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FFCP PHASE1:Mm9::chr7:30023453..30023475,+: Difference between revisions

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{{FFCP|EntrezGene=77254|HGNC=|MCL_coexpression_id=0|UniProt=D3YY42|association_with_transcript=0bp_to_ENSMUST00000108237_5end|description=CAGE_peak_4_at_Yif1b_5end|id=chr7:30023453..30023475,+|ontology_enrichment_celltype=CL:0000055!8.79e-08!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!6.23e-11!122;UBERON:0000025!1.73e-10!114;UBERON:0004535!4.15e-10!23;UBERON:0001009!4.15e-10!23;UBERON:0007100!3.63e-09!18;UBERON:0000948!3.63e-09!18;UBERON:0005498!3.63e-09!18;UBERON:0004140!3.63e-09!18;UBERON:0009881!3.63e-09!18;UBERON:0004141!3.63e-09!18;UBERON:0003084!3.63e-09!18;UBERON:0007005!3.63e-09!18;UBERON:0004139!3.63e-09!18;UBERON:0004291!3.63e-09!18;UBERON:0001017!5.04e-09!73;UBERON:0005743!5.04e-09!73;UBERON:0001049!1.39e-08!52;UBERON:0005068!1.39e-08!52;UBERON:0006241!1.39e-08!52;UBERON:0007135!1.39e-08!52;UBERON:0000073!2.55e-08!75;UBERON:0001016!2.55e-08!75;UBERON:0002020!6.09e-08!34;UBERON:0002616!2.80e-07!49;UBERON:0000955!5.39e-07!50;UBERON:0006238!5.39e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.40e-11,122;UBERON:0010314,3.02e-11,92;UBERON:0000025,6.95e-11,114;UBERON:0004535,1.87e-10,23;UBERON:0001009,1.87e-10,23;UBERON:0007100,1.79e-09,18;UBERON:0000948,1.79e-09,18;UBERON:0005498,1.79e-09,18;UBERON:0004140,1.79e-09,18;UBERON:0009881,1.79e-09,18;UBERON:0004141,1.79e-09,18;UBERON:0003084,1.79e-09,18;UBERON:0007005,1.79e-09,18;UBERON:0004139,1.79e-09,18;UBERON:0004291,1.79e-09,18;UBERON:0001017,3.26e-09,73;UBERON:0000073,6.96e-09,54;UBERON:0001049,7.12e-09,52;UBERON:0005068,7.12e-09,52;UBERON:0006241,7.12e-09,52;UBERON:0007135,7.12e-09,52;UBERON:0001016,2.60e-08,75;UBERON:0002020,5.41e-08,34;UBERON:0002616,2.89e-07,46;UBERON:0002346,6.41e-07,64;UBERON:0003075,6.41e-07,64;UBERON:0007284,6.41e-07,64;UBERON:0000955,9.15e-07,47;UBERON:0006238,9.15e-07,47|phase1_expression=1.44133962394315,0,0,0,0,0.839396359559449,0.700837921786577,1.93684985162364,0,0,0.856089841127525,1.35612670292072,0.856003649656029,0.611942816932982,0.333109761815663,1.01237633694913,0,0.788655413395594,2.4680598049033,1.27316895539409,9.09963204616447,1.29078236561151,1.30599894569468,0.159992422793407,1.14704640533585,0,0,0,0.570070258369122,0.504060259519861,1.10865255327652,1.27006134691926,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0.683045484958446,0,3.02152363141385,3.24406179902447,2.56965453026354,10.1710874765245,10.9012578190223,14.4992880604751,9.52706505463989,4.19959264876088,10.062679505548,0.335565212115473,0.725362142011344,0,7.71778308107841,3.72493471920384,5.15672092277442,1.82084814773638,1.05798195854407,1.26766280701236,5.76035704517525,4.4464739805557,9.44894703145469,5.93319817540185,3.5524005747305,5.69240209984969,4.99483796918021,1.97010263386108,1.08004750665353,1.68259969081106,5.42736870367227,4.41737081903227,1.71487118900936,1.43768206527355,1.83843757322004,1.10115880999389,3.70293280447044,1.84327839907492,2.50583946687368,2.19570344645783,2.6045668527838,4.18774498502071,2.25105044012672,2.29197371665215,3.83017161115768,2.27794689278565,1.3047961207771,0.908714319998209,0.68014404096107,1.73918693221007,2.58127163094416,0,1.07940638327563,0.649776417447669,0.896053774194671,3.5111105032938,4.09032774187339,5.45550609666024,5.3000936176551,1.40843419776681,3.84979432242953,2.54805239706646,14.2213340630666,2.59789249213457,2.53359865475099,1.51657333504435,1.7127581957859,0.258937883647172,0.148442139064825,0.867426633830679,1.21