FFCP PHASE1:Hg19::chr3:115342338..115342343,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4140 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8K0Y4 | ||
|association_with_transcript=-13bp_to_ENST00000393780_5end | |association_with_transcript=-13bp_to_ENST00000393780_5end | ||
|cluster_id=chr3:115342338..115342343,+ | |cluster_id=chr3:115342338..115342343,+ | ||
Latest revision as of 17:50, 19 September 2015
| Short description: | p6@GAP43 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_GAP43_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -13bp_to_ENST00000393780_5end |
| EntrezGene: | GAP43 |
| HGNC: | 4140 |
| UniProt: | A8K0Y4 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@GAP43 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.74e-89 | 56 |
| neural rod | 2.74e-89 | 56 |
| future spinal cord | 2.74e-89 | 56 |
| neural keel | 2.74e-89 | 56 |
| central nervous system | 1.19e-87 | 81 |
| regional part of forebrain | 3.54e-84 | 41 |
| forebrain | 3.54e-84 | 41 |
| anterior neural tube | 3.54e-84 | 41 |
| future forebrain | 3.54e-84 | 41 |
| regional part of nervous system | 7.66e-84 | 53 |
Showing 1 to 10 of 92 entries
