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|located_in=
|located_in=
|name=occipital lobe
|name=occipital lobe
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001950
|part_of=UBERON:0001950

Latest revision as of 17:24, 12 September 2014

Name:occipital lobe
Namespace:FANTOM
Definition:"Occipital lobe is the one of five lobes of the cerebral hemisphere which occupies the posterior-most portion of the hemisphere. Anteriorly, it shares an arbitrary border with the parietal lobe and temporal lobe. Medially, it is bounded by the longitudinal cerebral fissure." [Wikipedia:Occipital_lobe]
Xrefs:
links:

BTO:0000293
EFO:0000915
EV:0100170
FMA:67325
GAID:678
[ Gray727_occipital_lobe.png Gray727_occipital_lobe.png]
[ 200px-Gray727_occipital_lobe.png 200px-Gray727_occipital_lobe.png]
MA:0000913
MAT:0000507
MESH:A.08.186.211.730.885.213.571
ncithesaurus:Occipital_Lobe
NIF_GrossAnatomy:birnlex_1136
OpenCyc:Mx4rv9OFy5wpEbGdrcN5Y29ycA

SCTID:180923002
Synonyms: "lobus occipitalis" RELATED LATIN [Wikipedia:Occipital_lobe]
"occipital cortex" EXACT []
"occipital neocortex" EXACT [DHB:Ocx]
"regio occipitalis" EXACT [FMA:67325, FMA:TA]
Alt_id: UBERON:FMA_67325-MA_0000913-ZFA_0001414
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0016526(lobe of cerebral hemisphere)
part_of:UBERON:0001950(neocortex)



