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FFCP PHASE1:Mm9::chr9:58087404..58087408,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3714|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:58087404..58087408,-|id=chr9:58087404..58087408,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,6.98e-07,6;CL:0000556,6.98e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.49e-17!193;UBERON:0004120!4.49e-17!193;UBERON:0006603!4.49e-17!193;UBERON:0003104!1.19e-15!131;UBERON:0009142!1.19e-15!131;UBERON:0000077!3.78e-13!97;UBERON:0001041!8.69e-13!92;UBERON:0004119!1.19e-10!130;UBERON:0000925!1.19e-10!130;UBERON:0006595!1.19e-10!130;UBERON:0001007!2.82e-10!128;UBERON:0001555!2.82e-10!128;UBERON:0007026!2.82e-10!128;UBERON:0004921!3.83e-10!126;UBERON:0004185!3.83e-10!126;UBERON:0001048!5.66e-10!147;UBERON:0000466!1.45e-09!79;UBERON:0005057!5.64e-09!51;UBERON:0009569!1.61e-08!66;UBERON:0002405!3.67e-08!70;UBERON:0005172!1.32e-07!49;UBERON:0005173!1.32e-07!49;UBERON:0002417!1.32e-07!49;UBERON:0000916!1.32e-07!49;UBERON:0005177!2.40e-07!85;UBERON:0002100!3.31e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.50e-12,80;UBERON:0004119,1.76e-10,118;UBERON:0000925,1.76e-10,118;UBERON:0006595,1.76e-10,118;UBERON:0001007,4.93e-10,116;UBERON:0001555,4.93e-10,116;UBERON:0007026,4.93e-10,116;UBERON:0004921,5.49e-10,114;UBERON:0002193,6.88e-10,48;UBERON:0002405,6.88e-10,48;UBERON:0002390,2.13e-09,45;UBERON:0003061,2.13e-09,45;UBERON:0002100,2.94e-09,90;UBERON:0000077,5.07e-09,35;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0005177,1.48e-08,79;UBERON:0005172,1.16e-07,49;UBERON:0005173,1.16e-07,49;UBERON:0002417,1.16e-07,49;UBERON:0000916,1.16e-07,49;UBERON:0003081,1.81e-07,87;UBERON:0009569,3.72e-07,66;UBERON:0000949,8.73e-07,72|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0,0,1.80772652818207,0.281577444303333,0,0.34243593645101,0.319088635981346,1.19840510951844,2.53519167015092,3.66420737997229,4.25198061518635,7.69518065940961,9.30613387806801,6.44437837946972,7.63901373236454,0.340173160604279,0.595745707205312,1.04479915655574,0.47997726838022,1.37645568640302,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0,1.57057123192139,0,0,0,2.7697299954627,1.11514624341466,2.75320128242522,0,0.218025156380447,0,0.388859798148567,0,0,2.34895648480831,2.90144856804538,1.68046899571232,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.529000920747499,5.50742528533188,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0,0.35333957451034,0,1.28326477414318,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.45673551887624,3.36619248741323,0.890652834388949,1.21439728736295,0.304465478312141,0.922461989024234,0.60289056221049,0.823120949949934,0.502666365318702,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,3.3126227769059,2.42437626567611,3.72783522436244,0.585561594023094,0.41889341362691,1.53274233125155,0.11981512450592,0,0,0,0.457500602818626,0,1.04294592115366,0.511430914660661,0,0.486723789203273,0.407357455401265,1.99051152976149,0.758168275301024,1.05220927943237,0.910843100738926,0.689706313300419,0,0.60281927134286,0.612328492361951,0.384341160854549,0.187403449119458,0.776110112217047,0.215567992932842,0.756424320671277,0.175951124163949,0.657587197282725,1.94633074457919,0,0.205782136407943,1.79130840136644,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.473489471170421,1.37734962223183,0.925602677324269,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,1.64167464079095,0.810688095458557,1.02339991197733,1.3173006917463,0.536825675041487,0,0.102904612379284,2.31293148088659,0.793351699990633,0.426576501070468,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.951128130562796,1.42358718463353,0.164698954724011,2.76468729680296,1.59165177632921,1.75467678407208,0,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.01825663922657,1.55161989734101,0.631222379012867,1.01178459398812,1.32849133181642,1.56998727841375,1.1105744752962