FFCP PHASE2:Hg19::chr9:134165063..134165134,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:84814 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28174 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28174 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8NBV4 | ||
|association_with_transcript=0bp_to_ENST00000372264,NM_032728,uc004cal.2_5end | |association_with_transcript=0bp_to_ENST00000372264,NM_032728,uc004cal.2_5end | ||
|cluster_id=chr9:134165063..134165134,+ | |cluster_id=chr9:134165063..134165134,+ | ||
Latest revision as of 02:28, 16 September 2015
| Short description: | p1@PPAPDC3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PPAPDC3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000372264, NM_032728, uc004cal.2_5end |
| EntrezGene: | PPAPDC3 |
| HGNC: | 28174 |
| UniProt: | Q8NBV4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@PPAPDC3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 1.33e-11 | 58 |
| myoblast | 1.33e-11 | 58 |
| multi-potent skeletal muscle stem cell | 1.33e-11 | 58 |
| muscle cell | 2.23e-10 | 55 |
| electrically responsive cell | 3.41e-09 | 61 |
| electrically active cell | 3.41e-09 | 61 |
| smooth muscle cell | 2.40e-08 | 43 |
| smooth muscle myoblast | 2.40e-08 | 43 |
| fibroblast | 3.35e-08 | 76 |
| vascular associated smooth muscle cell | 4.29e-08 | 32 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.97e-23 | 114 |
| neural tube | 1.06e-21 | 56 |
| neural rod | 1.06e-21 | 56 |
| future spinal cord | 1.06e-21 | 56 |
| neural keel | 1.06e-21 | 56 |
| regional part of nervous system | 1.41e-20 | 53 |
| regional part of brain | 1.41e-20 | 53 |
| structure with developmental contribution from neural crest | 1.95e-20 | 132 |
| brain | 4.57e-18 | 68 |
| future brain | 4.57e-18 | 68 |
Showing 1 to 10 of 85 entries
