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FFCP PHASE1:Mm9::chr9:56995908..56995958,-: Difference between revisions

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{{FFCP|EntrezGene=72774|HGNC=|UniProt=Q3U296|association_with_transcript=0bp_to_ENSMUST00000098692_5end|description=CAGE_peak_1_at_Neil1_5end|id=chr9:56995908..56995958,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.07e-11!102;UBERON:0000924!1.07e-11!102;UBERON:0006601!1.07e-11!102;UBERON:0001017!1.05e-10!73;UBERON:0005743!1.05e-10!73;UBERON:0000073!1.46e-10!75;UBERON:0001016!1.46e-10!75;UBERON:0007023!1.61e-08!51;UBERON:0000955!9.00e-08!50;UBERON:0006238!9.00e-08!50;UBERON:0002616!2.50e-07!49;UBERON:0000033!4.76e-07!63;UBERON:0001049!9.11e-07!52;UBERON:0005068!9.11e-07!52;UBERON:0006241!9.11e-07!52;UBERON:0007135!9.11e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.33e-12,95;UBERON:0000924,6.33e-12,95;UBERON:0006601,6.33e-12,95;UBERON:0001017,1.05e-10,73;UBERON:0001016,1.46e-10,75;UBERON:0007023,1.58e-08,51;UBERON:0010371,1.46e-07,73;UBERON:0000955,2.83e-07,47;UBERON:0006238,2.83e-07,47;UBERON:0000073,7.43e-07,54;UBERON:0002616,7.75e-07,46;UBERON:0001049,9.11e-07,52;UBERON:0005068,9.11e-07,52;UBERON:0006241,9.11e-07,52;UBERON:0007135,9.11e-07,52|phase1_expression=5.60520964866779,4.18770489167233,6.3699893514535,7.25914107136392,4.50806156951712,2.01455126294268,2.56973904655078,4.39019299701359,0.281577444303333,0,1.36974374580404,0.797721589953364,3.59521532855532,4.02133851127388,3.66420737997229,1.21485160433896,1.39912375625629,3.3123527362615,2.87940310572051,3.81950686618227,4.33720779770456,1.88652807281682,2.08959831311148,3.99981056983517,3.89995777814189,4.59385571292016,3.87685796543167,2.37018355954478,7.9809836171677,3.78045194639896,2.88249663851896,1.90509202037889,1.84519436275371,0,6.64358725427932,6.64938581433969,5.51257261908397,1.67412652294763,1.5626706890476,1.57057123192139,1.76469446409304,1.36609096991689,1.45653105909346,5.79125362687656,6.69087746048796,4.58866880404204,22.6893489860931,13.2995345392072,6.37089929929968,6.80504646759992,12.0388322597812,11.5002051491977,3.18786951509699,4.35217285206807,4.7053131879945,5.14518872071894,6.01720223871389,7.21940929188419,5.66486090406874,7.40587370980846,3.80298842103708,8.4711133017283,8.89294796111139,17.997994345628,32.6325899647102,18.4724829885986,11.6844043102178,15.3687322128622,4.87341177849845,4.45519596494579,4.41682418837902,5.71301968807607,5.74258206474195,3.79721477566358,4.50473713785711,7.35375029288017,7.70811166995721,6.76742891851495,5.37622866396852,4.48413378282659,5.85520919055422,4.68822033501084,8.09630697104005,7.87867654044352,7.33431589328689,5.00868595305235,3.55929201997757,4.28718725398191,3.71058347332602,6.42358260907677,7.8263411949453,3.44169550792555,0,9.71465744948071,14.9448576012964,8.51251085484938,5.61777680527007,3.74946709671727,1.03914401841148,1.41335829804136,3.80277233397037,1.28326477414318,2.54805239706646,0,3.68034769719064,4.56047757855178,5.56076889516262,3.9964357901671,5.69663344023778,8.31275978763019,2.94925055502431,3.34912026143355,4.38169444786511,7.53613202763113,4.46837087115678,5.90632979249475,7.91023896749996,13.8815382643115,2.65383165584962,3.07357014900077,5.96272099843063,3.87900202508178,27.9587641827183,12.8823550685081,11.1006754611131,6.13096932500619,2.63593273913025,4.79922184794726,3.04968544975355