UBERON:0005498: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=primitive heart tube | |name=primitive heart tube | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922 | |part_of=UBERON:0000922 | ||
Latest revision as of 17:54, 12 September 2014
| Name: | primitive heart tube | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Multi-tissue structure that arises from the heart rudiment and will become the heart tube." [ZFA:0000149] | ||
| Xrefs: |
| ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000481(multi-tissue structure),UBERON:0002050(embryonic structure),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0004291(heart rudiment) |
| part_of: | UBERON:0000922(embryo) |
Children
| develops from: | UBERON:0004141 (heart tube) |
|---|---|
| part of: | UBERON:0002061 (truncus arteriosus),UBERON:0006283 (future cardiac ventricle),UBERON:0007280 (presumptive endocardium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005498 (primitive heart tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.09e-81 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr4:147375434..147375447, + |
| 1.09e-81 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr1:137747392..137747402, - |
| 1.09e-81 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr9:24549775..24549776, - |
| 1.09e-81 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr4:147375434..147375447, + |
| 1.09e-81 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr9:24549775..24549776, - |
| 1.09e-81 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_f412ca5050337f7f8749c4bdf6acc6a4 | p@chr1:137747392..137747402, - |
| 1.88e-78 | FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_87e5b145081bd067eb79b485e492b63e | p@chr4:140980456..140980463, + |
| 1.88e-78 | FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_87e5b145081bd067eb79b485e492b63e | p@chr4:140980456..140980463, + |
| 1.92e-77 | FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_df95c9c581a8eb1dfaea770be3c20511 | p@chr1:137737483..137737497, - |
| 1.92e-77 | FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_df95c9c581a8eb1dfaea770be3c20511 | p@chr12:113728951..113728965, + |
| 1.92e-77 | FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_df95c9c581a8eb1dfaea770be3c20511 | p@chr12:113728951..113728965, + |
| 1.92e-77 | FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_df95c9c581a8eb1dfaea770be3c20511 | p@chr1:137737483..137737497, - |
| 2.14e-77 | FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_7e95142989f30759f6269004c64df071 | p@chr4:147375200..147375220, + |
| 2.14e-77 | FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_7e95142989f30759f6269004c64df071 | p@chr4:147375200..147375220, + |
| 2.14e-77 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_7e95142989f30759f6269004c64df071 | p@chr19:36187511..36187515, - |
| 2.14e-77 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_7e95142989f30759f6269004c64df071 | p@chr19:36187511..36187515, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744636..137744654, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568937..55568988, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_6b7c5e618663531f19325d6e488d2768 | p@chr5:120286706..120286736, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137745434..137745445, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_6b7c5e618663531f19325d6e488d2768 | p@chr19:36193772..36193793, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_6b7c5e618663531f19325d6e488d2768 | p@chr11:65461897..65461929, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747289..137747313, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_6b7c5e618663531f19325d6e488d2768 | p@chr11:58815923..58815951, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568790..55568803, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744611..137744621, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_6b7c5e618663531f19325d6e488d2768 | p2@Mov10l1 |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55571909..55571953, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55579265..55579297, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55563577..55563611, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744668..137744681, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584197..55584239, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744333..137744352, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137743272..137743307, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55563577..55563611, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747289..137747313, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584272..55584298, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744668..137744681, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_6b7c5e618663531f19325d6e488d2768 | p@chr11:58815923..58815951, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568737..55568746, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_6b7c5e618663531f19325d6e488d2768 | p@chr5:120286706..120286736, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744550..137744565, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55586837..55586880, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_6b7c5e618663531f19325d6e488d2768 | p@chr4:147375901..147375913, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55572120..55572173, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_6b7c5e618663531f19325d6e488d2768 | p@chr19:36193772..36193793, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55586837..55586880, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568937..55568988, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_6b7c5e618663531f19325d6e488d2768 | p2@Mov10l1 |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744611..137744621, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568790..55568803, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55579265..55579297, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747953..137747967, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747953..137747967, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_6b7c5e618663531f19325d6e488d2768 | p@chr11:65461897..65461929, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584272..55584298, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_6b7c5e618663531f19325d6e488d2768 | p@chr4:147375901..147375913, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744333..137744352, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744636..137744654, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747382..137747385, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584663..55584731, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137743272..137743307, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55572120..55572173, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55581579..55581620, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55571909..55571953, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584197..55584239, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55565785..55565833, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137745434..137745445, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55581579..55581620, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137744550..137744565, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55568737..55568746, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55565785..55565833, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_6b7c5e618663531f19325d6e488d2768 | p@chr1:137747382..137747385, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_6b7c5e618663531f19325d6e488d2768 | p@chr14:55584663..55584731, - |
| 1.2e-73 | FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_301241cb8b70b8a1851796d604c71d8a | p@chr1:137742152..137742184, - |
| 1.2e-73 | FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_301241cb8b70b8a1851796d604c71d8a | p@chr1:137742152..137742184, - |
| 1.46e-72 | FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_f08521838182c36c801eb0af88b0a1c6 | p@chr1:137742470..137742481, + |
| 1.46e-72 | FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_f08521838182c36c801eb0af88b0a1c6 | p@chr14:55577329..55577367, - |
| 1.46e-72 | FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_f08521838182c36c801eb0af88b0a1c6 | p@chr16:5431481..5431510, + |
| 1.46e-72 | FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_f08521838182c36c801eb0af88b0a1c6 | p2@Tnni3 |
| 1.46e-72 | FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_f08521838182c36c801eb0af88b0a1c6 | p@chr14:55577329..55577367, - |
| 1.46e-72 | FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_f08521838182c36c801eb0af88b0a1c6 | p@chr1:137742470..137742481, + |
| 1.46e-72 | FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_f08521838182c36c801eb0af88b0a1c6 | p@chr16:5431481..5431510, + |
| 1.46e-72 | FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_f08521838182c36c801eb0af88b0a1c6 | p2@Tnni3 |
| 1.63e-72 | FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_3904e3be89e0a62ba3eee1756e816d69 | p@chr10:53062244..53062249, + |
| 1.63e-72 | FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_3904e3be89e0a62ba3eee1756e816d69 | p@chr5:58108164..58108178, + |
| 1.63e-72 | FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_3904e3be89e0a62ba3eee1756e816d69 | p@chr10:53062244..53062249, + |
| 1.63e-72 | FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_3904e3be89e0a62ba3eee1756e816d69 | p5@Nebl |
| 1.63e-72 | FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_3904e3be89e0a62ba3eee1756e816d69 | p11@Arhgap31 |
| 1.63e-72 | FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_3904e3be89e0a62ba3eee1756e816d69 | p5@Nebl |
| 1.63e-72 | FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_3904e3be89e0a62ba3eee1756e816d69 | p@chr5:58108164..58108178, + |
| 1.63e-72 | FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_3904e3be89e0a62ba3eee1756e816d69 | p1@ENSMUST00000154140 |
| 1.63e-72 | FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_3904e3be89e0a62ba3eee1756e816d69 | p1@ENSMUST00000154140 |
| 1.63e-72 | FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_3904e3be89e0a62ba3eee1756e816d69 | p@chr19:36193739..36193752, - |
| 1.63e-72 | FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_3904e3be89e0a62ba3eee1756e816d69 | p@chr19:36193739..36193752, - |
| 1.63e-72 | FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_3904e3be89e0a62ba3eee1756e816d69 | p11@Arhgap31 |
| 1.82e-72 | FFCP PHASE1:Mm9::chr9:24529233..24529237,-#_4793c2bb7ccc46d1b0c4fb0c65a3dbbd | p@chr9:24529233..24529237, - |
| 1.82e-72 | FFCP PHASE2:Mm9::chr9:24529233..24529237,-#_4793c2bb7ccc46d1b0c4fb0c65a3dbbd | p@chr9:24529233..24529237, - |
| 2.03e-72 | FFCP PHASE2:Mm9::chr2:30851059..30851089,+#_0e767564f985027d5f5fdac7f8cdd0e8 | p6@Usp20 |
| 2.03e-72 | FFCP PHASE1:Mm9::chr2:30851059..30851089,+#_0e767564f985027d5f5fdac7f8cdd0e8 | p6@Usp20 |
