UBERON:0000076: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=external ectoderm | |name=external ectoderm | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0000924 | |part_of=UBERON:0000922;;UBERON:0000924 | ||
Latest revision as of 17:05, 12 September 2014
| Name: | external ectoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The surface ectoderm (or external ectoderm forms the following structures: Skin Epithelium of the mouth and nasal cavity saliavary glands, and glands of mouth and nasal cavity Enamel - as a side note dentin and dental pulp are formed from ectomesenchyme which is derived from ectoderm Epithelium of pineal and pituitary glands Lens and cornea of the eye Apical ectodermal ridge inducing development of the limb buds of the embryo. Sensory receptors in epidermis [WP,unvetted]." [Wikipedia:External_ectoderm] | ||
| Xrefs: |
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| Synonyms: | "surface ectoderm" EXACT [] | ||
| Comments: | Editor note: merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube). |
200px-Ectoderm.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000490(unilaminar epithelium),UBERON:0005291(embryonic tissue) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0000924(ectoderm) |
Children
| develops from: | UBERON:0001811 (conjunctiva),UBERON:0007383 (enveloping layer of ectoderm),UBERON:0011272 (embryonic skin basal layer) |
|---|---|
| part of: | UBERON:0003050 (olfactory placode),UBERON:0005333 (mammary bud) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000076 (external ectoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88207188..88207211,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88207188..88207211, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:164568599..164568608,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p8@Wfdc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:32247461..32247472,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr14:32247461..32247472, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:6537248..6537263,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p3@Wap |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:6537234..6537253,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:6537234..6537253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88123692..88123697,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123692..88123697, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88103244..88103281,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88103244..88103281, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103393725..103393729,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393725..103393729, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88206460..88206469,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88206460..88206469, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88098006..88098035,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88098006..88098035, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88123692..88123697,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123692..88123697, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:8768872..8768876,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr12:8768872..8768876, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:98312614..98312624,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:98312614..98312624, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103393393..103393402,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393393..103393402, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:94221876..94221878,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr3:94221876..94221878, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85620623..85620633,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:85620623..85620633, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:93360875..93360880,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr2:93360875..93360880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:24162312..24162345,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr6:24162312..24162345, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88217757..88217772,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88217757..88217772, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88123526..88123536,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123526..88123536, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:77686674..77686686,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:77686674..77686686, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88098560..88098587,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88098560..88098587, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:118640697..118640705,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr4:118640697..118640705, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:100283528..100283529,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr10:100283528..100283529, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88358988..88358999,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88358988..88358999, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:98629001..98629006,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr8:98629001..98629006, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88215676..88215679,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88215676..88215679, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103393267..103393277,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393267..103393277, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:118641223..118641237,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr4:118641223..118641237, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88356056..88356074,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88356056..88356074, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88123555..88123565,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123555..88123565, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:45501817..45501821,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr12:45501817..45501821, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103393256..103393264,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393256..103393264, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:32247461..32247472,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr14:32247461..32247472, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:60519767..60519772,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:60519767..60519772, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88215650..88215658,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88215650..88215658, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88109913..88109924,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88109913..88109924, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:98313162..98313173,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p2@Lalba |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:29447361..29447364,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:29447361..29447364, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88358854..88358874,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88358854..88358874, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:56109584..56109587,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p1@uc008hyp.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88213564..88213565,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88213564..88213565, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:28418029..28418047,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr2:28418029..28418047, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:40637157..40637179,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p3@Slc9a4 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:109975213..109975217,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr2:109975213..109975217, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:111655159..111655168,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr13:111655159..111655168, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:118636782..118636786,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr4:118636782..118636786, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:112544745..112544756,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr7:112544745..112544756, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88217642..88217646,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88217642..88217646, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88111209..88111249,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88111209..88111249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:77686674..77686686,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:77686674..77686686, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88210863..88210879,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88210863..88210879, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88106054..88106056,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88106054..88106056, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:134688699..134688701,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr2:134688699..134688701, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:53708625..53708630,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr12:53708625..53708630, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:55158428..55158429,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:55158428..55158429, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:73491357..73491360,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:73491357..73491360, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:53658339..53658343,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr18:53658339..53658343, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88209161..88209183,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88209161..88209183, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88123745..88123777,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123745..88123777, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:118627429..118627443,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p1@ENSMUST00000155069, p1@uc008ulc.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109210996..109211006,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr7:109210996..109211006, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:52461156..52461158,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr8:52461156..52461158, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88106878..88106881,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88106878..88106881, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:158813399..158813404,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chrX:158813399..158813404, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:112544693..112544699,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr7:112544693..112544699, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88209047..88209050,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88209047..88209050, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88100053..88100078,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88100053..88100078, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:100283528..100283529,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr10:100283528..100283529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88358934..88358941,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88358934..88358941, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88123745..88123777,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123745..88123777, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:111655159..111655168,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr13:111655159..111655168, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:109658690..109658694,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:109658690..109658694, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:48162734..48162736,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:48162734..48162736, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103393764..103393775,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393764..103393775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:24319811..24319816,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p12@Rheb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:116740698..116740723,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr4:116740698..116740723, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:6535571..6535575,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:6535571..6535575, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:68417059..68417064,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:68417059..68417064, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88123612..88123619,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123612..88123619, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88102247..88102287,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88102247..88102287, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81785997..81786001,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr18:81785997..81786001, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88361470..88361479,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88361470..88361479, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:46245998..46245999,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr10:46245998..46245999, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:101613203..101613206,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr2:101613203..101613206, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103393393..103393402,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393393..103393402, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88204809..88204827,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88204809..88204827, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88096251..88096262,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88096251..88096262, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88123612..88123619,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88123612..88123619, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103393352..103393360,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:103393352..103393360, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88217569..88217586,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88217569..88217586, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:88121763..88121767,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88121763..88121767, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88204836..88204843,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88204836..88204843, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:6535581..6535586,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr11:6535581..6535586, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:68417059..68417064,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr9:68417059..68417064, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:88097350..88097355,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr5:88097350..88097355, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:118636825..118636828,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr4:118636825..118636828, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:6733731..6733747,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr18:6733731..6733747, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:6733891..6733896,+#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr18:6733891..6733896, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85620623..85620633,-#_a8d6f04d47925873fcf5aa896dd73fd1 | p@chr15:85620623..85620633, - |
