CL:0002328: Difference between revisions
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|located_in= | |located_in= | ||
|name=bronchial epithelial cell | |name=bronchial epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-20T02:00:00Z | |obo_creation_date=2010-09-20T02:00:00Z | ||
|part_of=UBERON:0002185;;UBERON:0002031;;UBERON:0002185 | |part_of=UBERON:0002185;;UBERON:0002031;;UBERON:0002185 | ||
Latest revision as of 16:42, 12 September 2014
| Name: | bronchial epithelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelial cell of the bronchus." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-09-20T02:00:00Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002202(epithelial cell of tracheobronchial tree) |
|---|---|
| part_of: | UBERON:0002185(bronchus),UBERON:0002031(epithelium of bronchus),UBERON:0002185(bronchus) |
Children
| derives from: | FF:0000015 (human bronchial epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
- 11457-119A8 (Bronchial Epithelial Cell, donor5)
- 11461-119B3 (Bronchial Epithelial Cell, donor6)
- 11511-119G8 (Bronchial Epithelial Cell, donor1)
- 11591-120G7 (Bronchial Epithelial Cell, donor2)
- 11672-122G7 (Bronchial Epithelial Cell, donor3)
- 11769-123I5 (Bronchial Epithelial Cell, donor7)
Mouse (Mus musculus)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
- 11457-119A8 (Bronchial Epithelial Cell, donor5)
- 11461-119B3 (Bronchial Epithelial Cell, donor6)
- 11511-119G8 (Bronchial Epithelial Cell, donor1)
- 11591-120G7 (Bronchial Epithelial Cell, donor2)
- 11672-122G7 (Bronchial Epithelial Cell, donor3)
- 11769-123I5 (Bronchial Epithelial Cell, donor7)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002328 (bronchial epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.71e-84 | FFCP PHASE1:Hg19::chr3:189632708..189632721,-#_eb3c817e205f541ecddd1be51ebfda74 | p@chr3:189632708..189632721, - |
| 1.71e-84 | FFCP PHASE2:Hg19::chr3:189632708..189632721,-#_eb3c817e205f541ecddd1be51ebfda74 | p@chr3:189632708..189632721, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:209823455..209823467,-#_49a19343f84b352a084b12c15900a918 | p@chr1:209823455..209823467, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:209823455..209823467,-#_49a19343f84b352a084b12c15900a918 | p@chr1:209823455..209823467, - |
| 3.13e-50 | FFCP PHASE1:Hg19::chr1:95088552..95088567,+#_88240a5a932981430f570016764efdfe | p@chr1:95088552..95088567, + |
| 3.13e-50 | FFCP PHASE2:Hg19::chr1:95088552..95088567,+#_88240a5a932981430f570016764efdfe | p@chr1:95088552..95088567, + |
| 1.03e-46 | FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_0f95d89ad6a198e96c810c69afa1a987 | p@chr1:3591362..3591369, - |
| 1.03e-46 | FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_0f95d89ad6a198e96c810c69afa1a987 | p@chr1:3591362..3591369, - |
