Personal tools

FFCP PHASE1:Mm9::chr10:41196132..41196198,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:41196132..41196198,+
|short_description=p1@Mical1
|description=CAGE_peak_1_at_Mical1_5end
|association_with_transcript=0bp_to_ENSMUST00000099934,ENSMUST00000126436,ENSMUST00000134010_5end
|EntrezGene=171580
|EntrezGene=171580
|HGNC=
|HGNC=
|UniProt=E9PXR1,E9PUI4
|UniProt=E9PXR1,E9PUI4
|association_with_transcript=0bp_to_ENSMUST00000099934,ENSMUST00000126436,ENSMUST00000134010_5end
|description=CAGE_peak_1_at_Mical1_5end
|id=chr10:41196132..41196198,+
|ontology_enrichment_disease=
|phase1_expression=11.0502704502308,109.927253406399,89.6348501597386,293.995213390239,272.988172820759,22.6637017081051,22.8940387783615,50.0998494953316,19.42884365693,22.7042590532334,3.76679530096111,2.15384829287408,35.2673503658284,47.9063805256106,12.6581709489952,15.5905955890166,4.19737126876888,70.6635250402452,68.5572168028694,59.4145512517242,6.29320347117916,55.5036417212949,48.321960990703,42.877969308633,41.7524891542249,62.5912840885372,48.2453435698164,41.5859479083766,45.6056206695297,84.4300934695768,22.1730510655305,15.8757668364908,15.3766196896143,0,5.19932915552294,6.81562045969819,3.06254034393554,131.418932051389,64.8508335954754,77.4815141081221,120.587455046358,108.604232108393,93.2179877819815,5.16176953699867,5.27160042341476,1.46837401729345,14.0830441982647,8.93903141159831,10.9843091367236,6.9994763666742,11.6188729949051,11.5002051491977,56.7105208475149,26.8383992544197,55.1193830593641,54.2817410035848,56.1605542279963,29.3933092598142,8.9019242778223,8.99284664762456,10.1413024560989,13.8926258148344,14.2287167377782,16.6481447697059,27.6882581518753,27.7087244828979,14.081205194365,9.60545763303886,14.2054768862614,13.5005938331691,12.8298226424343,14.8538511889978,17.4486147351775,13.7189695120749,12.0765293482978,15.6267193723704,4.40463523997555,3.19218345212969,3.5329502648936,10.5509030184155,8.59983849862651,10.939180781692,3.90856198601933,2.25105044012672,3.51435969886663,11.490514833473,11.9592211871246,10.8111678578674,23.6265723199534,25.3164726357731,13.0439019915755,4.30211938490693,0,0.539703191637817,0,0,11.7973312910672,61.6957767732569,46.2419088193106,53.7076153255717,35.0700115243934,51.3305909657271,61.153257529595,49.7746692207332,2.16491041011214,2.02687892380079,2.02209778005913,20.2105467102736,42.7247508017833,5.04703272820404,13.3583701609925,10.0473607843007,11.5307748628029,7.08396410597326,9.64227398512779,3.89566433121994,44.4950941921873,14.8937337627509,23.8844849026466,13.9119490954772,18.7715290691335,16.9706338597328,11.1835056730873,2.63502717310392,2.72280718857492,83.2789999980008,34.626570982211,19.7967901227825,31.0051354058278,4.6435098215495,0.457500602818626,15.2041766056566,4.51943232499919,5.11430914660661,3.1168206683934,6.81413304884582,12.220723662038,18.9098595327341,2.0217820674694,5.05060454127538,12.8819238533077,14.0240283704418,18.0062129805349,15.3718914192429,16.1246502988647,13.9643955110486,11.6190138454064,6.46758426847539,16.1675994699632,13.0483195315795,15.8356011747554,17.535658594206,17.5169767012127,17.0643561595862,19.1377386859387,10.7478504081986,25.9818879305897,25.7347907114715,37.7937454196138,14.9130556225561,20.1692411583743,13.1445304866541,13.7311946639422,17.3152523937715,18.357786433598,18.6027155800326,15.2915838797783,23.9368951852697,19.7471819896177,17.5659186564632,15.2409361946209,13.8889988054066,9.00155472693308,12.4811969447146,3.57492912559016,16.6705472054441,254.092044114541,106.309127798745,18.9826542976358,13.4697269679054,10.9537342123779,12.7060620512706,12.8979265430025,16.7398550979052,102.972806355159,37.0572648129024,36.1922700672388,29.047644918008,32.1690743746548,97.9713155433101,93.5877755957426,102.956038272508,8.15571974098251,12.4530878744604,10.1436962105772,12.0154283428735,9.30971938404604,10.6606446233284,7.33543830641385,5.16635517928608,2.66897837330337,3.82531208157582,0,6.00642380577939,6.09332884850929,4.27238013531222,2.84004169943904,6.27060615356284,4.58326533206556,6.61701116136864,3.56697498905078,4.94210543738547,1.43768206527355,6.69853705803306,4.36852742360385,2.52578877947112,1.25578189465339,0.482443521363367,24.5721742921584,15.9172785887207,23.7928865605358,31.7423310399602,30.0403517809283,16.4156132292979,14.7587057349329,25.3673742215138,27