,12.5824137100051,7.32000964509802,3.8952849154988,9.56033761057521,7.41574826257959,7.48036960414416,8.76102820565891,3.46253837091075,4.97627882440372,6.31806896084187,7.15502310014011,3.90361328888111,3.67843367093557,3.96136685571768,3.76762044589288,3.74200745332303,5.25266253167884,3.74806898238915,11.3829483125167,2.15567992932842,3.9712276835242,4.39877810409872,3.5071317188412,4.44875598760957,7.3132954969655,5.76189981942242,3.98068533636986,4.91549231119264,3.86021860672073,2.55747149456033,2.27838349789052,3.75241695969754,2.88099298337624,2.84093682702252,5.3126342571799,4.16521204795921,4.18561100550734,4.29237442239391,3.03589890154641,3.12663714835613,5.41752631461014,4.9451973822972,4.23979963533464,7.02560368931362,5.50246316917524,8.41159794256509,5.65975368086064,13.2167513193519,8.99131926656051,2.13288250535234,3.0190767341857,3.60828891701861,4.84040459096022,5.78182913996663,8.17970192284004,8.54152310780121,4.77626968699632,5.52937459360593,6.96347652144028,6.62877896205008,7.19055526923377,10.3746263939853,9.35963984295526,3.60369011810855,4.22719496655997,2.25415471346161,3.86937522906097,4.46090720485539,3.22624771495465,5.24863258131335,6.05201606716369,9.41992367048249,7.15703550746443,8.00422093135302,2.50267658574141,0.589676985339609,1.79889689907883,2.02860121388503,0.964708639009667,2.80088436959562,2.5892652370573,1.94562272130042,1.92192989231657,2.87536413054709,2.60498663367952,5.92871578917665,9.09283960609602,9.68746033018326,8.68398338454061,6.46636165583116,2.27389694124582,3.58522948172457,4.58311731593008,6.57132695207806,4.69017520837084,7.61739650835244,5.65887578787617,6.7783111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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:72774
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3U296
|association_with_transcript=0bp_to_ENSMUST00000098692_5end
|cluster_id=chr9:56995908..56995958,-
|description=CAGE_peak_1_at_Neil1_5end
|id=chr9:56995908..56995958,-
|ontology_enrichment_celltype=
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|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.33e-12,95;UBERON:0000924,6.33e-12,95;UBERON:0006601,6.33e-12,95;UBERON:0001017,1.05e-10,73;UBERON:0001016,1.46e-10,75;UBERON:0007023,1.58e-08,51;UBERON:0010371,1.46e-07,73;UBERON:0000955,2.83e-07,47;UBERON:0006238,2.83e-07,47;UBERON:0000073,7.43e-07,54;UBERON:0002616,7.75e-07,46;UBERON:0001049,9.11e-07,52;UBERON:0005068,9.11e-07,52;UBERON:0006241,9.11e-07,52;UBERON:0007135,9.11e-07,52
|phase1_expression=5.60520964866779,4.18770489167233,6.3699893514535,7.25914107136392,4.50806156951712,2.01455126294268,2.56973904655078,4.39019299701359,0.281577444303333,0,1.36974374580404,0.797721589953364,3.59521532855532,4.02133851127388,3.66420737997229,1.21485160433896,1.39912375625629,3.3123527362615,2.87940310572051,3.81950686618227,4.33720779770456,1.88652807281682,2.08959831311148,3.99981056983517,3.89995777814189,4.59385571292016,3.87685796543167,2.37018355954478,7.9809836171677,3.78045194639896,2.88249663851896,1.90509202037889,1.84519436275371,0,6.64358725427932,6.64938581433969,5.51257261908397,1.67412652294763,1.5626706890476,1.57057123192139,1.76469446409304,1.36609096991689,1.45653105909346,5.79125362687656,6.69087746048796,4.58866880404204,22.6893489860931,13.2995345392072,6.37089929929968,6.80504646759992,12.0388322597812,11.5002051491977,3.18786