| 5.0e-45 | FFCP PHASE1:Hg19::chr2:113830230..113830233,-#_8acd328588949d337dff5615360b173f | p@chr2:113830230..113830233, - |
| 5.0e-45 | FFCP PHASE2:Hg19::chr2:113830230..113830233,-#_8acd328588949d337dff5615360b173f | p@chr2:113830230..113830233, - |
| 1.92e-43 | FFCP PHASE2:Hg19::chr10:73679250..73679255,-#_4e18694a4732959a689704d624cf0100 | p@chr10:73679250..73679255, - |
| 1.92e-43 | FFCP PHASE1:Hg19::chr10:73679250..73679255,-#_4e18694a4732959a689704d624cf0100 | p@chr10:73679250..73679255, - |
| 7.6e-41 | FFCP PHASE1:Hg19::chr1:9953308..9953320,-#_80f5456b19fb5682beb9e61a917d1b0d | p9@CTNNBIP1 |
| 7.6e-41 | FFCP PHASE2:Hg19::chr1:9953308..9953320,-#_80f5456b19fb5682beb9e61a917d1b0d | p9@CTNNBIP1 |
| 1.49e-38 | FFCP PHASE2:Hg19::chr17:48611912..48611919,+#_60cd078b9e9cb346d83c4ff3b5cd1c67 | p7@EPN3 |
| 1.49e-38 | FFCP PHASE1:Hg19::chr17:48611912..48611919,+#_60cd078b9e9cb346d83c4ff3b5cd1c67 | p7@EPN3 |
| 1.62e-38 | FFCP PHASE1:Hg19::chr1:95089255..95089279,-#_9d76269490fc9f381f4bbabce84a8376 | p1@ENST00000435559 |
| 1.62e-38 | FFCP PHASE2:Hg19::chr1:95089255..95089279,-#_9d76269490fc9f381f4bbabce84a8376 | p1@ENST00000435559 |
| 1.8e-38 | FFCP PHASE1:Hg19::chr7:135018332..135018336,+#_fe6c1d4f03bd513cf570c1875fe66baa | p@chr7:135018332..135018336, + |
| 1.8e-38 | FFCP PHASE2:Hg19::chr7:135018332..135018336,+#_fe6c1d4f03bd513cf570c1875fe66baa | p@chr7:135018332..135018336, + |
| 3.06e-38 | FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_1876820d889b2c1d226b59a1f79d408a | p5@EPN3 |
| 3.06e-38 | FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_1876820d889b2c1d226b59a1f79d408a | p5@EPN3 |
| 5.76e-38 | FFCP PHASE1:Hg19::chr2:74211227..74211238,+#_cf74e669e7b417c7eb8149cbef2d063c | p@chr2:74211227..74211238, + |
| 5.76e-38 | FFCP PHASE2:Hg19::chr2:74211227..74211238,+#_cf74e669e7b417c7eb8149cbef2d063c | p@chr2:74211227..74211238, + |
| 2.35e-36 | FFCP PHASE1:Hg19::chr17:38179639..38179652,-#_8111d87537b249ef3545b6b284464eee | p7@MED24 |
| 2.35e-36 | FFCP PHASE2:Hg19::chr17:38179639..38179652,-#_8111d87537b249ef3545b6b284464eee | p7@MED24 |
| 2.53e-35 | FFCP PHASE2:Hg19::chr20:14248741..14248745,-#_0fef736430573186ab04f61e1b59bb11 | p@chr20:14248741..14248745, - |
| 2.53e-35 | FFCP PHASE1:Hg19::chr20:14248741..14248745,-#_0fef736430573186ab04f61e1b59bb11 | p@chr20:14248741..14248745, - |
| 1.96e-34 | FFCP PHASE1:Hg19::chr17:38652393..38652403,-#_af2650c81f80590e9d64a263f9d10f16 | p16@TNS4 |
| 1.96e-34 | FFCP PHASE2:Hg19::chr17:38652393..38652403,-#_af2650c81f80590e9d64a263f9d10f16 | p16@TNS4 |
| 2.75e-34 | FFCP PHASE1:Hg19::chr1:153540420..153540455,+#_2e0f6124136adb3b0d5d3e794570fb36 | p@chr1:153540420..153540455, + |
| 2.75e-34 | FFCP PHASE2:Hg19::chr1:153540420..153540455,+#_2e0f6124136adb3b0d5d3e794570fb36 | p@chr1:153540420..153540455, + |