.270879930371,27.9045508957456,26.4694915971429,18.5165545628784,22.4490476425664,29.5084079506284,30.1582567878545,11.4220193601929,8.35999264132362,6.62248191131358,4.33486592967038,5.15731421005694,3.11476396215683,9.08895337935743,8.51872192423893,8.19921363022941,10.1248996934415,10.9925647058174,12.6995244226965,13.8707500086528,11.334699646897,14.028281179743,16.602086673754,4.4984984299053,12.4907274983276,11.5742642383716,12.7051828295789,12.8676695918578,3.98235415019888,8.98288353773431,6.34879469625977,4.52652191414155,7.97315110778086,7.07100840271033,20.6742634534577,9.08834323693764,8.55593708123331,8.53299246426703,2.10837217149998,6.18813259489121,5.10659408630682,16.5656206508805,15.6524007377133,10.7168517515796,8.51233121482913,7.31312152168489,8.22745103010605,11.5696680663548,31.2113371724735,24.9961843619308,6.17479514553893,13.8504452470843,16.6308359496783,19.1795101271536,24.2325858326367,22.8155850645635,94.1483102314418,6.11903496634682,25.1180194772843,14.4470807574256,19.8158144285592,12.2439497053049,16.403307326523,23.5641518402718,36.8853193086666,34.0082029146489,37.5903928748033,5.72802370809068,16.6076396630096,13.0124458961183,12.6366248761507,17.7725051612298,23.1464317570948,26.4334118914249,24.9613436290515,12.0407733312654,13.4799572223465,6.21339313086926,0.56369293868419,18.0915020713214,21.1786867785085,22.9452402245976,23.5070878729471,18.0783054275133,19.0118726606121,11.9788034056434,5.87212328783981,4.1069300540421,3.45636007509439,55.6179572305594,20.4752467443066,21.3638790902841,16.2401028722244,25.2427640891149,27.6167083145958,34.0153122141512,31.4578692881849,30.5928343342887,36.7316808077099,35.9949480938521,41.6145150758743,45.6044129375162,59.8409739169633,8.61575457737803,1.33191572024439,4.75483440030221,4.19711540910196,26.2737847883779,25.9001816122631,11.721703953105,9.21784030039983,6.01886524842436,7.34177395402186,4.60325236507177,3.43737308063638,3.60891682921744,5.48066015816514,4.5323633843382,4.72515750162264,2.2516060161211,3.62513927187364,4.65984280576638,11.4166082342594,16.7590446828433,13.6586884603307,12.398442570483,8.59413966774727,9.37601893095072,14.446037307105,13.598313777767,8.3438994493872,9.8551912587881,11.4065684950608,11.8834595073228,13.2970940607233,12.4849047189495,14.2439963009921,10.0021675169445,13.0949288317687,15.2398284166327,9.89006161927936,11.6287146906174,13.3719008430312,12.9557338496316,12.3986818772607,14.5346416632329,12.6106569756543,13.1152642232099,10.6098224266208,12.6273461490165,10.7285249938231,15.1508413347589,13.1684870117833,14.1846454620811,17.187703813127,11.9301367713194,11.3814900478873,16.4874981439044,11.6965804222704,18.4789106481537,19.8939865351597,18.0884963678003,15.7670128221887
|phase1_expression=11.0502704502308,109.927253406399,89.6348501597386,293.995213390239,272.988172820759,22.6637017081051,22.8940387783615,50.0998494953316,19.42884365693,22.7042590532334,3.76679530096111,2.15384829287408,35.2673503658284,47.9063805256106,12.6581709489952,15.5905955890166,4.19737126876888,70.6635250402452,68.5572168028694,59.4145512517242,6.29320347117916,55.5036417212949,48.321960990703,42.877969308633,41.7524891542249,62.5912840885372,48.2453435698164,41.5859479083766,45.6056206695297,84.4300934695768,22.1730510655305,15.8757668364908,15.3766196896143,0,5.19932915552294,6.81562045969819,3.06254034393554,131.418932051389,64.8508335954754,77.4815141081221,120.587455046358,108.604232108393,93.2179877819815,5.16176953699867,5.27160042341476,1.46837401729345,14.0830441982647,8.93903141159831,10.9843091367236,6.9994763666742,11.6188729949051,11.5002051491977,56.7105208475149,26.8383992544197,55.1193830593641,54.2817410035848,56.1605542279963,29.3933092598142,8.9019242778223,8.99284664762456,10.1413024560989,13.8926258148344,14.2287167377782,16.6481447697059,27.6882581518753,27.7087244828979,14.081205194365,9.60545763303886,14.2054768862614,13.5005938331691,12.8298226424343,14.8538511889978,17.4486147351775,13.7189695120749,12.0765293482978,15.6267193723704,4.40463523997555,3.19218345212969,3.5329502648936,10.5509030184155,8.59983849862651,10.939180781692,3.90856198601933,2.25105044012672,3.51435969886663,11.490514833473,11.9592211871246,10.8111678578674,23.6265723199534,25.3164726357731,13.0439019915755,4.30211938490693,0,0.539703191637817,0,0,11.7973312910672,61.6957767732569,