short description: | p1@Lgals4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lgals4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -9bp_to_ENSMUST00000125155_5end |
EntrezGene: | 16855 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.01e-09 | 9 |
epithelial cell of alimentary canal | 3.01e-09 | 9 |
brush border epithelial cell | 4.57e-07 | 6 |
gut absorptive cell | 4.57e-07 | 6 |
enterocyte | 4.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.38e-29 | 47 |
intestine | 1.19e-27 | 31 |
mucosa | 3.73e-15 | 15 |
intestinal mucosa | 3.24e-13 | 13 |
wall of intestine | 3.24e-13 | 13 |
gastrointestinal system mucosa | 3.24e-13 | 13 |
digestive system | 1.79e-12 | 116 |
digestive tract | 1.79e-12 | 116 |
primitive gut | 1.79e-12 | 116 |
endoderm-derived structure | 6.15e-12 | 118 |
endoderm | 6.15e-12 | 118 |
presumptive endoderm | 6.15e-12 | 118 |
subdivision of digestive tract | 3.13e-11 | 114 |
epithelium of mucosa | 3.01e-09 | 9 |
gastrointestinal system epithelium | 3.01e-09 | 9 |
intestinal epithelium | 3.01e-09 | 9 |
organ component layer | 6.40e-09 | 24 |
simple columnar epithelium | 5.30e-07 | 11 |