,1.77871576252289,2.00214126859313,1.57247196090562,1.34917267430912,3.44862206360455,0.482354319504834,2.03700681425136,3.45235364940973,2.2698931748505,4.94210543738547,14.3768206527355,3.72140947668503,3.12037673114561,1.01031551178845,1.97337154874103,0.964887042726734,2.58654466233247,0.189491411770485,0.325929952884052,0.678980343100753,1.64283173801951,1.34005005953453,0.476087281772027,0.585400943573396,1.41871629695572,1.7717175171902,0.797273843287435,1.63863314715738,2.07221978239075,0.723245292907558,1.50791283939272,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.234423373184406,0,0.757412781613119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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=3714
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr9:58087404..58087408,-
|description=CAGE_peak_at_chr9:58087404..58087408,-
|id=chr9:58087404..58087408,-
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.50e-12,80;UBERON:0004119,1.76e-10,118;UBERON:0000925,1.76e-10,118;UBERON:0006595,1.76e-10,118;UBERON:0001007,4.93e-10,116;UBERON:0001555,4.93e-10,116;UBERON:0007026,4.93e-10,116;UBERON:0004921,5.49e-10,114;UBERON:0002193,6.88e-10,48;UBERON:0002405,6.88e-10,48;UBERON:0002390,2.13e-09,45;UBERON:0003061,2.13e-09,45;UBERON:0002100,2.94e-09,90;UBERON:0000077,5.07e-09,35;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0005177,1.48e-08,79;UBERON:0005172,1.16e-07,49;UBERON:0005173,1.16e-07,49;UBERON:0002417,1.16e-07,49;UBERON:0000916,1.16e-07,49;UBERON:0003081,1.81e-07,87;UBERON:0009569,3.72e-07,66;UBERON:0000949,8.73e-07,72
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0,0,1.80772652818207,0.281577444303333,0,0.34243593645101,0.319088635981346,1.19840510951844,2.53519167015092,3.66420737997229,4.25198061518635,7.69518065940961,9.30613387806801,6.44437837946972,7.63901373236454,0.340173160604279,0.595745707205312,1.04479915655574,0.47997726838022,1.37645568640302,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0,1.57057123192139,0,0,0,2.7697299954627,1.11514624341466,2.75320128242522,0,0.218025156380447,0,0.388859798148567,0,0,2.34895648480831,2.90144856804538,1.68046899571232,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.529000920747499,5.50742528533188,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0,0.35333957451034,0,1.28326477414318,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.45673551887624,3.36619248741323,0.890652834388949,1.21439728736295,0.304465478312141,0.922461989024234,0.60289056221049,0.823120949949934,0.502666365318702,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,3.3126227769059,2.42437626567611,3.72783522436244,0.585561594023094,0.41889341362691,1.53274233125155,0.11981512450592,0,0,0,0.457500602818626,0,1.04294592115366,0.511430914660661,0,0.486723789203273,0.407357455401265,1.99051152976149,0.758168275301024,1.05220927943237,0.910843100738926,0.689706313300419,0,0.60281927134286,0.612328492361951,0.384341160854549,0.187403449119458,0.776110112217047,0.215567992932842,0.756424320671277,0.175951124163949,0.657587197282725,1.94633074457919,0,0.205782136407943,1.79130840136644,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.473489471170421,1.37734962223183,0.925602677324269,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,1.64167464079095,0.810688095458557,1.02339991197733,1.3173006917463,0.536825675041487,0,0.102904612379284,2.31293148088659,0.793351699990633,0.426576501070468,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.951128130562796,1.42358718463353,0.164698954724011,2.76468729680296,1.59165177632921,1.75467678407208,0,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.01825663922657,1.55161989734101,0.631222379012867,1.01178459398812,1.32849133181642,1.56998727841375,1.1105744752962,1.77871576252289,2.00214126859313,1.57247196090562,1.34917267430912,3.44862206360455,0.482354319504834,2.03700681425136,3.45235364940973,2.2698931748505,4.94210543738547,14.3768206