FFCP PHASE1:Hg19::chr10:3930230..3930262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3930230..3930262,+ | |||
|coexpression_cluster_id=C151 | |coexpression_cluster_id=C151 | ||
|description=CAGE_peak_at_chr10:3930230..3930262,+ | |description=CAGE_peak_at_chr10:3930230..3930262,+ | ||
Latest revision as of 13:38, 23 July 2015
| Short description: | p@chr10:3930230..3930262, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr10:3930230..3930262, + |
| Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr10:3930230..3930262+ |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 4.40e-47 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.40e-47 | 42 |
| leukocyte | 3.46e-45 | 136 |
| myeloid leukocyte | 2.91e-42 | 72 |
| hematopoietic lineage restricted progenitor cell | 2.11e-41 | 120 |
| defensive cell | 1.55e-40 | 48 |
| phagocyte | 1.55e-40 | 48 |
| granulocyte monocyte progenitor cell | 4.08e-39 | 67 |
| hematopoietic oligopotent progenitor cell | 5.82e-37 | 161 |
| hematopoietic multipotent progenitor cell | 5.82e-37 | 161 |
Showing 1 to 10 of 43 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 8.00e-34 | 76 |
| immune system | 3.49e-31 | 93 |
| bone element | 6.21e-31 | 82 |
| skeletal element | 1.13e-27 | 90 |
| hematopoietic system | 4.56e-27 | 98 |
| blood island | 4.56e-27 | 98 |
| hemolymphoid system | 5.38e-26 | 108 |
| skeletal system | 2.51e-24 | 100 |
| musculoskeletal system | 3.20e-12 | 167 |
| lateral plate mesoderm | 5.99e-12 | 203 |
Showing 1 to 10 of 11 entries