786191324856,0.230615497256059,0.60289056221049,0.352766121407114,1.63366568728578,1.23597483867187,1.87979163995885,0.884610551949874,1.7794353494215,1.10420759230197,0,0,2.63502717310392,2.72280718857492,0.255457055208591,1.07833612055328,2.39961092397363,1.39777249780371,1.04853447583376,1.37250180845588,1.7591609295801,3.30266208365325,2.04572365864264,1.87009240103604,2.10913641988085,1.32391173005411,1.61729061793121,3.0326731012041,1.68353484709179,1.17108398666433,0.689706313300419,0.720248519221397,1.65775299619287,0.816437989815934,1.15302348256365,1.21812241927647,0.776110112217047,1.94011193639558,1.70195472151037,2.11141348996739,2.19195732427575,1.39023624612799,4.87553033131033,1.4404749548556,0.398068533636986,2.1066395619397,0.772043721344145,1.70498099637356,2.27838349789052,2.34526059981096,3.06105504483725,2.3674473558521,2.55793501271625,2.62254091908543,4.41814495025775,7.24338183778972,3.03589890154641,5.10135534731789,3.77585167381919,3.72916523910936,5.99419948443863,5.04965265169416,6.30770168173747,2.94405927989778,1.54356918568927,0,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,1.4117846723634,1.11189021922435,1.33157938278791,0.949058123089023,0.823494773620054,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0.379335801906163,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.948548056863859,0.885660887877613,1.41298855057237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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:77254
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:D3YY42
|association_with_transcript=0bp_to_ENSMUST00000108237_5end
|cluster_id=chr7:30023453..30023475,+
|description=CAGE_peak_4_at_Yif1b_5end
|id=chr7:30023453..30023475,+
|ontology_enrichment_celltype=CL:0000055!8.79e-08!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!6.23e-11!122;UBERON:0000025!1.73e-10!114;UBERON:0004535!4.15e-10!23;UBERON:0001009!4.15e-10!23;UBERON:0007100!3.63e-09!18;UBERON:0000948!3.63e-09!18;UBERON:0005498!3.63e-09!18;UBERON:0004140!3.63e-09!18;UBERON:0009881!3.63e-09!18;UBERON:0004141!3.63e-09!18;UBERON:0003084!3.63e-09!18;UBERON:0007005!3.63e-09!18;UBERON:0004139!3.63e-09!18;UBERON:0004291!3.63e-09!18;UBERON:0001017!5.04e-09!73;UBERON:0005743!5.04e-09!73;UBERON:0001049!1.39e-08!52;UBERON:0005068!1.39e-08!52;UBERON:0006241!1.39e-08!52;UBERON:0007135!1.39e-08!52;UBERON:0000073!2.55e-08!75;UBERON:0001016!2.55e-08!75;UBERON:0002020!6.09e-08!34;UBERON:0002616!2.80e-07!49;UBERON:0000955!5.39e-07!50;UBERON:0006238!5.39e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.40e-11,122;UBERON:0010314,3.02e-11,92;UBERON:0000025,6.95e-11,114;UBERON:0004535,1.87e-10,23;UBERON:0001009,1.87e-10,23;UBERON:0007100,1.79e-09,18;UBERON:0000948,1.79e-09,18;UBERON:0005498,1.79e-09,18;UBERON:0004140,1.79e-09,18;UBERON:0009881,1.79e-09,18;UBERON:0004141,1.79e-09,18;UBERON:0003084,1.79e-09,18;UBERON:0007005,1.79e-09,18;UBERON:0004139,1.79e-09,18;UBERON:0004291,1.79e-09,18;UBERON:0001017,3.26e-09,73;UBERON:0000073,6.96e-09,54;UBERON:0001049,7.12e-09,52;UBERON:0005068,7.12e-09,52;UBERON:0006241,7.12e-09,52;UBERON:0007135,7.12e-09,52;UBERON:0001016,2.60e-08,75;UBERON:0002020,5.41e-08,34;UBERON:0002616,2.89e-07,46;UBERON:0002346,6.41e-07,64;UBERON:0003075,6.41e-07,64;UBERON:0007284,6.41e-07,64;UBERON:0000955,9.15e-07,47;UBERON:0006238,9.15e-07,47