46.2419088193106,53.7076153255717,35.0700115243934,51.3305909657271,61.153257529595,49.7746692207332,2.16491041011214,2.02687892380079,2.02209778005913,20.2105467102736,42.7247508017833,5.04703272820404,13.3583701609925,10.0473607843007,11.5307748628029,7.08396410597326,9.64227398512779,3.89566433121994,44.4950941921873,14.8937337627509,23.8844849026466,13.9119490954772,18.7715290691335,16.9706338597328,11.1835056730873,2.63502717310392,2.72280718857492,83.2789999980008,34.626570982211,19.7967901227825,31.0051354058278,4.6435098215495,0.457500602818626,15.2041766056566,4.51943232499919,5.11430914660661,3.1168206683934,6.81413304884582,12.220723662038,18.9098595327341,2.0217820674694,5.05060454127538,12.8819238533077,14.0240283704418,18.0062129805349,15.3718914192429,16.1246502988647,13.9643955110486,11.6190138454064,6.46758426847539,16.1675994699632,13.0483195315795,15.8356011747554,17.535658594206,17.5169767012127,17.0643561595862,19.1377386859387,10.7478504081986,25.9818879305897,25.7347907114715,37.7937454196138,14.9130556225561,20.1692411583743,13.1445304866541,13.7311946639422,17.3152523937715,18.357786433598,18.6027155800326,15.2915838797783,23.9368951852697,19.7471819896177,17.5659186564632,15.2409361946209,13.8889988054066,9.00155472693308,12.4811969447146,3.57492912559016,16.6705472054441,254.092044114541,106.309127798745,18.9826542976358,13.4697269679054,10.9537342123779,12.7060620512706,12.8979265430025,16.7398550979052,102.972806355159,37.0572648129024,36.1922700672388,29.047644918008,32.1690743746548,97.9713155433101,93.5877755957426,102.956038272508,8.15571974098251,12.4530878744604,10.1436962105772,12.0154283428735,9.30971938404604,10.6606446233284,7.33543830641385,5.16635517928608,2.66897837330337,3.82531208157582,0,6.00642380577939,6.09332884850929,4.27238013531222,2.84004169943904,6.27060615356284,4.58326533206556,6.61701116136864,3.56697498905078,4.94210543738547,1.43768206527355,6.69853705803306,4.36852742360385,2.52578877947112,1.25578189465339,0.482443521363367,24.5721742921584,15.9172785887207,23.7928865605358,31.7423310399602,30.0403517809283,16.4156132292979,14.7587057349329,25.3673742215138,27.270879930371,27.9045508957456,26.4694915971429,18.5165545628784,22.4490476425664,29.5084079506284,30.1582567878545,11.4220193601929,8.35999264132362,6.62248191131358,4.33486592967038,5.15731421005694,3.11476396215683,9.08895337935743,8.51872192423893,8.19921363022941,10.1248996934415,10.9925647058174,12.6995244226965,13.8707500086528,11.334699646897,14.028281179743,16.602086673754,4.4984984299053,12.4907274983276,11.5742642383716,12.7051828295789,12.8676695918578,3.98235415019888,8.98288353773431,6.34879469625977,4.52652191414155,7.97315110778086,7.07100840271033,20.6742634534577,9.08834323693764,8.55593708123331,8.53299246426703,2.10837217149998,6.18813259489121,5.10659408630682,16.5656206508805,15.6524007377133,10.7168517515796,8.51233121482913,7.31312152168489,8.22745103010605,11.5696680663548,31.2113371724735,24.9961843619308,6.17479514553893,13.8504452470843,16.6308359496783,19.1795101271536,24.2325858326367,22.8155850645635,94.1483102314418,6.11903496634682,25.1180194772843,14.4470807574256,19.8158144285592,12.2439497053049,16.403307326523,23.5641518402718,36.8853193086666,34.0082029146489,37.5903928748033,5.72802370809068,16.6076396630096,13.0124458961183,12.6366248761507,17.7725051612298,23.1464317570948,26.4334118914249,24.9613436290515,12.0407733312654,13.4799572223465,6.21339313086926,0.56369293868419,18.0915020713214,21.1786867785085,22.9452402245976,23.5070878729471,18.0783054275133,19.0118726606121,11.9788034056434,5.87212328783981,4.1069300540421,3.45636007509439,55.6179572305594,20.4752467443066,21.3638790902841,16.2401028722244,25.2427640891149,27.6167083145958,34.0153122141512,31.4578692881849,30.5928343342887,36.7316808077099,35.9949480938521,41.6145150758743,45.6044129375162,59.8409739169633,8.61575457737803,1.33191572024439,4.75483440030221,4.19711540910196,26.2737847883779,25.9001816122631,11.721703953105,9.21784030039983,6.01886524842436,7.34177395402186,4.60325236507177,3.43737308063638,3.60891682921744,5.48066015816514,4.5323633843382,4.72515750162264,2.2516060161211,3.62513927187364,4.65984280576638,11.4166082342594,16.7590446828433,13.6586884603307,12.398442570483,8.59413966774727,9.37601893095072,14.446037307105,13.598313777767,8.3438994493872,9.8551912587881,11.4065684950608,11.8834595073228,13.2970940607233,12.4849047189495,14.2439963009921,10.0021675169445,13.0949288317687,15.2398284166327,9.89006161927936,11.6287146906174,13.3719008430312,12.9557338496316,12.3986818772607,14.5346416632329,12.6106569756543,13.1152642232099,10.6098224266208,12.6273461490165,10.7285249938231,15.1508413347589,13.1684870117833,14.1846454620811,17.187703813127,11.9301367713194,11.3814900478873,16.4874981439044,11.6965804222704,18.4789106481537,19.8939865351597,18.0884963678003,15.7670128221887
