Personal tools

FFCP PHASE1:Mm9::chr11:70513607..70513672,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:70513607..70513672,-
|short_description=p1@Inca1
|description=CAGE_peak_1_at_Inca1_5end
|association_with_transcript=0bp_to_ENSMUST00000073625,ENSMUST00000108541,ENSMUST00000108542,ENSMUST00000108543,ENSMUST00000127985,ENSMUST00000152446,NM_001252482,NM_001252483,NM_001252484,NM_001252485,NM_213729,uc007jwg.1,uc007jwh.1,uc007jwi.1,uc007jwj.1_5end
|EntrezGene=103844
|EntrezGene=103844
|HGNC=
|HGNC=
|UniProt=Q6PKN7,Q5SX65,Q5SX64
|UniProt=Q6PKN7,Q5SX65,Q5SX64
|association_with_transcript=0bp_to_ENSMUST00000073625,ENSMUST00000108541,ENSMUST00000108542,ENSMUST00000108543,ENSMUST00000127985,ENSMUST00000152446,NM_001252482,NM_001252483,NM_001252484,NM_001252485,NM_213729,uc007jwg.1,uc007jwh.1,uc007jwi.1,uc007jwj.1_5end
|description=CAGE_peak_1_at_Inca1_5end
|id=chr11:70513607..70513672,-
|ontology_enrichment_disease=
|phase1_expression=2.40223270657191,1.39590163055744,2.27499619694768,5.44435580352294,6.01074875935617,2.35030980676646,2.33612640595526,2.45334314538995,1.54867594366833,1.17032263160997,0.856089841127525,0.717949430958028,1.88320802924326,1.57356724354195,0,0.202475267389826,0,2.05050407482854,2.19383093769182,1.69755860719212,9.86502165752409,0.297872853602656,0,1.11994695955385,1.14704640533585,1.14846392823004,0.86152399231815,1.72376986148711,1.90023419456374,1.00812051903972,1.10865255327652,2.54012269383853,2.46025915033828,0,2.02196133825892,0.997407872150954,3.47087905646027,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,5.16176953699867,7.40051597902456,4.77221555620372,5.47673941043627,5.01457859675027,8.34807494390993,4.86074747685709,5.17949760013841,8.62515386189829,3.35565212115473,3.62681071005672,3.6970317905671,1.28629718017973,2.29226751951005,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,0,2.66788438833342,0.899899717281399,0.988866362566974,0,3.89480143673926,10.7581125490035,0.518448061542388,0.675029691658453,0.210324961351382,2.57085885963423,2.20868540951614,0.244981598429908,0.191690942036473,0,4.40463523997555,4.21368215681119,3.5329502648936,0.527545150920775,0.823388792421687,1.04182674111352,2.51264699101243,3.37657566019008,3.81995619442025,1.76777151284201,2.13557521198654,0.559198337475902,0.757261933331841,1.20914496170857,5.79728977403356,32.6961073252927,15.6393406752783,51.8115063972304,73.4247351715866,74.3724632581577,10.9546647702766,1.36344258062446,3.37721805983729,1.7666978725517,2.53518155598025,5.13305909657271,5.09610479413291,7.11066703153331,1.08245520505607,0.253359865475099,1.51657333504435,20.3247305899927,10.0985774622397,8.90652834388949,2.08182392119363,5.48037860961854,5.30415643688935,10.0984169170257,12.2292255421133,11.8126595849895,7.41584903203122,61.5993260478824,0,1.94120219936891,0.883366073841574,3.87900202508178,5.59175283654366,6.73395833126558,5.44561437714983,1.78819938646014,0.239630249011841,0,0.381210681219194,5.09288173976397,5.03250663100489,1.13088916901578,4.51943232499919,4.34716277461562,4.98691306942944,4.86723789203273,3.56437773476107,6.34475550111474,19.7123751578266,3.36706969418358,1.43132487258974,1.60931473103431,1.44049703844279,3.31550599238573,3.81004395247436,2.8185018462667,1.68663104207512,5.69147415625834,1.07783996466421,1.70195472151037,1.58356011747554,1.09597866213787,0,2.089512999133,2.67516777330327,0.796137067273973,0,0.51469581422943,0.568326998791185,1.44988040774851,0.938104239924385,0.36012412292203,2.13070262026689,1.37734962223183,1.54267112887378,1.16266972375204,0,2.56883753207773,2.13927804887525,2.46251196118643,