Children

is a:FF:0010163 (occipital cortex - adult donor),FF:10355-105E4 (occipital cortex, newborn, donor10223)
derives from:FF:0010073 (human occipital lobe - fetal sample),FF:0010076 (human occipital lobe - adult sample)
part of:UBERON:0000411 (visual cortex),UBERON:0002902 (occipital pole),FF:0010073 (human occipital lobe - fetal sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002021 (occipital lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.76e-118FFCP PHASE1:Hg19::chr7:43152322..43152325,+#_ab0bd15c20e077874114454c0d8a9794p21@HECW1
7.76e-118FFCP PHASE2:Hg19::chr7:43152322..43152325,+#_ab0bd15c20e077874114454c0d8a9794p21@HECW1
7.76e-118FFCP PHASE2:Hg19::chr2:149679731..149679740,+#_ab0bd15c20e077874114454c0d8a9794p@chr2:149679731..149679740, +
7.76e-118FFCP PHASE1:Hg19::chr2:149679731..149679740,+#_ab0bd15c20e077874114454c0d8a9794p@chr2:149679731..149679740, +
8.85e-105FFCP PHASE1:Hg19::chr20:656395..656406,-#_7a000e6a610a7301b576ef1129ece8a0p7@SRXN1
8.85e-105FFCP PHASE2:Hg19::chr20:656395..656406,-#_7a000e6a610a7301b576ef1129ece8a0p7@SRXN1
1.4e-89FFCP PHASE1:Hg19::chr2:166051474..166051485,+#_69e6185869d7b9f047a140180b9bbc8dp@chr2:166051474..166051485, +
1.4e-89FFCP PHASE2:Hg19::chr2:166051474..166051485,+#_69e6185869d7b9f047a140180b9bbc8dp@chr2:166051474..166051485, +
1.31e-86FFCP PHASE1:Mm9::chr6:80020704..80020735,+#_2de7073c03996453449511e13e256197p@chr6:80020704..80020735, +
1.31e-86FFCP PHASE2:Mm9::chr1:126404292..126404301,-#_2de7073c03996453449511e13e256197p@chr1:126404292..126404301, -
1.31e-86FFCP PHASE2:Mm9::chr1:126400744..126400756,-#_2de7073c03996453449511e13e256197p@chr1:126400744..126400756, -
1.31e-86FFCP PHASE1:Mm9::chr1:126400744..126400756,-#_2de7073c03996453449511e13e256197p@chr1:126400744..126400756, -
1.31e-86FFCP PHASE1:Mm9::chr1:126404292..126404301,-#_2de7073c03996453449511e13e256197p@chr1:126404292..126404301, -
1.31e-86FFCP PHASE1:Mm9::chr13:42849190..42849201,+#_2de7073c03996453449511e13e256197p@chr13:42849190..42849201, +
1.31e-86FFCP PHASE2:Mm9::chr1:126502309..126502340,-#_2de7073c03996453449511e13e256197p@chr1:126502309..126502340, -
1.31e-86FFCP PHASE1:Mm9::chr18:40430194..40430203,+#_2de7073c03996453449511e13e256197p@chr18:40430194..40430203, +
1.31e-86FFCP PHASE2:Mm9::chr2:7223539..7223546,-#_2de7073c03996453449511e13e256197p@chr2:7223539..7223546, -
1.31e-86FFCP PHASE2:Mm9::chr13:42849190..42849201,+#_2de7073c03996453449511e13e256197p@chr13:42849190..42849201, +
1.31e-86FFCP PHASE1:Mm9::chr11:17100262..17100269,+#_2de7073c03996453449511e13e256197p@chr11:17100262..17100269, +
1.31e-86FFCP PHASE1:Mm9::chr2:7223539..7223546,-#_2de7073c03996453449511e13e256197p@chr2:7223539..7223546, -
1.31e-86FFCP PHASE1:Mm9::chr1:126502309..126502340,-#_2de7073c03996453449511e13e256197p@chr1:126502309..126502340, -
1.31e-86FFCP PHASE2:Mm9::chr6:80020704..80020735,+#_2de7073c03996453449511e13e256197p@chr6:80020704..80020735, +
1.31e-86FFCP PHASE2:Mm9::chr18:40430194..40430203,+#_2de7073c03996453449511e13e256197p@chr18:40430194..40430203, +
1.31e-86FFCP PHASE2:Mm9::chr11:17100262..17100269,+#_2de7073c03996453449511e13e256197p@chr11:17100262..17100269, +
3.49e-79FFCP PHASE1:Hg19::chr15:90809459..90809470,+#_8c1cf379e2d490b57d7220c8d46b8d23p16@NGRN
3.49e-79FFCP PHASE2:Hg19::chr11:62476322..62476329,+#_8c1cf379e2d490b57d7220c8d46b8d23p@chr11:62476322..62476329, +
3.49e-79FFCP PHASE1:Hg19::chr1:78024449..78024457,+#_8c1cf379e2d490b57d7220c8d46b8d23p@chr1:78024449..78024457, +
3.49e-79FFCP PHASE1:Hg19::chr11:62476322..62476329,+#_8c1cf379e2d490b57d7220c8d46b8d23p@chr11:62476322..62476329, +
3.49e-79FFCP PHASE2:Hg19::chr11:1579486..1579500,-#_8c1cf379e2d490b57d7220c8d46b8d23p@chr11:1579486..1579500, -
3.49e-79FFCP PHASE2:Hg19::chr1:78024449..78024457,+#_8c1cf379e2d490b57d7220c8d46b8d23p@chr1:78024449..78024457, +
3.49e-79FFCP PHASE1:Hg19::chr11:1579486..1579500,-#_8c1cf379e2d490b57d7220c8d46b8d23p@chr11:1579486..1579500, -
3.49e-79FFCP PHASE2:Hg19::chr15:90809459..90809470,+#_8c1cf379e2d490b57d7220c8d46b8d23p16@NGRN
