UBERON:0010133: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=neuroendocrine gland | |name=neuroendocrine gland | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001016 | |part_of=UBERON:0001016 | ||
Latest revision as of 18:08, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002368(endocrine gland) |
|---|---|
| part_of: | UBERON:0001016(nervous system) |
Children
| is a: | UBERON:0000007 (pituitary gland),UBERON:0010134 (secretory circumventricular organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
... further results Mouse (Mus musculus)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010133 (neuroendocrine gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.57e-195 | FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 2.57e-195 | FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 1.0e-156 | FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.0e-156 | FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.5e-156 | FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 1.5e-156 | FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 2.79e-131 | FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 2.79e-131 | FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 1.07e-130 | FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.07e-130 | FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.0e-112 | FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.0e-112 | FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.76e-111 | FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 1.76e-111 | FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 8.91e-111 | FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 8.91e-111 | FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 2.76e-110 | FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 2.76e-110 | FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 5.02e-99 | FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 5.02e-99 | FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 1.38e-98 | FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.38e-98 | FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:130017368..130017390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:130017368..130017390, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:87751931..87751947,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:87751931..87751947, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:20985967..20985972,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p28@KCNIP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:49512240..49512248,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr14:49512240..49512248, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:37668094..37668097,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@FRMPD1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:49547457..49547458,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@CGB5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:75733141..75733143,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:75733141..75733143, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473983..135473986,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473983..135473986, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:45782001..45782009,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:45782001..45782009, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:99033409..99033415,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p16@MATN2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:240043364..240043366,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:240043364..240043366, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:158734173..158734183,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p7@TULP4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:58401898..58401905,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr20:58401898..58401905, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:57907030..57907050,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:57907030..57907050, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:56628548..56628553,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:56628548..56628553, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p28@KCNIP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:13820103..13820109,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:13820103..13820109, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9782665..9782674,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9782665..9782674, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p17@MATN2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9228468..9228494,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9228468..9228494, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:49547457..49547458,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@CGB5 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:18021982..18021985,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@MYO15A |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61996393..61996421,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p4@CSHL1, p4@GH1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18040537..18040547,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18040537..18040547, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22294730..22294743,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@PRL |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61996155..61996158,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@GH1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:1210506..1210513,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:1210506..1210513, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:55422565..55422604, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:52650486..52650491,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:52650486..52650491, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:154540028..154540037,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p4@CHRNB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:136699666..136699696,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr5:136699666..136699696, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:6956383..6956390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:6956383..6956390, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:130248877..130248886,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:130248877..130248886, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr15:55470964..55470974,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr15:55470964..55470974, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135520309..135520324,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135520309..135520324, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:168250194..168250197,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@TBX19 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:32468385..32468392,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:32468385..32468392, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:56963093..56963105,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr18:56963093..56963105, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:108616342..108616384,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:108616342..108616384, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:135964996..135965001,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:135964996..135965001, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:99734965..99734976,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:99734965..99734976, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22290447..22290450,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22290447..22290450, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61995410..61995414,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995410..61995414, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:135732714..135732721,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@ENST00000514282 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:107844170..107844179,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:107844170..107844179, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135515957..135515964,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135515957..135515964, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:118521917..118521922,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:118521917..118521922, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:89881348..89881356,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:89881348..89881356, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22287787..22287798,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287787..22287798, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:18066319..18066337,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18066319..18066337, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:31006649..31006651,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:31006649..31006651, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17064630..17064651,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17064630..17064651, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61994797..61994839,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61994797..61994839, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22287695..22287700,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287695..22287700, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:18580269..18580290,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr10:18580269..18580290, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:204620238..204620253,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:204620238..204620253, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:57914399..57914402,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:57914399..57914402, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135499228..135499260,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135499228..135499260, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:31003580..31003589,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@GHRHR |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:56582028..56582062, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:17075761..17075773,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17075761..17075773, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135472861..135472868,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135472861..135472868, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:6328202..6328224,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@BC014398 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:87755845..87755852,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@CNGB3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:116127086..116127103,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:116127086..116127103, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22287619..22287636,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287619..22287636, - |