| 3.07e-34 | FFCP PHASE1:Hg19::chr12:52844247..52844256,-#_283f876d1fd80790651cb9636be724fb | p@chr12:52844247..52844256, - |
| 3.07e-34 | FFCP PHASE2:Hg19::chr12:52844247..52844256,-#_283f876d1fd80790651cb9636be724fb | p@chr12:52844247..52844256, - |
| 5.51e-34 | FFCP PHASE2:Hg19::chr11:94427497..94427507,-#_8a0f5d6bbf21e42aab755b7d70007b5f | p@chr11:94427497..94427507, - |
| 5.51e-34 | FFCP PHASE1:Hg19::chr11:94427497..94427507,-#_8a0f5d6bbf21e42aab755b7d70007b5f | p@chr11:94427497..94427507, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:27181551..27181558,-#_2f0b6e72a3c47ecb448cf5c222e57d23 | p@chr1:27181551..27181558, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:27181551..27181558,-#_2f0b6e72a3c47ecb448cf5c222e57d23 | p@chr1:27181551..27181558, - |
| 6.76e-34 | FFCP PHASE2:Hg19::chr1:183133608..183133625,-#_0435743b566e6b48134dfb9cda466446 | p@chr1:183133608..183133625, - |
| 6.76e-34 | FFCP PHASE1:Hg19::chr1:183133608..183133625,-#_0435743b566e6b48134dfb9cda466446 | p@chr1:183133608..183133625, - |
| 1.27e-33 | FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_6700c5ef9ac5351e330f3c69d2bdc1af | p@chr3:190252374..190252383, - |
| 1.27e-33 | FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_6700c5ef9ac5351e330f3c69d2bdc1af | p@chr3:190252374..190252383, - |
| 1.5e-33 | FFCP PHASE1:Hg19::chr8:29414184..29414190,+#_1012365246fe964a19ee383e47fc1fa5 | p@chr8:29414184..29414190, + |
| 1.5e-33 | FFCP PHASE2:Hg19::chr8:29414184..29414190,+#_1012365246fe964a19ee383e47fc1fa5 | p@chr8:29414184..29414190, + |
| 6.66e-33 | FFCP PHASE1:Hg19::chr14:67879076..67879080,+#_38497152605170c6ed9e9ba7e29e3df1 | p@chr14:67879076..67879080, + |
| 6.66e-33 | FFCP PHASE2:Hg19::chr14:67879076..67879080,+#_38497152605170c6ed9e9ba7e29e3df1 | p@chr14:67879076..67879080, + |
| 1.14e-32 | FFCP PHASE2:Hg19::chr1:209807970..209807983,-#_d3f2bf577870b54d66b8ccc9dec85679 | p@chr1:209807970..209807983, - |
| 1.14e-32 | FFCP PHASE1:Hg19::chr1:209807970..209807983,-#_d3f2bf577870b54d66b8ccc9dec85679 | p@chr1:209807970..209807983, - |
| 2.68e-32 | FFCP PHASE1:Hg19::chr6:83075367..83075383,-#_beb3027275771f9b781a985471764b6c | p@chr6:83075367..83075383, - |
| 2.68e-32 | FFCP PHASE2:Hg19::chr6:83075367..83075383,-#_beb3027275771f9b781a985471764b6c | p@chr6:83075367..83075383, - |
| 2.95e-31 | FFCP PHASE2:Hg19::chr4:15937715..15937733,-#_770332d35bf427b1a09be54d89e3633f | p@chr4:15937715..15937733, - |
| 2.95e-31 | FFCP PHASE1:Hg19::chr4:15937715..15937733,-#_770332d35bf427b1a09be54d89e3633f | p@chr4:15937715..15937733, - |
| 6.66e-31 | FFCP PHASE1:Hg19::chr9:26747081..26747110,+#_a67d8cdb9671a45fa1b24f763de88a26 | p@chr9:26747081..26747110, + |
| 6.66e-31 | FFCP PHASE2:Hg19::chr9:26747081..26747110,+#_a67d8cdb9671a45fa1b24f763de88a26 | p@chr9:26747081..26747110, + |
