FFCP PHASE1:Mm9::chr8:23704435..23704453,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22335|HGNC=|UniProt=Q5EBQ0,Q3TX38,Q60931|association_with_transcript=-150bp_to_NM_001198998,NM_011696,uc009ldh.2,uc012gbf.1_5end|description=CAGE_peak_2_at_Vdac3_5end|id=chr8:23704435..23704453,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!3.59e-07!18;UBERON:0005564!3.59e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.10e-07,18;UBERON:0005564,3.10e-07,18;UBERON:0000473,9.67e-07,14|phase1_expression=5.44506080156299,3.14077866875425,2.72999543633722,2.11724947914781,2.00358291978539,3.3575854382378,2.10251376535973,1.03298658753261,1.97104211012333,2.80877431586392,1.88339765048055,1.83475965689274,1.19840510951844,1.48614684112296,3.33109761815663,2.63217847606774,0.699561878128147,3.47008381894061,2.60517423850904,0.84877930359606,1.02051948181284,2.78014663362479,1.04479915655574,3.51983330145495,5.04700418347774,2.29692785646008,2.58457197695445,2.58565479223067,2.66032787238923,2.26827116783938,2.43903561720835,1.27006134691926,0.61506478758457,0,4.91047753577167,3.32469290716985,3.67504841272264,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,0,1.45653105909346,0.503587271902309,1.01376931219515,0.367093504323363,7.04152209913235,3.70642765846759,4.61340983742391,5.05517737593137,2.2397827460058,2.87505128729943,4.19456515144341,6.5282592781021,1.34437519656986,1.28629718017973,2.57880095944881,0,3.43937983461316,2.11596391708813,5.07065122804943,1.35537812827653,0.889294796111139,0,0,0.7104801149461,1.49800055259202,1.92109152660777,3.00699875694585,4.18518408828241,2.10324961351382,1.71390590642282,1.98781686856452,2.57230678351403,3.25874601462004,2.75765635983006,0,0.383062014255563,0.46081959976873,2.50583946687368,2.92760459527711,4.16730696445408,0,0,0.45839474333043,1.47314292736834,1.99320353118744,2.23679334990361,1.06016670666458,1.43585964202892,0.579728977403356,2.58127163094416,2.03991400112325,0,1.29955283489534,0.448026887097336,1.54488862144927,0.852151612890289,2.59786004602869,1.7666978725517,4.08445917352373,0,0,0,3.030874574157,2.02687892380079,2.02209778005913,0.68510327831436,1.03575153458869,0.742210695324124,3.81667718885499,0.608930956624282,2.53677046981664,0.753613202763113,1.52865319276416,1.13099932196708,0.247194967734374,0.86759614151947,1.76922110389975,1.61766849947409,2.65009822152472,1.45462575940567,18.6391761218122,1.17112318804619,0,2.81002760729451,9.82484020948546,5.99902730993408,6.98886248901856,0.149790639404823,0,1.38219787324151,0,0.511430914660661,0.83115217823824,0.648965052271031,2.74966282395854,1.49288364732112,1.51633655060205,0.631325567659422,2.60240885925407,2.75882525320168,2.16074555766419,2.26057226753573,2.85753296435577,1.7935920839879,1.87403449119458,0.517406741478031,1.72454394346274,1.70195472151037,2.63926686245923,3.28793598641362,2.22437799380478,2.43776516565517,1.64625709126355,7.36426787228425,7.72434506044558,5.66165395652373,2.55747149456033,2.27838349789052,3.04883877975425,5.22179978236943,3.55117103377815,2.95146347621106,4.47374627373397,4.41814495025775,4.02410102099429,6.53885917256149,3.29119699826961,1.31333971263276,2.10778904819225,1.02339991197733,0.439100230582101,1.74468344388483,0.630869845692382,2.6755199218614,1.32167513193519,1.58670339998127,1.91959425481711,1.62565670302307,1.9330119198314,1.4117846723634,1.55664630691409,0.760902504450237,3.79623249235609,1.15289268306808,1.25667604400135,2.58643413653496,0