UBERON:0001032: Difference between revisions
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|located_in= | |located_in= | ||
|name=sensory system | |name=sensory system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004456 | |part_of=UBERON:0004456 | ||
Latest revision as of 17:15, 12 September 2014
| Name: | sensory system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information." [Wikipedia:Sensory_system] | ||
| Xrefs: |
| ||
| Synonyms: |
"organa sensuum" EXACT [FMA:75259, FMA:TA] "organa sensuum" RELATED LATIN [Wikipedia:Sensory_system] "sense organ subsystem" EXACT [] "sense organs" EXACT [FMA:75259] "sense organs set" EXACT [FMA:75259] "sensory organ system" RELATED [] "sensory subsystem" EXACT [] | ||
| Comments: | note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs | ||
| Alt_id: | UBERON:FBbt_00005155-FMA_78499-MA_0002442-MIAA_0000031-WBbt_0005832-ZFA_0000282 | ||
| Subset: |
uberon_slim vertebrate_core |
Gray722.png]
200px-Gray722.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system) |
|---|---|
| part_of: | UBERON:0004456(entire sense organ system) |
Children
| is a: | UBERON:0002104 (visual system),UBERON:0002105 (vestibulo-auditory system),UBERON:0004681 (vestibular system),UBERON:0007037 (mechanosensory system) |
|---|---|
| part of: | UBERON:0000020 (sense organ) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001032 (sensory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.42e-69 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_3b73b4f8018d6a36703b85844c99093c | p10@SIX3 |
| 4.42e-69 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_3b73b4f8018d6a36703b85844c99093c | p10@SIX3 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr3:129525389..129525400, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31815126..31815139, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:5876195..5876219, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31818106..31818119, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr3:129525389..129525400, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:5876195..5876219, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31817987..31818013, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31818263..31818276, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_97e51647b1d00007bf06ff9fc1727a78 | p3@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_97e51647b1d00007bf06ff9fc1727a78 | p4@Dct |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:77532391..77532408, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_97e51647b1d00007bf06ff9fc1727a78 | p4@Dct |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31817987..31818013, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_97e51647b1d00007bf06ff9fc1727a78 | p1@Mir184 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_97e51647b1d00007bf06ff9fc1727a78 | p8@Osbp2 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_97e51647b1d00007bf06ff9fc1727a78 | p6@Celf1 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_97e51647b1d00007bf06ff9fc1727a78 | p6@Celf1 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr10:127668442..127668453, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:77532391..77532408, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31818106..31818119, + |
| 5.33e-65 | FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr10:127668442..127668453, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_97e51647b1d00007bf06ff9fc1727a78 | p5@Zfp365 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_97e51647b1d00007bf06ff9fc1727a78 | p3@Osbp2 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_97e51647b1d00007bf06ff9fc1727a78 | p1@E130218I03Rik |
| 5.33e-65 | FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31818263..31818276, + |
| 5.33e-65 | FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:77532283..77532316, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr16:21743134..21743139, - |
| 5.33e-65 | FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_97e51647b1d00007bf06ff9fc1727a78 | p1@E130218I03Rik |
| 5.33e-65 | FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr17:31815126..31815139, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_97e51647b1d00007bf06ff9fc1727a78 | p5@Zfp365 |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr11:77532283..77532316, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_97e51647b1d00007bf06ff9fc1727a78 | p1@Mir184 |
| 5.33e-65 | FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_97e51647b1d00007bf06ff9fc1727a78 | p@chr16:21743134..21743139, - |
| 5.33e-65 | FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_97e51647b1d00007bf06ff9fc1727a78 | p8@Osbp2 |
| 7.33e-60 | FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_212520ff4cb3ac8d40e59db0cf10ee56 | p1@ENST00000456467 |
| 7.33e-60 | FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_212520ff4cb3ac8d40e59db0cf10ee56 | p1@ENST00000456467 |
| 9.27e-59 | FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_ce0ab76f58c6f217616330f553a5c963 | p3@LOC100504989, p3@Timeless |
| 9.27e-59 | FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_ce0ab76f58c6f217616330f553a5c963 | p3@LOC100504989, p3@Timeless |
| 9.27e-59 | FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_ce0ab76f58c6f217616330f553a5c963 | p@chr7:64675015..64675028, + |
| 9.27e-59 | FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_ce0ab76f58c6f217616330f553a5c963 | p@chr7:64675015..64675028, + |
| 1.08e-58 | FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_18a512c190c6343dd2d10275682fd728 | p6@Pax6 |
| 1.08e-58 | FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_18a512c190c6343dd2d10275682fd728 | p@chr6:97891135..97891147, + |
| 1.08e-58 | FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_18a512c190c6343dd2d10275682fd728 | p@chr6:97891135..97891147, + |
| 1.08e-58 | FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_18a512c190c6343dd2d10275682fd728 | p6@Pax6 |
| 1.26e-58 | FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_f00fc8a26e1754941350d2d099f16576 | p1@4933429O19Rik |
| 1.26e-58 | FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_f00fc8a26e1754941350d2d099f16576 | p1@4933429O19Rik |
| 3.92e-58 | FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_ad99e93396624e3b61fe12f3f07c19bc | p1@ENST00000448923 |