951509699,4.35217285206807,4.7053131879945,5.14518872071894,6.01720223871389,7.21940929188419,5.66486090406874,7.40587370980846,3.80298842103708,8.4711133017283,8.89294796111139,17.997994345628,32.6325899647102,18.4724829885986,11.6844043102178,15.3687322128622,4.87341177849845,4.45519596494579,4.41682418837902,5.71301968807607,5.74258206474195,3.79721477566358,4.50473713785711,7.35375029288017,7.70811166995721,6.76742891851495,5.37622866396852,4.48413378282659,5.85520919055422,4.68822033501084,8.09630697104005,7.87867654044352,7.33431589328689,5.00868595305235,3.55929201997757,4.28718725398191,3.71058347332602,6.42358260907677,7.8263411949453,3.44169550792555,0,9.71465744948071,14.9448576012964,8.51251085484938,5.61777680527007,3.74946709671727,1.03914401841148,1.41335829804136,3.80277233397037,1.28326477414318,2.54805239706646,0,3.68034769719064,4.56047757855178,5.56076889516262,3.9964357901671,5.69663344023778,8.31275978763019,2.94925055502431,3.34912026143355,4.38169444786511,7.53613202763113,4.46837087115678,5.90632979249475,7.91023896749996,13.8815382643115,2.65383165584962,3.07357014900077,5.96272099843063,3.87900202508178,27.9587641827183,12.8823550685081,11.1006754611131,6.13096932500619,2.63593273913025,4.79922184794726,3.04968544975355,12.5824137100051,7.32000964509802,3.8952849154988,9.56033761057521,7.41574826257959,7.48036960414416,8.76102820565891,3.46253837091075,4.97627882440372,6.31806896084187,7.15502310014011,3.90361328888111,3.67843367093557,3.96136685571768,3.76762044589288,3.74200745332303,5.25266253167884,3.74806898238915,11.3829483125167,2.15567992932842,3.9712276835242,4.39877810409872,3.5071317188412,4.44875598760957,7.3132954969655,5.76189981942242,3.98068533636986,4.91549231119264,3.86021860672073,2.55747149456033,2.27838349789052,3.75241695969754,2.88099298337624,2.84093682702252,5.3126342571799,4.16521204795921,4.18561100550734,4.29237442239391,3.03589890154641,3.12663714835613,5.41752631461014,4.9451973822972,4.23979963533464,7.02560368931362,5.50246316917524,8.41159794256509,5.65975368086064,13.2167513193519,8.99131926656051,2.13288250535234,3.0190767341857,3.60828891701861,4.84040459096022,5.78182913996663,8.17970192284004,8.54152310780121,4.77626968699632,5.52937459360593,6.96347652144028,6.62877896205008,7.19055526923377,10.3746263939853,9.35963984295526,3.60369011810855,4.22719496655997,2.25415471346161,3.86937522906097,4.46090720485539,3.22624771495465,5.24863258131335,6.05201606716369,9.41992367048249,7.15703550746443,8.00422093135302,2.50267658574141,0.589676985339609,1.79889689907883,2.02860121388503,0.964708639009667,2.80088436959562,2.5892652370573,1.94562272130042,1.92192989231657,2.87536413054709,2.60498663367952,5.92871578917665,9.09283960609602,9.68746033018326,8.68398338454061,6.46636165583116,2.27389694124582,3.58522948172457,4.58311731593008,6.57132695207806,4.69017520837084,7.61739650835244,5.65887578787617,6.77831119656621,6.86540537911202,6.218735977642,5.24362607090362,4.83517949224508,5.49666422609744,10.5553898757491,8.15858525728064,5.90117127622843,8.27810238914197,9.47248480927973,7.73597131508541,2.45902418065013,6.31177318010932,5.36363973007636,6.63745865304285,7.10897212518236,5.73525115086125,4.90157082981267,7.92614286208731,4.04810701674894,6.42962887404886,7.90575555893047,10.9249247583414,7.66476460124651,6.05423052468668,4.39794790254655,5.93892442701128,3.98235415019