FFCP PHASE1:Mm9::chr9:46050554..46050575,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050554..46050575,+|id=chr9:46050554..46050575,+|ontology_enrichment_celltype=CL:0000239!5.24e-09!6;CL:0000677!5.24e-09!6;CL:0000212!5.24e-09!6;CL:0000584!5.24e-09!6;CL:0000075!1.54e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.85e-14,6;CL:0000677,2.85e-14,6;CL:0000584,2.85e-14,6;CL:0000075,4.03e-12,7;CL:0000066,1.29e-09,25;CL:0002563,2.97e-09,9;CL:0002251,2.97e-09,9;CL:0000682,2.23e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.58e-17!43;UBERON:0005409!7.10e-17!59;UBERON:0000344!2.91e-12!15;UBERON:0001242!1.17e-09!13;UBERON:0000060!1.17e-09!13;UBERON:0001262!1.17e-09!13;UBERON:0004786!1.17e-09!13;UBERON:0004923!9.26e-09!24;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0001007!2.64e-08!128;UBERON:0001555!2.64e-08!128;UBERON:0007026!2.64e-08!128;UBERON:0004921!4.22e-07!126;UBERON:0004185!4.22e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-38,31;UBERON:0005409,9.75e-28,47;UBERON:0000344,8.55e-21,15;UBERON:0001242,2.78e-16,13;UBERON:0001262,2.78e-16,13;UBERON:0004786,2.78e-16,13;UBERON:0004923,4.40e-14,24;UBERON:0001007,9.24e-14,116;UBERON:0001555,9.24e-14,116;UBERON:0007026,9.24e-14,116;UBERON:0004119,2.10e-13,118;UBERON:0000925,2.10e-13,118;UBERON:0006595,2.10e-13,118;UBERON:0004921,1.29e-11,114;UBERON:0003350,2.97e-09,9;UBERON:0004808,2.97e-09,9;UBERON:0001277,2.97e-09,9;UBERON:0002108,5.08e-09,4;UBERON:0000485,1.98e-07,11;UBERON:0000331,5.72e-07,3;UBERON:0002116,5.72e-07,3;UBERON:0001204,5.72e-07,3;UBERON:0001168,5.72e-07,3|phase1_expression=0,39.4342210632478,46.8649216571222,16.9379958331825,12.0214975187123,5.03637815735669,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.074786881864,86.7167082433903,30.4342940980961,18.9535278309993,45.4644300967226,3.80046838912748,2.01624103807945,7.98229838359097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7989966797713,1.61910957491345,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,7.16865406429684,0,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,16.9248362664668,0,0,0.128867461322093,0.605050573870028,3.7804267453628,9.3210556795154,24.2009821387701,30.79870453339,31.668236308834,19.8956472041151,19.8863368861503,9.88701349519644,9.07779809473716,9.75792238946399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,1.37280706594041,8.62609239164127,0.372140947668503,0,0,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,15.4484843413821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,1.52853794622324,0.404593039154462,0.165306911450672,2.87931536182433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0.758091635291392,0,0.377252682772152,0,0.640251524048693,0.114870937911227,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.436039249896986,0.0941093804153306,0.507687647350059,0.73171189149109,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0,1.16965804222704,1.07435527024149,0,0,0|short_description=p@chr9:46050554..46050575,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:46050554..46050575,+ | |||
|description=CAGE_peak_at_chr9:46050554..46050575,+ | |||
|id=chr9:46050554..46050575,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.24e-09!6;CL:0000677!5.24e-09!6;CL:0000212!5.24e-09!6;CL:0000584!5.24e-09!6;CL:0000075!1.54e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.85e-14,6;CL:0000677,2.85e-14,6;CL:0000584,2.85e-14,6;CL:0000075,4.03e-12,7;CL:0000066,1.29e-09,25;CL:0002563,2.97e-09,9;CL:0002251,2.97e-09,9;CL:0000682,2.23e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.58e-17!43;UBERON:0005409!7.10e-17!59;UBERON:0000344!2.91e-12!15;UBERON:0001242!1.17e-09!13;UBERON:0000060!1.17e-09!13;UBERON:0001262!1.17e-09!13;UBERON:0004