FFCP PHASE1:Mm9::chr7:5035524..5035548,+: Difference between revisions
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{{FFCP|EntrezGene=13854|HGNC=|MCL_coexpression_id=312|UniProt=|association_with_transcript=257bp_to_ENSMUST00000152083_5end|description=CAGE_peak_4_at_Epn1_5end|id=chr7:5035524..5035548,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.66e-11,6;CL:0000677,1.66e-11,6;CL:0000584,1.66e-11,6;CL:0000075,7.04e-10,7;CL:0002563,1.06e-07,9;CL:0002251,1.06e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.79e-09!43;UBERON:0000344!8.21e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.60e-50,31;UBERON:0005409,6.06e-32,47;UBERON:0001242,8.83e-19,13;UBERON:0001262,8.83e-19,13;UBERON:0004786,8.83e-19,13;UBERON:0000344,3.85e-16,15;UBERON:0002108,5.66e-16,4;UBERON:0000331,4.21e-12,3;UBERON:0002116,4.21e-12,3;UBERON:0001204,4.21e-12,3;UBERON:0001168,4.21e-12,3;UBERON:0004921,2.75e-11,114;UBERON:0001007,4.91e-11,116;UBERON:0001555,4.91e-11,116;UBERON:0007026,4.91e-11,116;UBERON:0004119,8.60e-11,118;UBERON:0000925,8.60e-11,118;UBERON:0006595,8.60e-11,118;UBERON:0004923,1.08e-09,24;UBERON:0003350,1.06e-07,9;UBERON:0004808,1.06e-07,9;UBERON:0001277,1.06e-07,9|phase1_expression=0,5.58360652222978,2.27499619694768,4.83942738090928,3.00537437967808,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.68822784320151,1.72269589234506,0,0.215471232685889,2.85035129184561,1.26015064879965,1.10865255327652,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0.768436610643109,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.548925861614458,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,1.53274233125155,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.102904612379284,1.32167513193519,2.3800550999719,0,0.232236671860439,0,0.80673409849337,1.77902435075896,3.80451252225118,3.32170343081158,5.43506550589236,6.03204501120647,6.16765063327568,4.28920991662064,2.69645822596266,0.864552199498777,1.99141273254367,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,1.29214146584111,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,3.49777003955821,0.18542530201051,0,0,0,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p4@Epn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13854 | |||
|HGNC= | |||
|MCL_coexpression_id=312 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=257bp_to_ENSMUST00000152083_5end | |||
|cluster_id=chr7:5035524..5035548,+ | |||
|description=CAGE_peak_4_at_Epn1_5end | |||
|id=chr7:5035524..5035548,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.66e-11,6;CL:0000677,1.66e-11,6;CL:0000584,1.66e-11,6;CL:0000075,7.04e-10,7;CL:0002563,1.06e-07,9;CL:0002251,1.06e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.79e-09!43;UBERON:0000344!8.21e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.60e-50,31;UBERON:0005409,6.06e-32,47;UBERON:0001242,8.83e-19,13;UBERON:0001262,8.83e-19,13;UBERON:0004786,8.83e-19,13;UBERON:0000344,3.85e-16,15;UBERON:0002108,5.66e-16,4;UBERON:0000331,4.21e-12,3;UBERON:0002116,4.21e-12,3;UBERON:0001204,4.21e-12,3;UBERON:0001168,4.21e-12,3;UBERON:0004921,2.75e-11,114;UBERON:0001007,4.91e-11,116;UBERON:0001555,4.91e-11,116;UBERON:0007026,4.91e-11,116;UBERON:0004119,8.60e-11,118;UBERON:0000925,8.60e-11,118;UBERON:0006595,8.60e-11,118;UBERON:0004923,1.08e-09,24;UBERON:0003350,1.06e-07,9;UBERON:0004808,1.06e-07,9;UBERON:0001277,1.06e-07,9 | |||
|phase1_expression=0,5.58360652222978,2.27499619694768,4.83942738090928,3.00537437967808,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.68822784320151,1.72269589234506,0,0.215471232685889,2.85035129184561,1.26015064879965,1.10865255327652,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.599200221036809,0.768436610643109,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.548925861614458,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,1.53274233125155,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.102904612379284,1.32167513193519,2.3800550999719,0,0.232236671860439,0,0.80673409849337,1.77902435075896,3.80451252225118,3.32170343081158,5.43506550589236,6.03204501120647,6.16765063327568,4.28920991662064,2.69645822596266,0.864552199498777,1.99141273254367,0,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,1.29214146584111,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,3.49777003955821,0.18542530201051,0,0,0,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p4@Epn1 | |||
}} |
Revision as of 05:17, 5 August 2015
Short description: | p4@Epn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Epn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | 257bp_to_ENSMUST00000152083_5end |
EntrezGene: | 13854 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.66e-11 | 6 |
gut absorptive cell | 1.66e-11 | 6 |
enterocyte | 1.66e-11 | 6 |
columnar/cuboidal epithelial cell | 7.04e-10 | 7 |
intestinal epithelial cell | 1.06e-07 | 9 |
epithelial cell of alimentary canal | 1.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.60e-50 | 31 |
gastrointestinal system | 6.06e-32 | 47 |
intestinal mucosa | 8.83e-19 | 13 |
wall of intestine | 8.83e-19 | 13 |
gastrointestinal system mucosa | 8.83e-19 | 13 |
mucosa | 3.85e-16 | 15 |
small intestine | 5.66e-16 | 4 |
ileal mucosa | 4.21e-12 | 3 |
ileum | 4.21e-12 | 3 |
mucosa of small intestine | 4.21e-12 | 3 |
wall of small intestine | 4.21e-12 | 3 |
subdivision of digestive tract | 2.75e-11 | 114 |
digestive system | 4.91e-11 | 116 |
digestive tract | 4.91e-11 | 116 |
primitive gut | 4.91e-11 | 116 |
endoderm-derived structure | 8.60e-11 | 118 |
endoderm | 8.60e-11 | 118 |
presumptive endoderm | 8.60e-11 | 118 |
organ component layer | 1.08e-09 | 24 |
epithelium of mucosa | 1.06e-07 | 9 |
gastrointestinal system epithelium | 1.06e-07 | 9 |
intestinal epithelium | 1.06e-07 | 9 |