.974820435595601,0.898819408654221,2.59365659849633,4.97853183135918,3.60369011810855,1.48523066392647,2.25415471346161,0.610953983535943,1.16371492300575,2.10407459670956,2.21327879934901,1.18088118383682,1.09899109488962,1.1105744752962,2.37162101669719,0.333690211432188,2.94838492669805,2.24862112384854,1.42002084971952,0.964708639009667,2.29163266603278,0.863088412352432,2.10775794807546,2.47105271869273,0,3.34926852901653,1.5601883655728,1.01031551178845,1.4351793081753,3.37710464954357,0.554259570499814,4.16881105895066,2.60743962307241,4.41337223015489,3.98973422090454,2.01007508930179,0.476087281772027,1.17080188714679,1.89162172927429,1.10732344824387,1.43509291791738,1.3109065177259,0.345369963731791,0.433947175744535,0,0,0,1.93155722413313,0.642202359951168,0.586058432961016,1.14754461763673,1.76729649043061,2.52406575533005,3.90438744296638,1.07711698866399,0.955875191810208,2.00518806674155,2.54768877709949,3.23848561339915,2.04579100537918,1.97643888973262,0.642642632843614,1.13552068166615,3.02711526234334,4.0721739838394,0.824850614862677,3.98235415019888,1.45668381692989,3.93020624054176,3.01768127609437,2.95301892880773,0.614870295887855,2.06742634534577,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,0,3.06103859853227,5.17434735131018,4.92975180572662,4.96552654198366,4.45922044005176,3.9491764944509,6.08929898229199,0.938686832254841,0,1.98475558249466,0.98931751764888,1.13025098687134,1.5078231232039,1.55184047204077,1.47726809770555,1.1659233465194,0.741701208042039,1.19609616558497,2.68302928352189,1.66675074632741,2.26042148405629,1.36694227721025,1.14389086603261,10.7086410896129,11.6159705428636,10.6413979829406,0.954670618015114,2.84702394223022,2.03319467126849,1.83609079397062,2.29997125615916,1.31017538247707,2.56242258131159,1.90102948168273,3.40282724579238,13.6095721956383,0,3.94585057078933,18.3905351634094,12.7403037651965,10.5003641705786,11.8827037599513,10.1373675294467,12.4398672964499,8.07267186032491,7.02557607652263,5.31485065817213,3.74439008135225,1.89606672376907,8.10900861160657,6.67621221571377,3.89762468933385,4.11761400035207,1.39076948346885,2.88469078847925,2.06765338044408,2.72609414859999,4.19137436602499,2.62148081355785,2.33898913775406,2.40529604100824,2.92192255453922,2.0405734525369,0.887943813496259,1.70456327558004,1.51096154727671,0.772758376128762,0.93841237725591,1.28206136987086,1.07184189539533,1.50471631210609,0.564751842617067,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,1.86817225651518,1.59609949360412,3.75613932659095,2.18796045361465,2.72497111416377,2.20612210140017,1.55572709461131,1.44224540067226,0.962757628775446,1.01078884705519,1.52087579934144,1.50901073108861,1.591905626988,1.72867911493147,1.20614484806788,0.476293691283074,1.62238056322798,1.15745532278223,1.64834360321323,1.32479028120958,1.02860775715625,1.06485483695602,1.43061713968393,1.59881058295561,2.07040636913727,2.03075058940024,2.0122077016005,0.526139422875686,2.58027816307137,2.80571135828869,0.474540072496697,1.87158516513571,2.04615521584845,1.70430525304563,1.15743966588685,2.74791635731741,1.63752125911786,0.859484216193193,2.48674831689496,1.10295709559758,1.39120701372253|short_description=p2@Vdac3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22335 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5EBQ0,uniprot:Q3TX38,uniprot:Q60931 | |||
|association_with_transcript=-150bp_to_NM_001198998,NM_011696,uc009ldh.2,uc012gbf.1_5end | |||