3.9e-79FFCP PHASE1:Mm9::chr2:20291839..20291846,+#_2fe6713daead577b81d526ca6bf8e341p@chr2:20291839..20291846, +
3.9e-79FFCP PHASE1:Mm9::chr1:126400758..126400783,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126400758..126400783, -
3.9e-79FFCP PHASE2:Mm9::chr7:52430433..52430443,+#_2fe6713daead577b81d526ca6bf8e341p@chr7:52430433..52430443, +
3.9e-79FFCP PHASE2:Mm9::chr1:126619902..126619921,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126619902..126619921, -
3.9e-79FFCP PHASE2:Mm9::chr1:126400758..126400783,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126400758..126400783, -
3.9e-79FFCP PHASE1:Mm9::chr4:76560610..76560659,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:76560610..76560659, -
3.9e-79FFCP PHASE2:Mm9::chr4:77468821..77468823,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:77468821..77468823, -
3.9e-79FFCP PHASE1:Mm9::chr4:77434471..77434475,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:77434471..77434475, -
3.9e-79FFCP PHASE1:Mm9::chr1:126203760..126203764,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126203760..126203764, -
3.9e-79FFCP PHASE1:Mm9::chr7:99597472..99597476,+#_2fe6713daead577b81d526ca6bf8e341p@chr7:99597472..99597476, +
3.9e-79FFCP PHASE1:Mm9::chr15:20450265..20450266,+#_2fe6713daead577b81d526ca6bf8e341p@chr15:20450265..20450266, +
3.9e-79FFCP PHASE2:Mm9::chr8:17186907..17186917,-#_2fe6713daead577b81d526ca6bf8e341p@chr8:17186907..17186917, -
3.9e-79FFCP PHASE2:Mm9::chr4:76560610..76560659,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:76560610..76560659, -
3.9e-79FFCP PHASE2:Mm9::chr2:20291839..20291846,+#_2fe6713daead577b81d526ca6bf8e341p@chr2:20291839..20291846, +
3.9e-79FFCP PHASE2:Mm9::chr1:126104837..126104853,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126104837..126104853, -
3.9e-79FFCP PHASE1:Mm9::chr1:126619902..126619921,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126619902..126619921, -
3.9e-79FFCP PHASE2:Mm9::chr16:6986792..6986801,+#_2fe6713daead577b81d526ca6bf8e341p@chr16:6986792..6986801, +
3.9e-79FFCP PHASE1:Mm9::chr1:126105041..126105050,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126105041..126105050, -
3.9e-79FFCP PHASE1:Mm9::chr7:90680238..90680241,-#_2fe6713daead577b81d526ca6bf8e341p@chr7:90680238..90680241, -
3.9e-79FFCP PHASE1:Mm9::chr7:52430433..52430443,+#_2fe6713daead577b81d526ca6bf8e341p@chr7:52430433..52430443, +
3.9e-79FFCP PHASE1:Mm9::chr4:77468821..77468823,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:77468821..77468823, -
3.9e-79FFCP PHASE2:Mm9::chr1:126105041..126105050,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126105041..126105050, -
3.9e-79FFCP PHASE2:Mm9::chr7:99597472..99597476,+#_2fe6713daead577b81d526ca6bf8e341p@chr7:99597472..99597476, +
3.9e-79FFCP PHASE2:Mm9::chr1:126203760..126203764,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126203760..126203764, -
3.9e-79FFCP PHASE2:Mm9::chr4:77434471..77434475,-#_2fe6713daead577b81d526ca6bf8e341p@chr4:77434471..77434475, -
3.9e-79FFCP PHASE1:Mm9::chr8:17186907..17186917,-#_2fe6713daead577b81d526ca6bf8e341p@chr8:17186907..17186917, -
3.9e-79FFCP PHASE1:Mm9::chr1:126104837..126104853,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126104837..126104853, -
3.9e-79FFCP PHASE2:Mm9::chr1:126652982..126652992,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126652982..126652992, -
3.9e-79FFCP PHASE1:Mm9::chr1:126652982..126652992,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126652982..126652992, -
3.9e-79FFCP PHASE2:Mm9::chr15:20450265..20450266,+#_2fe6713daead577b81d526ca6bf8e341p@chr15:20450265..20450266, +
3.9e-79FFCP PHASE2:Mm9::chr14:40201667..40201703,-#_2fe6713daead577b81d526ca6bf8e341p@chr14:40201667..40201703, -
3.9e-79FFCP PHASE1:Mm9::chr16:6986792..6986801,+#_2fe6713daead577b81d526ca6bf8e341p@chr16:6986792..6986801, +
3.9e-79FFCP PHASE1:Mm9::chr14:40201667..40201703,-#_2fe6713daead577b81d526ca6bf8e341p@chr14:40201667..40201703, -
3.9e-79FFCP PHASE2:Mm9::chr1:126717072..126717109,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126717072..126717109, -