|short_description=p1@Mical1
}}
}}

Revision as of 15:09, 17 April 2012

Short description:p1@Mical1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mical1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000099934, ENSMUST00000126436, ENSMUST00000134010_5end
EntrezGene:Mical1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mical1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5109.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I689.63
CD326+ enterocyte, pool1.CNhs13542.11848-124I3294.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4272.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E950.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E847.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A270.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A468.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A659.41
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H255.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I948.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D142.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.75
GP2+ M cell, pool1.CNhs13228.11845-124H962.59
GP2+ M cell, pool2.CNhs13231.11846-124I148.25
GP2+ M cell, pool3.CNhs13240.11847-124I241.59
Ileum epithelium, pool1.CNhs13199.10252-104B945.61
Ileum epithelium, pool2.CNhs13232.10253-104C184.43
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8131.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H164.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H377.48
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9120.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2108.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H493.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A256.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A155.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C154.28
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E156.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.39
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D923.63
Mouse Schwann, donor2.CNhs12573.11746-123F925.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I761.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I853.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G635.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I861.15
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.21
accessory axillary lymph node, adult.CNhs10475.1063-29H942.72
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C513.36
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A844.50
aorta, adult.CNhs10498.46-23H114.89
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F513.91
bone (os femoris), neonate N16.CNhs11225.1525-43A618.77
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H783.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.01
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.91
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C612.88
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C918.01
eyeball, embryo E17.CNhs11023.1261-18D415.37
eyeball, neonate N00.CNhs11207.633-15C616.12
eyeball, neonate N01.CNhs11140.1532-43E713.96
eyeball, neonate N02.CNhs11205.1551-44G811.62
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E215.84
forelimb, embryo E14.CNhs10577.413-26A817.54
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D537.79
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D413.73
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C618.36
heart, embryo E17.CNhs11025.479-18E518.60
heart, embryo E18.CNhs11030.1283-20G315.29
heart, neonate N00.CNhs11213.639-21E323.94
heart, neonate N03.CNhs11221.1349-25I219.75
heart, neonate N10.CNhs11118.749-24G117.57
heart, neonate N16.CNhs11209.782-15G115.24
heart, neonate N20.CNhs11127.821-26I613.89
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D212.48