|cluster_id=chr8:23704435..23704453,- | |||
|description=CAGE_peak_2_at_Vdac3_5end | |||
|id=chr8:23704435..23704453,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!3.59e-07!18;UBERON:0005564!3.59e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.10e-07,18;UBERON:0005564,3.10e-07,18;UBERON:0000473,9.67e-07,14 | |||
|phase1_expression=5.44506080156299,3.14077866875425,2.72999543633722,2.11724947914781,2.00358291978539,3.3575854382378,2.10251376535973,1.03298658753261,1.97104211012333,2.80877431586392,1.88339765048055,1.83475965689274,1.19840510951844,1.48614684112296,3.33109761815663,2.63217847606774,0.699561878128147,3.47008381894061,2.60517423850904,0.84877930359606,1.02051948181284,2.78014663362479,1.04479915655574,3.51983330145495,5.04700418347774,2.29692785646008,2.58457197695445,2.58565479223067,2.66032787238923,2.26827116783938,2.43903561720835,1.27006134691926,0.61506478758457,0,4.91047753577167,3.32469290716985,3.67504841272264,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,0,1.45653105909346,0.503587271902309,1.01376931219515,0.367093504323363,7.04152209913235,3.70642765846759,4.61340983742391,5.05517737593137,2.2397827460058,2.87505128729943,4.19456515144341,6.5282592781021,1.34437519656986,1.28629718017973,2.57880095944881,0,3.43937983461316,2.11596391708813,5.07065122804943,1.35537812827653,0.889294796111139,0,0,0.7104801149461,1.49800055259202,1.92109152660777,3.00699875694585,4.18518408828241,2.10324961351382,1.71390590642282,1.98781686856452,2.57230678351403,3.25874601462004,2.75765635983006,0,0.383062014255563,0.46081959976873,2.50583946687368,2.92760459527711,4.16730696445408,0,0,0.45839474333043,1.47314292736834,1.99320353118744,2.23679334990361,1.06016670666458,1.43585964202892,0.579728977403356,2.58127163094416,2.03991400112325,0,1.29955283489534,0.448026887097336,1.54488862144927,0.852151612890289,2.59786004602869,1.7666978725517,4.08445917352373,0,0,0,3.030874574157,2.02687892380079,2.02209778005913,0.68510327831436,1.03575153458869,0.742210695324124,3.81667718885499,0.608930956624282,2.53677046981664,0.753613202763113,1.52865319276416,1.13099932196708,0.247194967734374,0.86759614151947,1.76922110389975,1.61766849947409,2.65009822152472,1.45462575940567,18.6391761218122,1.17112318804619,0,2.81002760729451,9.82484020948546,5.99902730993408,6.98886248901856,0.149790639404823,0,1.38219787324151,0,0.511430914660661,0.83115217823824,0.648965052271031,2.74966282395854,1.49288364732112,1.51633655060205,0.631325567659422,2.60240885925407,2.75882525320168,2.16074555766419,2.26057226753573,2.85753296435577,1.7935920839879,1.87403449119458,0.517406741478031,1.72454394346274,1.70195472151037,2.63926686245923,3.28793598641362,2.22437799380478,2.43776516565517,1.64625709126355,7.36426787228425,7.72434506044558,5.66165395652373,2.55747149456033,2.27838349789052,3.04883877975425,5.22179978236943,3.55117103377815,2.95146347621106,4.47374627373397,4.41814495025775,4.02410102099429,6.53885917256149,3.29119699826961,1.31333971263276,2.10778904819225,1.02339991197733,0.439100230582101,1.74468344388483,0.630869845692382,2.6755199218614,1.32167513193519,1.58670339998127,1.91959425481711,1.62565670302307,1.9330119198314,1.4117846723634,1.55664630691409,0.760902504450237,3.79623249235609,1.15289268306808,1.25667604400135,2.58643413653496,0.974820435595601,0.898819408654221,2.59365659849633,4.97853183135918,3.60369011810855,1.48523066392647,2.25415471346161,0.610953983535943,1.16371492300575,2.10407459670956