Personal tools

FFCP PHASE1:Mm9::chr8:13288237..13288263,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=234076|HGNC=|UniProt=Q8BH01|association_with_transcript=224bp_to_ENSMUST00000045229,ENSMUST00000084058,NM_172282,uc009kxm.1,uc009kxn.1,uc009kxo.1_5end|description=CAGE_peak_3_at_Tmco3_5end|id=chr8:13288237..13288263,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-07,31|phase1_expression=3.52327463630547,4.53668029931169,4.54999239389536,4.23449895829562,5.50985302940982,6.88305014838748,8.41005506143892,0.387369970324729,0.281577444303333,0.234064526321993,0.34243593645101,0.478632953972018,0,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,2.63634199468316,0.595745707205312,1.82839852397255,6.55968933452967,6.8822784320151,7.46501553349526,6.46142994238612,6.03319451520489,14.4417798786844,7.81293402255785,9.09095093686749,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,7.95210098400125,4.6880120671428,4.18818995179039,7.64700934440319,4.09827290975067,11.1667381197165,3.14742044938943,4.35920804243913,3.67093504323363,3.9119567217402,2.39827672018491,6.15121311656521,3.11087838518853,3.91961980551015,2.87505128729943,0,0,0,3.08711323243136,1.71920063963254,3.09403255366465,2.02316460859598,0,1.26766280701236,3.38844532069132,0.889294796111139,2.2497492932035,0.988866362566974,4.9733608046227,5.09320187881288,5.37905627450176,0.622137673850866,0.405017814995072,1.05162480675691,3.71346279724945,2.87129103237098,0.734944795289724,1.0543001812006,1.83843757322004,3.30347642998166,2.55374676170375,2.30409799884365,1.97829431595291,1.55528994124096,0,2.23346399201105,1.68828783009504,2.44477196442896,1.47314292736834,2.27794689278565,1.86399445825301,1.66597625333005,3.09843396437821,2.89864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,2.10666630197628,1.1930122580464,2.59786004602869,2.47337702157238,2.95771181531029,3.84979432242953,12.7402619853323,0,1.29894624606728,1.52015919285059,1.01104889002957,2.2836775943812,0.776813650941515,2.07818994690755,2.08182392119363,1.52232739156071,0.922461989024234,2.56228488939458,1.64624189989987,2.89033160058254,0.988779870937496,3.03658649531814,1.76922110389975,1.94120219936891,1.76673214768315,1.93950101254089,3.72783522436244,0.292780797011547,1.46612694769419,5.36459815938042,0,0,0.127070227073065,1.49790639404823,2.74500361691176,0.753926112677186,1.73824320192276,2.04572365864264,0.62336413367868,2.43361894601636,2.95334155165917,2.73695335342205,1.0108910337347,1.47309299120532,2.21204753036596,1.60931473103431,2.16074555766419,2.10986744970001,1.02054748726992,1.5373646434182,1.49922759295566,1.03481348295606,0.646703978798527,1.51284864134255,1.58356011747554,1.31517439456545,0.834141747676794,2.089512999133,2.05782136407943,2.38841120182192,0,0,0.568326998791185,1.86413195281952,1.17263029990548,2.34080679899319,0.946978942340841,1.77087808572663,1.85120535464854,2.32533944750408,2.14618721119695,1.75148013550754,1.81015834904829,3.2833492815819,3.40489000092594,2.19299981137998,3.73235195994786,2.68412837520744,1.89260953707715,0.720332286654991,8.26046957459495,3.17340679996253,1.49301775374664,1.85789337488351,1.28867461322093,1.61346819698674,1.77902435075896,1.71203063501303,5.21981967698963,3.29397909448022,3.77002813200404,2.58643413653496,4.28920991662064,5.39291645192533,5.40345124686736,5.97423819763102,1.70701110857774,1.37098215131675,5.63538678365402,1.83286195060783,3.49114476901726,2.45475369616115,2.59269802209455,2.80459281161244,5.80895293013087,5.18268088471562,0.592905254174298,0.500535317148282,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,0.324270453550071,0.549122826376163,0,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,1.47802552133284,1.51593129416388,0.325929952884052,0.848725428875941,1.17345124144251,2.34508760418542,3.09456733151818,2.14647012643579,1.89162172927429,2.6575762757853,3.6674596791222,3.27726629431476,2.41758974612254,3.61622646453779,3.01582567878545,3.26343410291226,0.983528546038072,1.10374698521893,2.56880943980467,3.16471553798949,1.3114795630134,1.26235463602186,1.26203287766503,1.95219372148319,1.93881057959519,1.43381278771531,1.11399337041197,2.26461224631066,0.809621403349789,0.876767573733936,1.58115111178609,1.60660658210904,3.54850213020672,2.49291845134157,2.28041743095006,3.13443233647817,3.98235415019888,0.971122544619926,1.51161778482376,0.943025398779491,2.06711325016541,0.307435147943927,1.80899805217755,1.45413491791002,2.49548164869305,1.26414703174326,2.10837217149998,3.09406629744561,2.04263763452273,1.98067203434441,2.58717367565509,2.35770738534752,1.59606210278046,1.96205699362278,1.81003922662333,1.