FFCP PHASE1:Mm9::chr9:103130750..103130767,-: Difference between revisions
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{{FFCP|EntrezGene=22041|HGNC=|MCL_coexpression_id=157|UniProt=D3YYR8|association_with_transcript=4bp_to_ENSMUST00000126359_5end|description=CAGE_peak_12_at_Trf_5end|id=chr9:103130750..103130767,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!3.40e-17!25;UBERON:0002330!3.40e-17!25;UBERON:0002107!8.63e-14!22;UBERON:0007499!8.63e-14!22;UBERON:0006925!8.63e-14!22;UBERON:0009497!8.63e-14!22;UBERON:0000015!8.63e-14!22;UBERON:0002423!8.63e-14!22;UBERON:0006235!8.63e-14!22;UBERON:0008835!8.63e-14!22;UBERON:0003894!8.63e-14!22;UBERON:0004161!8.63e-14!22;UBERON:0008836!8.63e-14!22;UBERON:0009854!4.31e-13!23;UBERON:0009856!4.31e-13!23;UBERON:0005631!5.08e-10!3;UBERON:0000478!5.08e-10!3;UBERON:0000158!5.08e-10!3;UBERON:0002530!6.02e-09!65;UBERON:0005256!1.35e-07!47;UBERON:0001911!2.29e-07!2;UBERON:0000076!2.29e-07!2;UBERON:0005333!2.29e-07!2;UBERON:0008425!2.29e-07!2;UBERON:0005311!2.29e-07!2;UBERON:0002368!2.66e-07!60;UBERON:0001987!3.22e-07!2;UBERON:0003124!3.22e-07!2;UBERON:0004340!3.22e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.97e-44,3;UBERON:0000478,8.97e-44,3;UBERON:0000158,8.97e-44,3;UBERON:0001911,1.73e-30,2;UBERON:0000076,1.73e-30,2;UBERON:0005333,1.73e-30,2;UBERON:0008425,1.73e-30,2;UBERON:0005311,1.73e-30,2;UBERON:0001987,9.35e-30,2;UBERON:0003124,9.35e-30,2;UBERON:0004340,9.35e-30,2;UBERON:0003100,8.15e-22,11;UBERON:0000305,9.51e-16,1;UBERON:0005795,1.87e-15,4;UBERON:0000995,1.87e-15,4;UBERON:0003975,1.41e-12,5;UBERON:0003134,3.14e-08,8;UBERON:0007023,1.36e-07,51;UBERON:0004175,2.03e-07,9;UBERON:0000474,2.03e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,4.44950941921873,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.810676133875177,1.09824565275233,0,0.372140947668503,0,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.0305635620851,35.043966780701,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,17.5820618816971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Trf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22041 | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YYR8 | |||
|association_with_transcript=4bp_to_ENSMUST00000126359_5end | |||
|cluster_id=chr9:103130750..103130767,- | |||
|description=CAGE_peak_12_at_Trf_5end | |||
|id=chr9:103130750..103130767,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!3.40e-17!25;UBERON:0002330!3.40e-17!25;UBERON:0002107!8.63e-14!22;UBERON:0007499!8.63e-14!22;UBERON:0006925!8.63e-14!22;UBERON:0009497!8.63e-14!22;UBERON:0000015!8.63e-14!22;UBERON:0002423!8.63e-14!22;UBERON:0006235!8.63e-14!22;UBERON:0008835!8.63e-14!22;UBERON:0003894!8.63e-14!22;UBERON:0004161!8.63e-14!22;UBERON:0008836!8.63e-14!22;UBERON:0009854!4.31e-13!23;UBERON:0009856!4.31e-13!23;UBERON:0005631!5.08e-10!3;UBERON:0000478!5.08e-10!3;UBERON:0000158!5.08e-10!3;UBERON:0002530!6.02e-09!65;UBERON:0005256!1.35e-07!47;UBERON:0001911!2.29e-07!2;UBERON:0000076!2.29e-07!2;UBERON:0005333!2.29e-07!2;UBERON:0008425!2.29e-07!2;UBERON:0005311!2.29e-07!2;UBERON:0002368!2.66e-07!60;UBERON:0001987!3.22e-07!2;UBERON:0003124!3.22e-07!2;UBERON:0004340!3.22e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.97e-44,3;UBERON:0000478,8.97e-44,3;UBERON:0000158,8.97e-44,3;UBERON:0001911,1.73e-30,2;UBERON:0000076,1.73e-30,2;UBERON:0005333,1.73e-30,2;UBERON:0008425,1.73e-30,2;UBERON:0005311,1.73e-30,2;UBERON:0001987,9.35e-30,2;UBERON:0003124,9.35e-30,2;UBERON:0004340,9.35e-30,2;UBERON:0003100,8.15e-22,11;UBERON:0000305,9.51e-16,1;UBERON:0005795,1.87e-15,4;UBERON:0000995,1.87e-15,4;UBERON:0003975,1.41e-12,5;UBERON:0003134,3.14e-08,8;UBERON:0007023,1.36e-07,51;UBERON:0004175,2.03e-07,9;UBERON:0000474,2.03e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,4.44950941921873,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.810676133875177,1.09824565275233,0,0.372140947668503,0,0.757736633841335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.0305635620851,35.043966780701,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.17335854031855,17.5820618816971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Trf | |||
}} |
Revision as of 11:02, 4 August 2015
Short description: | p12@Trf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Trf_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | 4bp_to_ENSMUST00000126359_5end |
EntrezGene: | 22041 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.97e-44 | 3 |
extraembryonic structure | 8.97e-44 | 3 |
membranous layer | 8.97e-44 | 3 |
mammary gland | 1.73e-30 | 2 |
external ectoderm | 1.73e-30 | 2 |
mammary bud | 1.73e-30 | 2 |
mammary ridge | 1.73e-30 | 2 |
mammary placode | 1.73e-30 | 2 |
placenta | 9.35e-30 | 2 |
chorion | 9.35e-30 | 2 |
allantois | 9.35e-30 | 2 |
female organism | 8.15e-22 | 11 |
amnion | 9.51e-16 | 1 |
embryonic uterus | 1.87e-15 | 4 |
uterus | 1.87e-15 | 4 |
internal female genitalia | 1.41e-12 | 5 |
female reproductive organ | 3.14e-08 | 8 |
adult organism | 1.36e-07 | 51 |
internal genitalia | 2.03e-07 | 9 |
female reproductive system | 2.03e-07 | 9 |