| 1.0e-30 | FFCP PHASE2:Hg19::chr11:120008883..120008884,-#_310cab57e0890fa6ea5d1a51c9f7f956 | p16@TRIM29 |
| 1.0e-30 | FFCP PHASE1:Hg19::chr11:120008883..120008884,-#_310cab57e0890fa6ea5d1a51c9f7f956 | p16@TRIM29 |
| 1.09e-30 | FFCP PHASE1:Hg19::chr13:61507880..61507904,-#_960b0008675d59007862f3d4048a43e4 | p@chr13:61507880..61507904, - |
| 1.09e-30 | FFCP PHASE2:Hg19::chr13:61507880..61507904,-#_960b0008675d59007862f3d4048a43e4 | p@chr13:61507880..61507904, - |
| 1.47e-30 | FFCP PHASE1:Hg19::chr1:152475755..152475761,+#_1ac2dd722d54334dba2b76209eafb9c6 | p@chr1:152475755..152475761, + |
| 1.47e-30 | FFCP PHASE2:Hg19::chr1:152475755..152475761,+#_1ac2dd722d54334dba2b76209eafb9c6 | p@chr1:152475755..152475761, + |
| 1.66e-30 | FFCP PHASE2:Hg19::chr17:39777017..39777027,+#_c41e21ae0cb35c7650a23948467cd7a5 | p@chr17:39777017..39777027, + |
| 1.66e-30 | FFCP PHASE1:Hg19::chr17:39777017..39777027,+#_c41e21ae0cb35c7650a23948467cd7a5 | p@chr17:39777017..39777027, + |
| 1.71e-30 | FFCP PHASE2:Hg19::chr4:82554167..82554171,+#_a3d5da3c50a02d50a612dc119b74cd79 | p@chr4:82554167..82554171, + |
| 1.71e-30 | FFCP PHASE1:Hg19::chr4:82554167..82554171,+#_a3d5da3c50a02d50a612dc119b74cd79 | p@chr4:82554167..82554171, + |
| 2.24e-30 | FFCP PHASE1:Hg19::chr1:209825932..209825936,-#_65a48061e3570d76a7ba6febb70af5b7 | p10@LAMB3 |
| 2.24e-30 | FFCP PHASE2:Hg19::chr1:209825932..209825936,-#_65a48061e3570d76a7ba6febb70af5b7 | p10@LAMB3 |
| 3.1e-30 | FFCP PHASE2:Hg19::chr15:76443020..76443024,-#_2e9fd6c12bc04a75ddcf1a4fd8d69c1f | p@chr15:76443020..76443024, - |
| 3.1e-30 | FFCP PHASE1:Hg19::chr15:76443020..76443024,-#_2e9fd6c12bc04a75ddcf1a4fd8d69c1f | p@chr15:76443020..76443024, - |
| 3.11e-30 | FFCP PHASE2:Hg19::chr17:39780624..39780631,-#_173f8063e13f5b5099c50fd6a406340e | p8@KRT17 |
| 3.11e-30 | FFCP PHASE1:Hg19::chr17:39780624..39780631,-#_173f8063e13f5b5099c50fd6a406340e | p8@KRT17 |
| 5.61e-30 | FFCP PHASE1:Hg19::chr1:156720278..156720286,+#_a089033a7528600b67dbd207b05c3dca | p15@PRCC |
| 5.61e-30 | FFCP PHASE2:Hg19::chr1:156720278..156720286,+#_a089033a7528600b67dbd207b05c3dca | p15@PRCC |
| 8.74e-30 | FFCP PHASE2:Hg19::chr14:94426721..94426726,+#_d31235bc9f84b3bf16521c7b34b0060c | p@chr14:94426721..94426726, + |
| 8.74e-30 | FFCP PHASE1:Hg19::chr14:94426721..94426726,+#_d31235bc9f84b3bf16521c7b34b0060c | p@chr14:94426721..94426726, + |
| 1.34e-29 | FFCP PHASE1:Hg19::chr12:52913881..52913889,+#_1605bec29578398b26b64950b3cc8f91 | p@chr12:52913881..52913889, + |
| 1.34e-29 | FFCP PHASE2:Hg19::chr12:52913881..52913889,+#_1605bec29578398b26b64950b3cc8f91 | p@chr12:52913881..52913889, + |
| 1.63e-29 | FFCP PHASE2:Hg19::chr17:73719483..73719489,-#_cdedde224bb125d281a60f6613988cb0 | p@chr17:73719483..73719489, - |