8267896946876,1.87737366450968,2.33015277950202,1.98475558249466,1.81374878235628,2.42196640043858,2.77439454669517,1.55184047204077,2.29797259643086,5.82961673259701,2.22510362412612,0.512612642393558,1.857481811669,0.925972636848558,0.376736914009382,0.683471138605126,0.915112692826091,0.509935289981566,0.419854356970974,0.552799895217695,4.77335309007557,1.42351197111511,1.82987520414164,1.29606408986162,2.29997125615916,1.74690050996942,1.88810084938749,2.72756403893609,5.75863072364865,6.35113369129785,10.5627683224777,0,1.04661582230785,2.15096037594227,2.52786544847262,1.93739735216597,2.19642963138012,2.11243029562357,2.21347454234715,1.78260885523708,0.483168241652012,0.864090018773596,0.316011120628178,1.21635129174099,1.23253148597793,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.590758108698309,0.504832249740738,0.228620419965,0.806609481094724,0.682205165178267,0.192423683280659,0.584384510907845,2.26730383615211,1.55390167361845,0.807424709485281,0.671538465456314,1.73870634628971,7.3196165425961,3.47988086107804,2.57242054894879,5.01572104035363,2.25900737046827,0.920650473014354,3.43737308063638,1.20297227640581,1.37016503954128,2.2661816921691,2.02506750069542,3.15224842256954,0.453142408984205,3.62432218226274,0.103787347584177,0.399024873401031,1.36586884603307,2.18796045361465,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.64183841918363,0.252697211763798,1.52087579934144,1.88626341386076,0.936415074698824,1.72867911493147,2.12511235135769,0.952587382566147,1.50649623728312,2.50781986602817,1.64834360321323,1.47198920134397,3.08582327146874,1.95223386775271,1.1921809497366,1.30811774969096,1.31753132581463,1.94613598150856,2.0122077016005,1.31534855718921,2.30866993537965,1.68342681497322,2.01679530811096,1.97008964751127,1.63692417267876,1.70430525304563,1.35034627686799,1.74867404556562,1.16965804222704,1.07435527024149,1.53030665655075,4.41182838239031,0.927471342481686|short_description=p3@Tmco3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:234076
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8BH01
|association_with_transcript=224bp_to_ENSMUST00000045229,ENSMUST00000084058,NM_172282,uc009kxm.1,uc009kxn.1,uc009kxo.1_5end
|cluster_id=chr8:13288237..13288263,+
|description=CAGE_peak_3_at_Tmco3_5end
|id=chr8:13288237..13288263,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-07,31
|phase1_expression=3.52327463630547,4.53668029931169,4.54999239389536,4.23449895829562,5.50985302940982,6.88305014838748,8.41005506143892,0.387369970324729,0.281577444303333,0.234064526321993,0.34243593645101,0.478632953972018,0,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,2.63634199468316,0.595745707205312,1.82839852397255,6.55968933452967,6.8822784320151,7.46501553349526,6.46142994238612,6.03319451520489,14.4417798786844,7.81293402255785,9.09095093686749,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,7.95210098400125,4.6880120671428,4.18818995179039,7.64700934440319,4.09827290975067,11.1667381197165,3.14742044938943,4.35920804243913,3.67093504323363,3.9119567217402,2.39827672018491,6.15121311656521,3.11087838518853,3.91961980551015,2.87505128729943,0,0,0,3.08711323243136,1.71920063963254,3.09403255366465,2.02316460859598,0,1.26766280701236,3.38844532069132,0.889294796111139,2.2497492932035,0.988866362566974,4.9733608046227,5.09320187881288,5.37905627450176,0.622137673850866,0.405017814995072,1.05162480675691,3.71346279724945,2.87129103237098,0.734944795289724,1.0543001812006,1.83843757322004,3.30347642998166,2.55374676170375,2.30409799884365,1.97829431595291,1.55528994124096,0,2.23346399201105,1.68828783009504,2.44477196442896,1.47314292736834,2.27794689278565,1.86399445825301,1.66597625333005,3.09843396437821,2.89864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,2.10666630197628,1.1930122580464,2.59786004602869,2.47337702157238,2.95771181531029,3.84979432242953,12.7402619853323,0,1.29894624606728,1.52015919285059,1.01104889002957,2.2836775943812,0.776813650941515,2.07818994690755,2.08182392119363,1.52232739156071,0.922461989024234,2.56228488939458,1.64624189989987,2.89033160058254,0.988779870937496,3.03658649531814,1.76922110389975,1.94120219936891,1.76673214768315,1.93950101254089,3.72783522436244,0.292780797011547,1.46612694769419,5.36459815938042,0,0,0.127070227073065,1.49790639404823,2.74500361691176,0.753926112677186,1.73824320192276,2.04572365864264,0.62336413367868,2.43361894601636,2.95334155165917,2.73695335342205,1.0108910337347,1.47309299120532,2.21204753036596,1.60931473103431,2.16074555766419,2.10986744970001,1.02054748726992,1.5373646434182,1.49922759295566,1.03481348295606,0.646703978798527,1.51284