|phase1_expression=1.44133962394315,0,0,0,0,0.839396359559449,0.700837921786577,1.93684985162364,0,0,0.856089841127525,1.35612670292072,0.856003649656029,0.611942816932982,0.333109761815663,1.01237633694913,0,0.788655413395594,2.4680598049033,1.27316895539409,9.09963204616447,1.29078236561151,1.30599894569468,0.159992422793407,1.14704640533585,0,0,0,0.570070258369122,0.504060259519861,1.10865255327652,1.27006134691926,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0.683045484958446,0,3.02152363141385,3.24406179902447,2.56965453026354,10.1710874765245,10.9012578190223,14.4992880604751,9.52706505463989,4.19959264876088,10.062679505548,0.335565212115473,0.725362142011344,0,7.71778308107841,3.72493471920384,5.15672092277442,1.82084814773638,1.05798195854407,1.26766280701236,5.76035704517525,4.4464739805557,9.44894703145469,5.93319817540185,3.5524005747305,5.69240209984969,4.99483796918021,1.97010263386108,1.08004750665353,1.68259969081106,5.42736870367227,4.41737081903227,1.71487118900936,1.43768206527355,1.83843757322004,1.10115880999389,3.70293280447044,1.84327839907492,2.50583946687368,2.19570344645783,2.6045668527838,4.18774498502071,2.25105044012672,2.29197371665215,3.83017161115768,2.27794689278565,1.3047961207771,0.908714319998209,0.68014404096107,1.73918693221007,2.58127163094416,0,1.07940638327563,0.649776417447669,0.896053774194671,3.5111105032938,4.09032774187339,5.45550609666024,5.3000936176551,1.40843419776681,3.84979432242953,2.54805239706646,14.2213340630666,2.59789249213457,2.53359865475099,1.51657333504435,1.7127581957859,0.258937883647172,0.148442139064825,0.867426633830679,1.21786191324856,0.230615497256059,0.60289056221049,0.352766121407114,1.63366568728578,1.23597483867187,1.87979163995885,0.884610551949874,1.7794353494215,1.10420759230197,0,0,2.63502717310392,2.72280718857492,0.255457055208591,1.07833612055328,2.39961092397363,1.39777249780371,1.04853447583376,1.37250180845588,1.7591609295801,3.30266208365325,2.04572365864264,1.87009240103604,2.10913641988085,1.32391173005411,1.61729061793121,3.0326731012041,1.68353484709179,1.17108398666433,0.689706313300419,0.720248519221397,1.65775299619287,0.816437989815934,1.15302348256365,1.21812241927647,0.776110112217047,1.94011193639558,1.70195472151037,2.11141348996739,2.19195732427575,1.39023624612799,4.87553033131033,1.4404749548556,0.398068533636986,2.1066395619397,0.772043721344145,1.70498099637356,2.27838349789052,2.34526059981096,3.06105504483725,2.3674473558521,2.55793501271625,2.62254091908543,4.41814495025775,7.24338183778972,3.03589890154641,5.10135534731789,3.77585167381919,3.72916523910936,5.99419948443863,5.04965265169416,6.30770168173747,2.94405927989778,1.54356918568927,0,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,1.4117846723634,1.11189021922435,1.33157938278791,0.949058123089023,0.823494773620054,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0.379335801906163,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.948548056863859,0.885660887877613,1.41298855057237,1.35736880313981,0.592905254174298,0.500535317148282,0.589676985339609,0,1.01430060694251,0.482354319504834,0.50925170356284,1.15078454980324,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.757736633841335,0.896987067609561,1.92977408545347,1.66277871149944,2.27389694124582,2.60743962307241,1.69745085775188,1.40814148973101,1.50755631697634,0.714130922658041,1.36593553500459,1.7339865851681,1.10732344824387,1.91345722388985,2.29408640602033,2.59027472798843,2.4590339958857,1.50791283939272,3.26343410291226,0.491764273019036,2.20749397043786,1.9266070798535,2.46144541843627,2.45902418065013,3.28212205365685,2.83957397474631,1.56175497718655,1.93881057959519,0.716906393857656,0.222798674082394,0.566153061577665,2.42886421004937,1.75353514746787,1.18586333383957,0.963963949265421,1.13552068166615,0.890328018336276,0.488660878060728,1.