,2.21327879934901,1.18088118383682,1.09899109488962,1.1105744752962,2.37162101669719,0.333690211432188,2.94838492669805,2.24862112384854,1.42002084971952,0.964708639009667,2.29163266603278,0.863088412352432,2.10775794807546,2.47105271869273,0,3.34926852901653,1.5601883655728,1.01031551178845,1.4351793081753,3.37710464954357,0.554259570499814,4.16881105895066,2.60743962307241,4.41337223015489,3.98973422090454,2.01007508930179,0.476087281772027,1.17080188714679,1.89162172927429,1.10732344824387,1.43509291791738,1.3109065177259,0.345369963731791,0.433947175744535,0,0,0,1.93155722413313,0.642202359951168,0.586058432961016,1.14754461763673,1.76729649043061,2.52406575533005,3.90438744296638,1.07711698866399,0.955875191810208,2.00518806674155,2.54768877709949,3.23848561339915,2.04579100537918,1.97643888973262,0.642642632843614,1.13552068166615,3.02711526234334,4.0721739838394,0.824850614862677,3.98235415019888,1.45668381692989,3.93020624054176,3.01768127609437,2.95301892880773,0.614870295887855,2.06742634534577,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,0,3.06103859853227,5.17434735131018,4.92975180572662,4.96552654198366,4.45922044005176,3.9491764944509,6.08929898229199,0.938686832254841,0,1.98475558249466,0.98931751764888,1.13025098687134,1.5078231232039,1.55184047204077,1.47726809770555,1.1659233465194,0.741701208042039,1.19609616558497,2.68302928352189,1.66675074632741,2.26042148405629,1.36694227721025,1.14389086603261,10.7086410896129,11.6159705428636,10.6413979829406,0.954670618015114,2.84702394223022,2.03319467126849,1.83609079397062,2.29997125615916,1.31017538247707,2.56242258131159,1.90102948168273,3.40282724579238,13.6095721956383,0,3.94585057078933,18.3905351634094,12.7403037651965,10.5003641705786,11.8827037599513,10.1373675294467,12.4398672964499,8.07267186032491,7.02557607652263,5.31485065817213,3.74439008135225,1.89606672376907,8.10900861160657,6.67621221571377,3.89762468933385,4.11761400035207,1.39076948346885,2.88469078847925,2.06765338044408,2.72609414859999,4.19137436602499,2.62148081355785,2.33898913775406,2.40529604100824,2.92192255453922,2.0405734525369,0.887943813496259,1.70456327558004,1.51096154727671,0.772758376128762,0.93841237725591,1.28206136987086,1.07184189539533,1.50471631210609,0.564751842617067,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,1.86817225651518,1.59609949360412,3.75613932659095,2.18796045361465,2.72497111416377,2.20612210140017,1.55572709461131,1.44224540067226,0.962757628775446,1.01078884705519,1.52087579934144,1.50901073108861,1.591905626988,1.72867911493147,1.20614484806788,0.476293691283074,1.62238056322798,1.15745532278223,1.64834360321323,1.32479028120958,1.02860775715625,1.06485483695602,1.43061713968393,1.59881058295561,2.07040636913727,2.03075058940024,2.0122077016005,0.526139422875686,2.58027816307137,2.80571135828869,0.474540072496697,1.87158516513571,2.04615521584845,1.70430525304563,1.15743966588685,2.74791635731741,1.63752125911786,0.859484216193193,2.48674831689496,1.10295709559758,1.39120701372253 | |||
|short_description=p2@Vdac3 | |||
}} |
Revision as of 06:23, 6 August 2015
Short description: | p2@Vdac3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vdac3_5end |
Coexpression cluster: | NA |
Association with transcript: | -150bp_to_NM_001198998, NM_011696, uc009ldh.2, uc012gbf.1_5end |
EntrezGene: | 22335 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 3.10e-07 | 18 |
gonad primordium | 3.10e-07 | 18 |
testis | 9.67e-07 | 14 |