UBERON:0002169: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=alveolar sac | |name=alveolar sac | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0008874;;UBERON:0006524;;UBERON:0008874 | |part_of=UBERON:0008874;;UBERON:0006524;;UBERON:0008874 | ||
Latest revision as of 17:27, 12 September 2014
| Name: | alveolar sac | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the small terminal dilation of the alveolar ducts around which the alveoli form pocket-like clusters" [MP:0010902, Wikipedia:Alveolar_sac] | ||
| Xrefs: |
| ||
| Synonyms: |
"air sac" RELATED [MP:0010902] "pulmonary alveolar sac" EXACT [MP:0010902] "sacculus alveolaris" EXACT [FMA:7317] | ||
| Alt_id: |
UBERON:0008871 UBERON:FMA_7317-MA_0000418 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000115(lung epithelium),UBERON:0000117(respiratory tube),UBERON:0007499(epithelial sac) |
|---|---|
| part_of: | UBERON:0008874(pulmonary acinus),UBERON:0006524(alveolar system),UBERON:0008874(pulmonary acinus) |
Children
| part of: | UBERON:0002299 (alveolus of lung) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11510-119G7 (Alveolar Epithelial Cells, donor1)
- 11671-122G6 (Alveolar Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002169 (alveolar sac), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_8334a9f0dc11f21f962669000e80bb43 | p13@CPXM1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_8334a9f0dc11f21f962669000e80bb43 | p13@CPXM1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_8334a9f0dc11f21f962669000e80bb43 | p1@SSX5 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_8334a9f0dc11f21f962669000e80bb43 | p12@CPXM1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_8334a9f0dc11f21f962669000e80bb43 | p1@SSX5 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_8334a9f0dc11f21f962669000e80bb43 | p12@CPXM1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr17:63511856..63511858, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr17:13574618..13574636, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr17:63511856..63511858, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_8334a9f0dc11f21f962669000e80bb43 | p16@CPXM1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr17:13574618..13574636, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr14:36536932..36536937, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr14:36536932..36536937, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_8334a9f0dc11f21f962669000e80bb43 | p16@CPXM1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_8334a9f0dc11f21f962669000e80bb43 | p1@ENST00000418699, p1@ENST00000432330 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_8334a9f0dc11f21f962669000e80bb43 | p14@DNMBP |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr3:87647430..87647437, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_8334a9f0dc11f21f962669000e80bb43 | p1@ENST00000418699, p1@ENST00000432330 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_8334a9f0dc11f21f962669000e80bb43 | p12@CLEC16A |
| 2.39e-66 | FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_8334a9f0dc11f21f962669000e80bb43 | p12@CLEC16A |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_8334a9f0dc11f21f962669000e80bb43 | p@chr3:87647430..87647437, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_8334a9f0dc11f21f962669000e80bb43 | p14@DNMBP |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_8334a9f0dc11f21f962669000e80bb43 | p9@CPXM1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_8334a9f0dc11f21f962669000e80bb43 | p1@ENST00000430271 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_8334a9f0dc11f21f962669000e80bb43 | p13@DNMBP |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_8334a9f0dc11f21f962669000e80bb43 | p9@CPXM1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_8334a9f0dc11f21f962669000e80bb43 | p1@ENST00000430271 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_8334a9f0dc11f21f962669000e80bb43 | p13@DNMBP |
| 1.53e-44 | FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_63c468a0ff678c8c94d4c4b252fdef77 | p@chr2:191696381..191696384, - |
| 1.53e-44 | FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_63c468a0ff678c8c94d4c4b252fdef77 | p@chr2:191696381..191696384, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p3@FMR1NB |
| 4.27e-34 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p3@FMR1NB |
| 4.27e-34 | FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p30@PDP1 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p30@PDP1 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:104005546..104005596, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p7@DNMBP |
| 4.27e-34 | FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr9:103785643..103785646, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:104005546..104005596, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr9:103785643..103785646, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p7@DNMBP |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:41809203..41809208, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:106266838..106266843, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:41809203..41809208, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p30@NELF |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr11:106266838..106266843, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p30@NELF |
| 4.27e-34 | FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p11@DNMBP |
| 4.27e-34 | FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr8:122157279..122157284, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr8:122157279..122157284, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr4:169956294..169956301, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p11@DNMBP |
| 4.27e-34 | FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_1f1473c0f8284e9ad896f5a56bee56e6 | p@chr4:169956294..169956301, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:46985426..46985427, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_9a43b8b80ad0dcbab4168aef220d58ea | p12@AADAT |
| 5.96e-34 | FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr15:55806847..55806854, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399263..45399274, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:169691363..169691375, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr15:55806847..55806854, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_9a43b8b80ad0dcbab4168aef220d58ea | p12@AADAT |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_9a43b8b80ad0dcbab4168aef220d58ea | p36@NELF |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:46985426..46985427, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr12:65386452..65386492, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399263..45399274, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr12:65386452..65386492, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:169691363..169691375, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:141743015..141743025, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_9a43b8b80ad0dcbab4168aef220d58ea | p36@NELF |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399294..45399301, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:141743015..141743025, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_9a43b8b80ad0dcbab4168aef220d58ea | p34@NELF |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr1:93054640..93054674, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45405332..45405343, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399294..45399301, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr1:119837700..119837705, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_9a43b8b80ad0dcbab4168aef220d58ea | p34@NELF |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr1:119837700..119837705, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr1:93054640..93054674, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45405332..45405343, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr17:63533845..63533851, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_9a43b8b80ad0dcbab4168aef220d58ea | p6@INSIG2 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45405393..45405412, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr17:63533845..63533851, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_9a43b8b80ad0dcbab4168aef220d58ea | p6@INSIG2 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45405393..45405412, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399533..45399540, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr3:139035972..139036016, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr3:139035972..139036016, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399533..45399540, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399245..45399258, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_9a43b8b80ad0dcbab4168aef220d58ea | p5@C20orf141 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_9a43b8b80ad0dcbab4168aef220d58ea | p@chr6:45399245..45399258, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_9a43b8b80ad0dcbab4168aef220d58ea | p5@C20orf141 |
| 1.71e-30 | FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_4235a6dbeda04eb9df2ea4dba81813ba | p1@BC018659 |
| 1.71e-30 | FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_4235a6dbeda04eb9df2ea4dba81813ba | p1@BC018659 |
| 1.59e-27 | FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_34c67c16b6800d26cd83fafae6a2b49b | p@chr14:29047235..29047244, + |
| 1.59e-27 | FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_34c67c16b6800d26cd83fafae6a2b49b | p@chr14:29047235..29047244, + |
| 3.56e-27 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_7ccbb7bf70ebaf9c541f9158454dc15c | p@chr17:171082..171101, + |
| 3.56e-27 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_7ccbb7bf70ebaf9c541f9158454dc15c | p@chr17:171082..171101, + |
| 7.93e-25 | FFCP PHASE1:Hg19::chr7:27163592..27163605,-#_599b5edc149093c0927c2fee33189743 | p@chr7:27163592..27163605, - |
| 7.93e-25 | FFCP PHASE2:Hg19::chr7:27163592..27163605,-#_599b5edc149093c0927c2fee33189743 | p@chr7:27163592..27163605, - |
