FFCP PHASE1:Hg19::chr17:6983550..6983578,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16916 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IUN9 | ||
|association_with_transcript=21bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | |association_with_transcript=21bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | ||
|cluster_id=chr17:6983550..6983578,- | |cluster_id=chr17:6983550..6983578,- | ||
Latest revision as of 03:19, 17 September 2015
| Short description: | p1@CLEC10A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CLEC10A_5end |
| Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
| Association with transcript: | 21bp_to_ENST00000254868, ENST00000416562, NM_006344, NM_182906, uc002gej.2, uc002gek.2, uc002gel.2, uc010clv.1_5end |
| EntrezGene: | CLEC10A |
| HGNC: | 16916 |
| UniProt: | Q8IUN9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CLEC10A |
|---|
0
50
100
150
200
250
300
350
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| macrophage dendritic cell progenitor | 6.11e-58 | 61 |
| monopoietic cell | 3.17e-55 | 59 |
| monocyte | 3.17e-55 | 59 |
| monoblast | 3.17e-55 | 59 |
| promonocyte | 3.17e-55 | 59 |
| granulocyte monocyte progenitor cell | 8.83e-53 | 67 |
| defensive cell | 8.32e-52 | 48 |
| phagocyte | 8.32e-52 | 48 |
| myeloid leukocyte | 7.64e-48 | 72 |
| myeloid lineage restricted progenitor cell | 2.11e-47 | 66 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 9.06e-57 | 98 |
| blood island | 9.06e-57 | 98 |
| hemolymphoid system | 5.17e-53 | 108 |
| bone marrow | 3.20e-44 | 76 |
| immune system | 6.02e-42 | 93 |
| bone element | 1.43e-39 | 82 |
| skeletal element | 2.36e-34 | 90 |
| skeletal system | 4.90e-29 | 100 |
| lateral plate mesoderm | 5.70e-27 | 203 |
| adult organism | 3.46e-22 | 114 |
Showing 1 to 10 of 26 entries