888,3.8844901784797,2.11626489875326,3.77210159511796,5.02013217897314,2.45948118355142,2.84271122485043,4.72593848320757,2.13898427030833,2.21225730555071,6.32511651449993,7.21948802737308,10.2131881726136,3.06103859853227,6.20921682157222,3.64372959553707,5.49754724291048,3.56737635204141,3.45552943264454,1.8267896946876,5.39744928546534,4.44847348814022,2.42581237860458,10.7176064411962,4.68246837418126,6.1519183426719,7.5204576721976,8.20704498725306,9.03590593552537,9.82754100655701,3.07567585436135,3.09580301944834,2.59272338317596,1.50694765603753,2.32380187125743,2.0590035588587,2.20971958992012,3.07893195112048,2.3493995546752,15.2747298882418,3.00519193902079,4.26970880966382,3.99619761040665,4.80903080833278,5.8957892211468,4.31565908431426,5.2898211664215,5.23511883968059,6.48074866458964,8.07741107013003,0,3.13984746692355,2.81279433777066,3.30567020184881,3.35815541042101,4.39285926276023,5.51579021635044,3.3853140059427,3.46035836604846,1.20792060413003,1.15212002503146,3.16011120628178,2.63542779877213,4.82741498674688,2.20865399062252,2.68540043501222,2.78153896693771,1.9231271923195,2.06765338044408,3.83672509802961,2.74344503957999,2.92395936896837,1.55932609183604,2.40529604100824,3.62318396762864,6.57518112484113,4.43971906748129,1.97370484540847,2.18250001273302,7.72758376128762,7.13193406714492,8.24182309202693,6.64541975145104,3.51100472824754,8.471277639256,5.9842280745933,8.59343270159095,5.84300819968538,8.22099023724771,9.82012066606611,4.05013500139084,10.8077088773813,7.25027854374727,11.9084871702919,1.86817225651518,3.19219898720825,6.4878770186571,2.91728060481953,4.19226325255965,6.25067928730048,7.3341420174533,7.41726206060019,7.70206103020357,6.31743029409494,5.83002389747551,6.03604292435444,5.99305647807247,4.92993673517493,5.16919220600519,6.66811167796303,3.36064545240081,4.82273051159263,8.65380391686944,5.2991611248383,5.82877729055206,6.74408063405482,3.33810665926249,5.0871245821315,5.55245344450451,6.00763716030903,5.67076715905595,7.89209134313529,5.97538100921792,6.17256498823512,4.98267076121531,4.92522411877817,5.32000356120596,6.04253680625267,5.01557188550968,4.74640098082097,5.38042699424439,3.65280791882107,5.16478496585877,5.29419405886837,4.63735671240843
|short_description=p1@Neil1
}}

Revision as of 08:54, 5 August 2015

Short description:p1@Neil1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Neil1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098692_5end
EntrezGene:72774
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Neil1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H113.88
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G14.95
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C310.72
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H36.15
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C43.84
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B44.64





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure6.33e-1295
ectoderm6.33e-1295
presumptive ectoderm6.33e-1295
central nervous system1.05e-1073
nervous system1.46e-1075
adult organism1.58e-0851
ecto-epithelium1.46e-0773
brain2.83e-0747
future brain2.83e-0747
regional part of nervous system7.43e-0754
regional part of brain7.75e-0746
neural tube9.11e-0752
neural rod9.11e-0752
future spinal cord9.11e-0752
neural keel9.11e-0752
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