| 3.92e-58 | FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_ad99e93396624e3b61fe12f3f07c19bc | p1@ENST00000448923 |
| 5.97e-58 | FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_1d1fa5faf44104bed8628913bb632600 | p11@SIX3 |
| 5.97e-58 | FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_1d1fa5faf44104bed8628913bb632600 | p11@SIX3 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:113506006..113506025, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112675556..112675574, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_f83c0bbd928b8e47475feadb917216fa | p2@Cryga |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112696408..112696421,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112696408..112696421, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_f83c0bbd928b8e47475feadb917216fa | p11@Rnf123 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_f83c0bbd928b8e47475feadb917216fa | p2@Hsd17b12 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112690963..112690994,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690963..112690994, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:113504891..113504916,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:113504891..113504916, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:38092602..38092616,+#_f83c0bbd928b8e47475feadb917216fa | p@chr1:38092602..38092616, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_f83c0bbd928b8e47475feadb917216fa | p@chr1:38092538..38092550, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:113506190..113506202, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr11:95705150..95705170,+#_f83c0bbd928b8e47475feadb917216fa | p3@Gngt2 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112675556..112675574,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112675556..112675574, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr11:95705150..95705170,+#_f83c0bbd928b8e47475feadb917216fa | p3@Gngt2 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_f83c0bbd928b8e47475feadb917216fa | p@chr14:49501519..49501530, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:65147224..65147236,-#_f83c0bbd928b8e47475feadb917216fa | p@chr1:65147224..65147236, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr7:29477874..29477889,+#_f83c0bbd928b8e47475feadb917216fa | p6@Fbxo27 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112691047..112691066,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112691047..112691066, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112692580..112692595,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112692580..112692595, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:113506190..113506202,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:113506190..113506202, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr1:65146997..65147021,-#_f83c0bbd928b8e47475feadb917216fa | p@chr1:65146997..65147021, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112690729..112690741,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690729..112690741, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr8:77582172..77582183,+#_f83c0bbd928b8e47475feadb917216fa | p@chr8:77582172..77582183, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr7:29477874..29477889,+#_f83c0bbd928b8e47475feadb917216fa | p6@Fbxo27 |
| 7.26e-58 | FFCP PHASE1:Mm9::chr14:52730585..52730607,+#_f83c0bbd928b8e47475feadb917216fa | p1@Rpgrip1 |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112681470..112681483, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_f83c0bbd928b8e47475feadb917216fa | p@chr17:31817947..31817965, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_f83c0bbd928b8e47475feadb917216fa | p4@LOC100504989, p4@Timeless |
| 7.26e-58 | FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_f83c0bbd928b8e47475feadb917216fa | p@chr17:31818629..31818644, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr3:129525405..129525428,-#_f83c0bbd928b8e47475feadb917216fa | p1@Rrh |
| 7.26e-58 | FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_f83c0bbd928b8e47475feadb917216fa | p@chr15:36655026..36655032, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112690636..112690656,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690636..112690656, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112690729..112690741,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690729..112690741, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112681470..112681483,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112681470..112681483, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr17:31818215..31818239,-#_f83c0bbd928b8e47475feadb917216fa | p@chr17:31818215..31818239, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112698505..112698537,-#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112698505..112698537, - |
| 7.26e-58 | FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_f83c0bbd928b8e47475feadb917216fa | p4@LOC100504989, p4@Timeless |
| 7.26e-58 | FFCP PHASE1:Mm9::chr14:49501519..49501530,-#_f83c0bbd928b8e47475feadb917216fa | p@chr14:49501519..49501530, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr3:129525405..129525428,-#_f83c0bbd928b8e47475feadb917216fa | p1@Rrh |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:65146997..65147021,-#_f83c0bbd928b8e47475feadb917216fa | p@chr1:65146997..65147021, - |
| 7.26e-58 | FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_f83c0bbd928b8e47475feadb917216fa | p@chr8:77582172..77582183, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr5:112690744..112690755,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690744..112690755, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:38092538..38092550,+#_f83c0bbd928b8e47475feadb917216fa | p@chr1:38092538..38092550, + |
| 7.26e-58 | FFCP PHASE2:Mm9::chr5:112690636..112690656,+#_f83c0bbd928b8e47475feadb917216fa | p@chr5:112690636..112690656, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr6:115162924..115162933,+#_f83c0bbd928b8e47475feadb917216fa | p@chr6:115162924..115162933, + |
| 7.26e-58 | FFCP PHASE1:Mm9::chr10:127668799..127668810,+#_f83c0bbd928b8e47475feadb917216fa | p5@LOC100504989, p5@Timeless |
| 7.26e-58 | FFCP PHASE2:Mm9::chr1:152166537..152166579,+#_f83c0bbd928b8e47475feadb917216fa | p1@Pdc |
| 7.26e-58 | FFCP PHASE2:Mm9::chr3:129525435..129525448,-#_f83c0bbd928b8e47475feadb917216fa | p2@Rrh |