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G116.67
intestinal mucosa, adult.CNhs10506.860-29I3254.09
intestine, adult.CNhs10496.178-9A3106.31
intestine, embryo E12.CNhs11019.1251-16I518.98
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D810.95
intestine, embryo E16.CNhs10585.463-22H412.71
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F716.74
intestine, neonate N00.CNhs11126.644-26D1102.97
intestine, neonate N01.CNhs11192.1322-23E937.06
intestine, neonate N06.CNhs11102.688-20B836.19
intestine, neonate N07.CNhs11095.720-20F229.05
intestine, neonate N10.CNhs11098.755-23A532.17
intestine, neonate N20.CNhs11187.827-18D197.97
intestine, neonate N25.CNhs11121.1352-25E393.59
intestine, neonate N30.CNhs11131.1384-42G1102.96
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F812.45
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G710.66
kidney, neonate N10.CNhs11206.758-6D57.34
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B124.57
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F823.79
lung, embryo E15.CNhs11020.432-17C531.74
lung, embryo E16.CNhs10998.458-17B630.04
lung, embryo E17.CNhs10605.480-44A616.42
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C625.37
lung, neonate N06.CNhs11212.683-20E527.27
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E626.47
lung, neonate N20.CNhs11109.822-18A418.52
lung, neonate N25.CNhs11119.1359-25C722.45
lung, neonate N30.CNhs11133.1394-42H229.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.12
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I712.49
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I412.71
oviduct, adult pregnant day01.CNhs10500.988-6G612.87
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E616.57
pituitary gland, embryo E13.CNhs11009.370-44C715.65
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B98.51
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G325.00
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C313.85
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H319.18
skin, neonate N06.CNhs11097.693-20I524.23
skin, neonate N10.CNhs11108.762-6C422.82
small intestine, neonate N16.CNhs11114.790-21I194.15
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G225.12
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F219.82
spleen, neonate N10.CNhs11116.752-24D112.24
spleen, neonate N20.CNhs11112.824-19H116.40
spleen, neonate N25.CNhs11099.1354-25G323.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D337.59
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E316.61
stomach, embryo E15.CNhs10603.1252-16G813.01
stomach, embryo E16.CNhs11022.459-17D412.64
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C623.15
stomach, neonate N03.CNhs11193.1340-24B826.43
stomach, neonate N07.CNhs11210.718-18A924.96
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F518.09
testis, embryo E15.CNhs11034.443-27C521.18
testis, embryo E16.CNhs11033.470-26G522.95
testis, embryo E17.CNhs11029.486-18I523.51
testis, embryo E18.CNhs11027.503-18G518.08
testis, neonate N00.CNhs11189.1300-22B719.01
testis, neonate N07.CNhs11222.726-26I411.98
testis, neonate N10.CNhs11204.763-44D95.87
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B555.62
thymus, embryo E14.CNhs11041.402-44I420.48
thymus, embryo E15.CNhs11005.430-45I221.36
thymus, embryo E16.CNhs11002.456-26C516.24
thymus, embryo E17.CNhs10581.478-18C125.24
thymus, embryo E18.CNhs10595.1273-19G427.62
thymus, neonate N02.CNhs11181.1541-43F834.02
thymus, neonate N03.CNhs11137.2104-43C731.46
thymus, neonate N06.CNhs11197.681-26C430.59
thymus, neonate N07.CNhs11211.713-19D336.73
thymus, neonate N10.CNhs11194.748-24E435.99
thymus, neonate N20.CNhs11186.820-7A241.61
thymus, neonate N25.CNhs11125.1362-25G745.60
thymus, neonate N30.CNhs11132.1393-42G259.84
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E426.27
uterus, adult pregnant day19.CNhs10497.590-15F525.90
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I811.42
whole body, embryo E12.CNhs10587.857-27C916.76
whole body, embryo E13.CNhs10512.372-23H213.66
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I516.49
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C218.48
whole body, neonate N01.CNhs10576.659-23C619.89
whole body, neonate N06.CNhs10515.692-21D118.09
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:41196132..41196198,%2B&oldid=734960"