| 1.63e-29 | FFCP PHASE1:Hg19::chr17:73719483..73719489,-#_cdedde224bb125d281a60f6613988cb0 | p@chr17:73719483..73719489, - |
| 1.98e-29 | FFCP PHASE1:Hg19::chr1:209827520..209827532,-#_56e90caad0dffcf083ed180949c9af13 | p@chr1:209827520..209827532, - |
| 1.98e-29 | FFCP PHASE2:Hg19::chr1:209827520..209827532,-#_56e90caad0dffcf083ed180949c9af13 | p@chr1:209827520..209827532, - |
| 2.64e-29 | FFCP PHASE1:Hg19::chr12:56332022..56332030,+#_b1a9269b4aa13371632972975bda477b | p17@DGKA |
| 2.64e-29 | FFCP PHASE2:Hg19::chr12:56332022..56332030,+#_b1a9269b4aa13371632972975bda477b | p17@DGKA |
| 3.27e-28 | FFCP PHASE2:Hg19::chr17:38657781..38657786,-#_cbfc511961928672f822060464206986 | p15@TNS4 |
| 3.27e-28 | FFCP PHASE1:Hg19::chr17:38657781..38657786,-#_cbfc511961928672f822060464206986 | p15@TNS4 |
| 4.32e-28 | FFCP PHASE1:Hg19::chr1:55436540..55436544,-#_86887e2086e77b3d7fa53d8c28a6e989 | p@chr1:55436540..55436544, - |
| 4.32e-28 | FFCP PHASE2:Hg19::chr1:55436540..55436544,-#_86887e2086e77b3d7fa53d8c28a6e989 | p@chr1:55436540..55436544, - |
| 6.24e-28 | FFCP PHASE2:Hg19::chr1:153534013..153534025,+#_383b70c9736d9cf82abc1d881b90e6dd | p@chr1:153534013..153534025, + |
| 6.24e-28 | FFCP PHASE1:Hg19::chr1:153534013..153534025,+#_383b70c9736d9cf82abc1d881b90e6dd | p@chr1:153534013..153534025, + |
| 8.22e-28 | FFCP PHASE2:Hg19::chr17:39768786..39768828,-#_d67a7873312be58f5f48631a14d29444 | p2@KRT16 |
| 8.22e-28 | FFCP PHASE1:Hg19::chr17:39768786..39768828,-#_d67a7873312be58f5f48631a14d29444 | p2@KRT16 |
| 1.22e-27 | FFCP PHASE2:Hg19::chr2:70581573..70581577,-#_3e04243906b51b2b31acef595e71d1aa | p@chr2:70581573..70581577, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr1:153587360..153587377,-#_3e04243906b51b2b31acef595e71d1aa | p@chr1:153587360..153587377, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr1:44446555..44446566,+#_3e04243906b51b2b31acef595e71d1aa | p16@B4GALT2 |
| 1.22e-27 | FFCP PHASE1:Hg19::chr19:48101913..48101916,-#_3e04243906b51b2b31acef595e71d1aa | p@chr19:48101913..48101916, - |
| 1.22e-27 | FFCP PHASE2:Hg19::chr1:153587360..153587377,-#_3e04243906b51b2b31acef595e71d1aa | p@chr1:153587360..153587377, - |
| 1.22e-27 | FFCP PHASE2:Hg19::chr1:44446555..44446566,+#_3e04243906b51b2b31acef595e71d1aa | p16@B4GALT2 |
| 1.22e-27 | FFCP PHASE2:Hg19::chr19:48101913..48101916,-#_3e04243906b51b2b31acef595e71d1aa | p@chr19:48101913..48101916, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr2:70581573..70581577,-#_3e04243906b51b2b31acef595e71d1aa | p@chr2:70581573..70581577, - |
| 1.39e-27 | FFCP PHASE1:Hg19::chr2:20402306..20402318,-#_88c8d6ed3538922644522755878b36e8 | p@chr2:20402306..20402318, - |
| 1.39e-27 | FFCP PHASE1:Hg19::chr1:46647115..46647118,-#_88c8d6ed3538922644522755878b36e8 | p@chr1:46647115..46647118, - |