3.9e-79FFCP PHASE2:Mm9::chr7:90680238..90680241,-#_2fe6713daead577b81d526ca6bf8e341p@chr7:90680238..90680241, -
3.9e-79FFCP PHASE1:Mm9::chr1:126717072..126717109,-#_2fe6713daead577b81d526ca6bf8e341p@chr1:126717072..126717109, -
4.7e-79FFCP PHASE1:Mm9::chr1:126619952..126619959,-#_4058c4bea528823925d1a8001bc80db5p@chr1:126619952..126619959, -
4.7e-79FFCP PHASE2:Mm9::chr1:126619952..126619959,-#_4058c4bea528823925d1a8001bc80db5p@chr1:126619952..126619959, -
4.7e-79FFCP PHASE1:Mm9::chr9:37352150..37352163,-#_4058c4bea528823925d1a8001bc80db5p@chr9:37352150..37352163, -
4.7e-79FFCP PHASE1:Mm9::chr4:126885535..126885547,+#_4058c4bea528823925d1a8001bc80db5p@chr4:126885535..126885547, +
4.7e-79FFCP PHASE2:Mm9::chr4:126885535..126885547,+#_4058c4bea528823925d1a8001bc80db5p@chr4:126885535..126885547, +
4.7e-79FFCP PHASE2:Mm9::chr9:37352150..37352163,-#_4058c4bea528823925d1a8001bc80db5p@chr9:37352150..37352163, -
5.66e-79FFCP PHASE2:Mm9::chr1:126404318..126404329,-#_7c2ec81d55fa2df4d5a0b67f15334ee0p@chr1:126404318..126404329, -
5.66e-79FFCP PHASE1:Mm9::chr2:129870267..129870276,+#_7c2ec81d55fa2df4d5a0b67f15334ee0p@chr2:129870267..129870276, +
5.66e-79FFCP PHASE1:Mm9::chr1:126404318..126404329,-#_7c2ec81d55fa2df4d5a0b67f15334ee0p@chr1:126404318..126404329, -
5.66e-79FFCP PHASE2:Mm9::chr2:129870267..129870276,+#_7c2ec81d55fa2df4d5a0b67f15334ee0p@chr2:129870267..129870276, +
6.82e-79FFCP PHASE2:Mm9::chr18:40431328..40431331,+#_227af380cf23c2598a76976160d70f6ap@chr18:40431328..40431331, +
6.82e-79FFCP PHASE1:Mm9::chr18:40431328..40431331,+#_227af380cf23c2598a76976160d70f6ap@chr18:40431328..40431331, +
1.59e-78FFCP PHASE2:Hg19::chr2:50215753..50215758,-#_cb56a4ee1d72feffb047f7f06a83b8e9p@chr2:50215753..50215758, -
1.59e-78FFCP PHASE1:Hg19::chr2:50215753..50215758,-#_cb56a4ee1d72feffb047f7f06a83b8e9p@chr2:50215753..50215758, -
5.74e-78FFCP PHASE2:Mm9::chr9:37353524..37353532,+#_8afe1529c40b87b914d7b393d5068553p@chr9:37353524..37353532, +
5.74e-78FFCP PHASE2:Mm9::chr2:42019112..42019120,-#_8afe1529c40b87b914d7b393d5068553p@chr2:42019112..42019120, -
5.74e-78FFCP PHASE2:Mm9::chr7:64568462..64568466,-#_8afe1529c40b87b914d7b393d5068553p@chr7:64568462..64568466, -
5.74e-78FFCP PHASE2:Mm9::chr16:75308220..75308224,-#_8afe1529c40b87b914d7b393d5068553p@chr16:75308220..75308224, -
5.74e-78FFCP PHASE2:Mm9::chr15:20964798..20964802,+#_8afe1529c40b87b914d7b393d5068553p@chr15:20964798..20964802, +
5.74e-78FFCP PHASE1:Mm9::chr7:98325289..98325298,+#_8afe1529c40b87b914d7b393d5068553p@chr7:98325289..98325298, +
5.74e-78FFCP PHASE1:Mm9::chr10:109586641..109586671,-#_8afe1529c40b87b914d7b393d5068553p@chr10:109586641..109586671, -
5.74e-78FFCP PHASE1:Mm9::chr15:20964798..20964802,+#_8afe1529c40b87b914d7b393d5068553p@chr15:20964798..20964802, +
5.74e-78FFCP PHASE1:Mm9::chr4:76204951..76204975,-#_8afe1529c40b87b914d7b393d5068553p@chr4:76204951..76204975, -
5.74e-78FFCP PHASE2:Mm9::chr1:126099259..126099261,-#_8afe1529c40b87b914d7b393d5068553p@chr1:126099259..126099261, -
5.74e-78FFCP PHASE1:Mm9::chr16:75308220..75308224,-#_8afe1529c40b87b914d7b393d5068553p@chr16:75308220..75308224, -
5.74e-78FFCP PHASE2:Mm9::chr1:126461420..126461468,-#_8afe1529c40b87b914d7b393d5068553p@chr1:126461420..126461468, -
5.74e-78FFCP PHASE2:Mm9::chr1:126136825..126136836,-#_8afe1529c40b87b914d7b393d5068553p@chr1:126136825..126136836, -
5.74e-78FFCP PHASE1:Mm9::chr4:138013853..138013861,+#_8afe1529c40b87b914d7b393d5068553p@chr4:138013853..138013861, +
5.74e-78FFCP PHASE2:Mm9::chr6:110711128..110711143,+#_8afe1529c40b87b914d7b393d5068553p@chr6:110711128..110711143, +
5.74e-78FFCP PHASE1:Mm9::chr1:126136825..126136836,-#_8afe1529c40b87b914d7b393d5068553p@chr1:126136825..126136836, -
5.74e-78FFCP PHASE2:Mm9::chr1:156389511..156389544,-#_8afe1529c40b87b914d7b393d5068553p@chr1:156389511..156389544, -
5.74e-78FFCP PHASE2:Mm9::chr6:102215690..102215693,-#_8afe1529c40b87b914d7b393d5068553p@chr6:102215690..102215693, -

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