UBERON:0003063: Difference between revisions
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|located_in= | |located_in= | ||
|name=prechordal plate | |name=prechordal plate | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0003068 | |part_of=UBERON:0000922;;UBERON:0003068 | ||
Latest revision as of 17:36, 12 September 2014
| Name: | prechordal plate | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells[GO]. Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region[ZFA]. Uniquely thickened portion of the endoderm that is in contact with ectoderm immediately rostral to the cephalic tip of the notochord[WP]." [Wikipedia:Prechordal_plate, ZFIN:curator] | ||
| Xrefs: |
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| Synonyms: |
"head mesenchyme" BROAD [XAO:0000079] "head mesoderm" BROAD [XAO:0000079] | ||
| Comments: | todo - check; developmental relationship to anterior hypoblast in ZFA? | ||
| Alt_id: |
UBERON:0004881 UBERON:XAO_0000079-ZFA_0000060 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0003068(axial mesoderm) |
Children
| develops from: | UBERON:0006904 (head mesenchyme from mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003063 (prechordal plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
Property "Property value" (as page type) with input value "UBPROP:0000001 "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