527355,3.72140947668503,3.12037673114561,1.01031551178845,1.97337154874103,0.964887042726734,2.58654466233247,0.189491411770485,0.325929952884052,0.678980343100753,1.64283173801951,1.34005005953453,0.476087281772027,0.585400943573396,1.41871629695572,1.7717175171902,0.797273843287435,1.63863314715738,2.07221978239075,0.723245292907558,1.50791283939272,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.234423373184406,0,0.757412781613119,1.89304931649754,0.390438744296638,0.861693590931196,0.716906393857656,0,0.283076530788832,1.21443210502468,0,0.395287777946524,0.642642632843614,0.99358059645788,0.890328018336276,0.162886959353576,0.329940245945071,0,1.69946445308487,1.51161778482376,1.88605079755898,1.18120757152309,0.307435147943927,1.55056975900933,4.72593848320757,0.712994756769443,0.948110273807448,3.16255825724996,1.03135543248187,0,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0,1.17335854031855,1.0591603543191,0.441056796109924,0.49465875882444,1.13025098687134,0.603129249281559,0.716234064018819,0.656563598980245,1.1659233465194,0,5.12612642393558,1.23832120777933,2.77791791054568,14.3160027323565,11.4823151285661,10.066239621087,0.169978429993855,0.279902904647316,0.690999869022119,0.954670618015114,0.158167996790568,0.813277868507395,0.432021363287205,1.04544148007234,0.87345025498471,1.07891477107857,1.07449492442937,1.57053565190418,1.42576470620972,5.59205381778233,0,1.04661582230785,0.66183396182839,0.972255941720238,0.774958940866387,1.68956125490778,0.821500670520278,1.17183946359555,0.734015410979976,0.724752362478018,0.288030006257865,3.47612232690996,1.01362607645082,0.616265742988964,1.94881234466693,1.43221356533985,1.19208812868759,1.32214994471966,2.06765338044408,3.63479219813331,2.13379058634,2.01652370273681,3.41102582589133,2.5977197242889,2.10378423926824,0.906921534460845,0,0.0897138566094757,0.335769232728157,0.579568782096571,1.68914227906064,0.915758121336325,1.50057865355346,1.00314420807073,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0.962757628775446,1.26348605881899,1.01391719956096,0.565879024158229,0.468207537349412,0.384150914429216,0.287177344778066,0.476293691283074,0.347652977834566,0.77163688185482,2.06042950401653,0.883193520806384,1.37147700954166,0.887379030796687,0.476872379894642,0.872078499793971,0.846984423737976,0.846146078916765,1.64635175585495,0.789209134313529,1.22223702461276,0.561142271657738,0.474540072496697,0.886540341380071,1.22769312950907,0.929621047115796,1.35034627686799,0.249810577937946,1.87145286756327,0.644613162144895,0.191288332068843,0.220591419119515,1.15933917810211
|short_description=p@chr9:58087404..58087408,-
}}

Latest revision as of 09:44, 5 August 2015

Short description:p@chr9:58087404..58087408, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:58087404..58087408, -
Coexpression cluster:MCL_coexpression_mm9:3714
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr9:58087404..58087408-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D114.32
spleen, neonate N20.CNhs11112.824-19H111.48
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
megakaryocyte progenitor cell6.98e-076
megakaryocyte6.98e-076

Uber anatomy
Ontology termp-valuen
foregut8.50e-1280
endoderm-derived structure1.76e-10118
endoderm1.76e-10118
presumptive endoderm1.76e-10118
digestive system4.93e-10116
digestive tract4.93e-10116
primitive gut4.93e-10116
subdivision of digestive tract5.49e-10114
hemolymphoid system6.88e-1048
immune system6.88e-1048
hematopoietic system2.13e-0945
blood island2.13e-0945
trunk2.94e-0990
mixed endoderm/mesoderm-derived structure5.07e-0935
hemopoietic organ1.34e-0829
immune organ1.34e-0829
trunk region element1.48e-0879
abdomen element1.16e-0749
abdominal segment element1.16e-0749
abdominal segment of trunk1.16e-0749
abdomen1.16e-0749
lateral plate mesoderm1.81e-0787
subdivision of trunk3.72e-0766
endocrine system8.73e-0772
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