UBERON:0011137: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=axial skeletal system | |name=axial skeletal system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:10, 12 September 2014
| Name: | axial skeletal system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000075(subdivision of skeletal system) |
|---|
Children
| part of: | UBERON:0002328 (notochord),UBERON:0010323 (cranial skeletal system) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
... further results Mouse (Mus musculus)
- 10195-103E6 (olfactory region, adult)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011137 (axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_88219e40f6759d4b740fc1dfc61e6e3a | p5@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_88219e40f6759d4b740fc1dfc61e6e3a | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_88219e40f6759d4b740fc1dfc61e6e3a | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_88219e40f6759d4b740fc1dfc61e6e3a | p9@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_88219e40f6759d4b740fc1dfc61e6e3a | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_88219e40f6759d4b740fc1dfc61e6e3a | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chrX:154140800..154140810, + |