786!1.17e-09!13;UBERON:0004923!9.26e-09!24;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0001007!2.64e-08!128;UBERON:0001555!2.64e-08!128;UBERON:0007026!2.64e-08!128;UBERON:0004921!4.22e-07!126;UBERON:0004185!4.22e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-38,31;UBERON:0005409,9.75e-28,47;UBERON:0000344,8.55e-21,15;UBERON:0001242,2.78e-16,13;UBERON:0001262,2.78e-16,13;UBERON:0004786,2.78e-16,13;UBERON:0004923,4.40e-14,24;UBERON:0001007,9.24e-14,116;UBERON:0001555,9.24e-14,116;UBERON:0007026,9.24e-14,116;UBERON:0004119,2.10e-13,118;UBERON:0000925,2.10e-13,118;UBERON:0006595,2.10e-13,118;UBERON:0004921,1.29e-11,114;UBERON:0003350,2.97e-09,9;UBERON:0004808,2.97e-09,9;UBERON:0001277,2.97e-09,9;UBERON:0002108,5.08e-09,4;UBERON:0000485,1.98e-07,11;UBERON:0000331,5.72e-07,3;UBERON:0002116,5.72e-07,3;UBERON:0001204,5.72e-07,3;UBERON:0001168,5.72e-07,3 | |||
|phase1_expression=0,39.4342210632478,46.8649216571222,16.9379958331825,12.0214975187123,5.03637815735669,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.074786881864,86.7167082433903,30.4342940980961,18.9535278309993,45.4644300967226,3.80046838912748,2.01624103807945,7.98229838359097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7989966797713,1.61910957491345,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,7.16865406429684,0,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,16.9248362664668,0,0,0.128867461322093,0.605050573870028,3.7804267453628,9.3210556795154,24.2009821387701,30.79870453339,31.668236308834,19.8956472041151,19.8863368861503,9.88701349519644,9.07779809473716,9.75792238946399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,1.37280706594041,8.62609239164127,0.372140947668503,0,0,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,15.4484843413821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,1.52853794622324,0.404593039154462,0.165306911450672,2.87931536182433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0.758091635291392,0,0.377252682772152,0,0.640251524048693,0.114870937911227,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.436039249896986,0.0941093804153306,0.507687647350059,0.73171189149109,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0,1.16965804222704,1.07435527024149,0,0,0 | |||
|short_description=p@chr9:46050554..46050575,+ | |||
}} |
Latest revision as of 05:37, 5 August 2015
Short description: | p@chr9:46050554..46050575, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050554..46050575, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.85e-14 | 6 |
gut absorptive cell | 2.85e-14 | 6 |
enterocyte | 2.85e-14 | 6 |
columnar/cuboidal epithelial cell | 4.03e-12 | 7 |
epithelial cell | 1.29e-09 | 25 |
intestinal epithelial cell | 2.97e-09 | 9 |
epithelial cell of alimentary canal | 2.97e-09 | 9 |
M cell of gut | 2.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.57e-38 | 31 |
gastrointestinal system | 9.75e-28 | 47 |
mucosa | 8.55e-21 | 15 |
intestinal mucosa | 2.78e-16 | 13 |
wall of intestine | 2.78e-16 | 13 |
gastrointestinal system mucosa | 2.78e-16 | 13 |
organ component layer | 4.40e-14 | 24 |
digestive system | 9.24e-14 | 116 |
digestive tract | 9.24e-14 | 116 |
primitive gut | 9.24e-14 | 116 |
endoderm-derived structure | 2.10e-13 | 118 |
endoderm | 2.10e-13 | 118 |
presumptive endoderm | 2.10e-13 | 118 |
subdivision of digestive tract | 1.29e-11 | 114 |
epithelium of mucosa | 2.97e-09 | 9 |
gastrointestinal system epithelium | 2.97e-09 | 9 |
intestinal epithelium | 2.97e-09 | 9 |
small intestine | 5.08e-09 | 4 |
simple columnar epithelium | 1.98e-07 | 11 |
ileal mucosa | 5.72e-07 | 3 |
ileum | 5.72e-07 | 3 |
mucosa of small intestine | 5.72e-07 | 3 |
wall of small intestine | 5.72e-07 | 3 |