864134255,1.58356011747554,1.31517439456545,0.834141747676794,2.089512999133,2.05782136407943,2.38841120182192,0,0,0.568326998791185,1.86413195281952,1.17263029990548,2.34080679899319,0.946978942340841,1.77087808572663,1.85120535464854,2.32533944750408,2.14618721119695,1.75148013550754,1.81015834904829,3.2833492815819,3.40489000092594,2.19299981137998,3.73235195994786,2.68412837520744,1.89260953707715,0.720332286654991,8.26046957459495,3.17340679996253,1.49301775374664,1.85789337488351,1.28867461322093,1.61346819698674,1.77902435075896,1.71203063501303,5.21981967698963,3.29397909448022,3.77002813200404,2.58643413653496,4.28920991662064,5.39291645192533,5.40345124686736,5.97423819763102,1.70701110857774,1.37098215131675,5.63538678365402,1.83286195060783,3.49114476901726,2.45475369616115,2.59269802209455,2.80459281161244,5.80895293013087,5.18268088471562,0.592905254174298,0.500535317148282,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,0.324270453550071,0.549122826376163,0,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,1.47802552133284,1.51593129416388,0.325929952884052,0.848725428875941,1.17345124144251,2.34508760418542,3.09456733151818,2.14647012643579,1.89162172927429,2.6575762757853,3.6674596791222,3.27726629431476,2.41758974612254,3.61622646453779,3.01582567878545,3.26343410291226,0.983528546038072,1.10374698521893,2.56880943980467,3.16471553798949,1.3114795630134,1.26235463602186,1.26203287766503,1.95219372148319,1.93881057959519,1.43381278771531,1.11399337041197,2.26461224631066,0.809621403349789,0.876767573733936,1.58115111178609,1.60660658210904,3.54850213020672,2.49291845134157,2.28041743095006,3.13443233647817,3.98235415019888,0.971122544619926,1.51161778482376,0.943025398779491,2.06711325016541,0.307435147943927,1.80899805217755,1.45413491791002,2.49548164869305,1.26414703174326,2.10837217149998,3.09406629744561,2.04263763452273,1.98067203434441,2.58717367565509,2.35770738534752,1.59606210278046,1.96205699362278,1.81003922662333,1.8267896946876,1.87737366450968,2.33015277950202,1.98475558249466,1.81374878235628,2.42196640043858,2.77439454669517,1.55184047204077,2.29797259643086,5.82961673259701,2.22510362412612,0.512612642393558,1.857481811669,0.925972636848558,0.376736914009382,0.683471138605126,0.915112692826091,0.509935289981566,0.419854356970974,0.552799895217695,4.77335309007557,1.42351197111511,1.82987520414164,1.29606408986162,2.29997125615916,1.74690050996942,1.88810084938749,2.72756403893609,5.75863072364865,6.35113369129785,10.5627683224777,0,1.04661582230785,2.15096037594227,2.52786544847262,1.93739735216597,2.19642963138012,2.11243029562357,2.21347454234715,1.78260885523708,0.483168241652012,0.864090018773596,0.316011120628178,1.21635129174099,1.23253148597793,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.590758108698309,0.504832249740738,0.228620419965,0.806609481094724,0.682205165178267,0.192423683280659,0.584384510907845,2.26730383615211,1.55390167361845,0.807424709485281,0.671538465456314,1.73870634628971,7.3196165425961,3.47988086107804,2.57242054894879,5.01572104035363,2.25900737046827,0.920650473014354,3.43737308063638,1.20297227640581,1.37016503954128,2.2661816921691,2.02506750069542,3.15224842256954,0.453142408984205,3.62432218226274,0.103787347584177,0.399024873401031,1.36586884603307,2.18796045361465,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.64183841918363,0.252697211763798,1.52087579934144,1.88626341386076,0.936415074698824,1.72867911493147,2.12511235135769,0.952587382566147,1.50649623728312,2.50781986602817,1.64834360321323,1.47198920134397,3.08582327146874,1.95223386775271,1.1921809497366,1.30811774969096,1.31753132581463,1.94613598150856,2.0122077016005,1.31534855718921,2.30866993537965,1.68342681497322,2.01679530811096,1.97008964751127,1.63692417267876,1.70430525304563,1.35034627686799,1.74867404556562,1.16965804222704,1.07435527024149,1.53030665655075,4.41182838239031,0.927471342481686
|short_description=p3@Tmco3
}}

Revision as of 04:54, 6 August 2015

Short description:p3@Tmco3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmco3_5end
Coexpression cluster:NA
Association with transcript: 224bp_to_ENSMUST00000045229, ENSMUST00000084058, NM_172282, uc009kxm.1, uc009kxn.1, uc009kxo.1_5end
EntrezGene:234076
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmco3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B914.44
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G13.40
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H15.18
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.31e-0731
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:13288237..13288263,%2B&oldid=3981792"