FFCP PHASE1:Hg19::chr22:23412608..23412640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2781 | |EntrezGene=entrezgene:2781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4395 | |HGNC=HGNC:4395 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P19086,Q8IY73,Q8N652 | |UniProt=uniprot:P19086,uniprot:Q8IY73,uniprot:Q8N652 | ||
|association_with_transcript=-28bp_to_NM_002073,uc002zwu.1_5end | |association_with_transcript=-28bp_to_NM_002073,uc002zwu.1_5end | ||
|cluster_id=chr22:23412608..23412640,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_GNAZ_5end | |description=CAGE_peak_4_at_GNAZ_5end | ||
Revision as of 19:27, 28 July 2015
| Short description: | p4@GNAZ |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_GNAZ_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | -28bp_to_NM_002073, uc002zwu.1_5end |
| EntrezGene: | 2781 |
| HGNC: | 4395 |
| UniProt: | P19086Q8IY73Q8N652 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@GNAZ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.55e-87 | 56 |
| neural rod | 1.55e-87 | 56 |
| future spinal cord | 1.55e-87 | 56 |
| neural keel | 1.55e-87 | 56 |
| regional part of nervous system | 8.57e-83 | 53 |
| regional part of brain | 8.57e-83 | 53 |
| brain | 1.38e-69 | 68 |
| future brain | 1.38e-69 | 68 |
| regional part of forebrain | 2.31e-68 | 41 |
| forebrain | 2.31e-68 | 41 |
Showing 1 to 10 of 83 entries
