UBERON:0005171: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=hepatic duct | |name=hepatic duct | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001173 | |part_of=UBERON:0001173 | ||
Latest revision as of 17:51, 12 September 2014
| Name: | hepatic duct | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011] | ||
| Xrefs: |
| ||
| Comments: | TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002394(bile duct) |
|---|---|
| part_of: | UBERON:0001173(biliary tree) |
Children
| develops from: | UBERON:0001280 (liver parenchyma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005171 (hepatic duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3a | p2@ENST00000448698 |
| 9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3a | p2@ENST00000448698 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:39297570..39297573, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_4d0af0543b7169012267506dfa6a469b | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_4d0af0543b7169012267506dfa6a469b | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_4d0af0543b7169012267506dfa6a469b | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:163794592..163794593, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_4d0af0543b7169012267506dfa6a469b | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_4d0af0543b7169012267506dfa6a469b | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:34798597..34798606, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:35945332..35945335, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:35945332..35945335, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_4d0af0543b7169012267506dfa6a469b | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35094068..35094092, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_4d0af0543b7169012267506dfa6a469b | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_4d0af0543b7169012267506dfa6a469b | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:127816016..127816021, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_4d0af0543b7169012267506dfa6a469b | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_4d0af0543b7169012267506dfa6a469b | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35094068..35094092, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_4d0af0543b7169012267506dfa6a469b | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_4d0af0543b7169012267506dfa6a469b | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_4d0af0543b7169012267506dfa6a469b | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_4d0af0543b7169012267506dfa6a469b | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_4d0af0543b7169012267506dfa6a469b | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_4d0af0543b7169012267506dfa6a469b | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_4d0af0543b7169012267506dfa6a469b | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:163794592..163794593, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_4d0af0543b7169012267506dfa6a469b | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:43407825..43407830, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_4d0af0543b7169012267506dfa6a469b | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_4d0af0543b7169012267506dfa6a469b | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_4d0af0543b7169012267506dfa6a469b | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:34798597..34798606, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_4d0af0543b7169012267506dfa6a469b | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_4d0af0543b7169012267506dfa6a469b | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_4d0af0543b7169012267506dfa6a469b | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:111108947..111108951, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
