FFCP PHASE1:Hg19::chr17:8868385..8868412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8868385..8868412,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr17:8868385..8868412,+ | |description=CAGE_peak_at_chr17:8868385..8868412,+ | ||
Latest revision as of 23:27, 25 July 2015
| Short description: | p@chr17:8868385..8868412, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr17:8868385..8868412, + |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr17:8868385..8868412+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 2.77e-101 | 136 |
| myeloid leukocyte | 2.23e-99 | 72 |
| granulocyte monocyte progenitor cell | 3.00e-89 | 67 |
| macrophage dendritic cell progenitor | 1.86e-87 | 61 |
| monopoietic cell | 6.67e-84 | 59 |
| monocyte | 6.67e-84 | 59 |
| monoblast | 6.67e-84 | 59 |
| promonocyte | 6.67e-84 | 59 |
| defensive cell | 6.57e-83 | 48 |
| phagocyte | 6.57e-83 | 48 |
Showing 1 to 10 of 40 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 9.43e-95 | 98 |
| blood island | 9.43e-95 | 98 |
| hemolymphoid system | 6.30e-84 | 108 |
| bone marrow | 4.02e-79 | 76 |
| bone element | 5.80e-72 | 82 |
| immune system | 7.08e-70 | 93 |
| skeletal element | 6.77e-64 | 90 |
| skeletal system | 1.27e-55 | 100 |
| lateral plate mesoderm | 3.03e-34 | 203 |
| musculoskeletal system | 7.17e-26 | 167 |
Showing 1 to 10 of 17 entries