64970122972535,0,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,2.15204603560749,1.03371317267288,0.727067458955011,1.78248689192361,1.26414703174326,0,3.09406629744561,1.36175842301515,1.8006109403131,1.4229455216103,2.35770738534752,0.532020700926821,0.356737635204141,0.493647061806363,2.74018454203139,1.17335854031855,2.1183207086382,1.98475558249466,0.98931751764888,1.61464426695906,1.56813604813205,1.3130957840345,1.14898629821543,0,2.41052892613663,1.02522528478712,0.206386867963223,0.925972636848558,0.565105371014073,0.683471138605126,1.60144721244566,2.20971958992012,1.39951452323658,1.65839968565309,1.90934123603023,0.790839983952838,0.609958401380546,1.08005340821801,0.836353184057875,1.09181281873089,1.75323650300267,1.40510874733071,1.57053565190418,0.777689839750757,6.83473244395618,61.4425303165767,1.04661582230785,1.32366792365678,1.16670713006429,1.03327858782185,0.844780627453891,0.938857909166032,2.0832701575032,1.36317147753424,13.5287107662563,24.1945205256607,0.948033361884535,1.62180172232131,0.924398614483445,0.909445760844565,0.716106782669926,1.58945083825012,1.08175904567972,0.738447635872886,0.403865799792591,0.838274873204998,0.604957110821043,0.682205165178267,0.673482891482306,1.05189211963412,1.81384306892169,0.887943813496259,0.897138566094757,1.34307693091263,1.35232715822533,2.064507229963,0.915758121336325,1.50057865355346,1.00314420807073,3.3885110557024,3.68260189205742,2.86447756719698,2.40594455281163,2.05524755931193,4.5323633843382,4.05013500139084,2.2516060161211,0.906284817968409,3.62432218226274,0.62272408550506,1.19707462020309,1.36586884603307,1.70174701947806,0.838452650511929,1.47074806760011,3.33370091702423,1.23621034343337,0.962757628775446,1.51618327058278,1.01391719956096,2.64076877940507,1.77918864192777,1.60062881012173,1.78049953762401,1.90517476513229,1.62238056322798,1.73618298417335,1.64834360321323,2.79677948255355,1.71434626192708,0.887379030796687,1.43061713968393,2.0348498328526,1.69396884747595,1.01537529470012,1.64635175585495,1.8414879800649,2.17286582153379,3.36685362994643,3.08451047122853,2.06859412988683,1.63692417267876,1.23949472948773,2.50778594275484,3.2475375131933,2.8071793013449,1.28922632428979,2.10417165275728,2.42650561031467,2.78241402744506
|short_description=p4@Yif1b
}}

Revision as of 00:02, 5 August 2015

Short description:p4@Yif1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Yif1b_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000108237_5end
EntrezGene:77254
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Yif1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G561.44
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E224.19
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit2.40e-11122
structure with developmental contribution from neural crest3.02e-1192
tube6.95e-11114
cardiovascular system1.87e-1023
circulatory system1.87e-1023
primary circulatory organ1.79e-0918
heart1.79e-0918
primitive heart tube1.79e-0918
primary heart field1.79e-0918
anterior lateral plate mesoderm1.79e-0918
heart tube1.79e-0918
heart primordium1.79e-0918
cardiac mesoderm1.79e-0918
cardiogenic plate1.79e-0918
heart rudiment1.79e-0918
central nervous system3.26e-0973
regional part of nervous system6.96e-0954
neural tube7.12e-0952
neural rod7.12e-0952
future spinal cord7.12e-0952
neural keel7.12e-0952
nervous system2.60e-0875
gray matter5.41e-0834
regional part of brain2.89e-0746
neurectoderm6.41e-0764
neural plate6.41e-0764
presumptive neural plate6.41e-0764
brain9.15e-0747
future brain9.15e-0747
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