FFCP PHASE1:Hg19::chr5:147582568..147582578,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=404203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29486 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6UWN8 | ||
|association_with_transcript=164bp_to_ENST00000325630,uc003lpa.2_5end | |association_with_transcript=164bp_to_ENST00000325630,uc003lpa.2_5end | ||
|cluster_id=chr5:147582568..147582578,+ | |cluster_id=chr5:147582568..147582578,+ | ||
Latest revision as of 23:41, 15 September 2015
| Short description: | p8@SPINK6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_SPINK6_5end |
| Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
| Association with transcript: | 164bp_to_ENST00000325630, uc003lpa.2_5end |
| EntrezGene: | SPINK6 |
| HGNC: | 29486 |
| UniProt: | Q6UWN8 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@SPINK6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| larynx | 1.39e-136 | 9 |
| upper respiratory tract | 1.70e-64 | 19 |
| respiratory primordium | 5.59e-32 | 38 |
| endoderm of foregut | 5.59e-32 | 38 |
| segment of respiratory tract | 9.82e-26 | 47 |
| respiratory tract | 2.60e-22 | 54 |
| respiratory system | 4.37e-16 | 74 |
| foregut | 1.45e-13 | 87 |
| subdivision of digestive tract | 1.08e-09 | 118 |
| primordium | 1.12e-08 | 160 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.38e-13 | 106 |
| cell type cancer | 5.78e-12 | 143 |
| cancer | 3.16e-08 | 235 |
| disease of cellular proliferation | 4.97e-08 | 239 |
Showing 1 to 4 of 4 entries