3.89130285820108,3.21639972335731,3.29325172936576,2.28150911892632,10.3042074796422,2.16099685996497,3.30418782983798,1.58670339998127,1.06644125267617,0.696710015581316,2.19074684247559,1.61346819698674,3.11329261382818,2.66315876557583,2.84717436926707,4.28217282282428,6.03204501120647,5.37182474511107,4.28920991662064,3.59527763461689,2.16138049874694,2.38969527905241,1.70701110857774,1.48523066392647,0,2.24016460629846,2.13347735884388,3.57692681440625,4.11037491307672,5.31396532726568,3.45397201251025,6.16985819609003,25.1984733024077,0.83422552858047,1.96558995113203,2.9232074610031,2.23146133527353,5.06472035480075,3.8193877767213,5.4662266115654,32.4270453550071,25.8087728396797,60.3826467414889,42.4240680342094,49.3019523521006,59.6086151955184,56.8689800864462,69.4718670763249,2.40179147216586,1.51593129416388,0.977789858652155,1.18821560042632,1.87752198630802,2.68010011906905,4.28478553594825,5.07347484430277,3.4679731703362,4.4292937929755,2.55127629851979,4.26044618260919,2.59027472798843,5.20736610893442,3.01582567878545,2.71952841909355,3.44234991113325,5.79467167239938,7.06422595946285,6.32943107597897,2.13115428989678,8.33154059774431,1.26203287766503,1.56175497718655,2.80050417052639,2.38968797952552,2.00518806674155,3.67999490025482,1.21443210502468,2.04579100537918,2.37172666767914,5.14114106274891,6.81312408999689,3.5613120733451,4.88660878060728,4.45419332025846,3.98235415019888,1.45668381692989,1.51161778482376,1.69744571780308,2.06711325016541,1.22974059177571,4.65170927702798,4.36240475373007,1.78248689192361,5.37262488490887,3.16255825724996,4.12542172992747,6.46835250932197,1.44048875225048,3.49268446213437,3.64372959553707,2.48276327099183,3.38900753443934,2.79733335023606,3.65357938937519,3.75474732901937,6.56679419677843,3.30792597082443,13.6855589941428,9.84933002845024,4.94565984410878,3.9392873521035,4.10352249362653,3.49777003955821,4.82105785227325,0.683483523191411,2.27025554759545,0.925972636848558,0.188368457004691,0.683471138605126,1.37266903923914,1.35982743995084,1.11961161858926,0.967399816630967,2.86401185404534,2.21435195506795,1.82987520414164,2.37611749807963,0.418176592028937,1.52853794622324,3.10187996685088,7.3561575595549,2.87931536182433,5.4438288782553,4.97071450469541,29.3120328115779,2.69129782879162,2.31641886639937,2.52786544847262,1.16243841129958,3.54807863530634,3.63807439801837,5.7289929331338,20.0281347853108,35.2712816405969,20.7381604505663,2.52808896502543,1.01362607645082,0.616265742988964,1.16928740680016,0.537080087002444,0.993406773906324,0.721172697119813,1.18151621739662,1.81739609906666,2.362411006305,0.907435666231565,0.877120926657772,0.769694733122636,2.33753804363138,2.0405734525369,3.32978930061097,3.05027112472217,3.8613461763738,7.14801497919105,2.064507229963,2.93042598827624,1.50057865355346,3.51100472824754,3.3885110557024,1.84130094602871,2.29158205375759,2.23409137046794,4.11049511862385,5.2877572817279,4.05013500139084,3.15224842256954,3.62513927187364,2.5888015587591,0.93408612825759,1.99512436700516,1.53660245178721,2.67417388775123,2.51535795153579,1.83843508450014,4.22268782823069,3.09052585858341,4.1719497246936,5.81203587056734,4.05566879824384,4.14977951049368,3.183811253976,5.25006249719928,5.05432126809397,3.33405583898152,4.51948871184936,4.62982129112892,4.94503080963968,4.26876868389752,2.40008476669791,5.50174999093946,3.81497903915713,5.81385666529314,4.14081273827455,4.48457421825885,4.39027134894654,6.05060336307039,4.6173398707593,3.92799590160417,4.38949567059444,4.62971067165148,3.27384834535751,5.26785260032284,5.01557188550968,0.999242311751784,5.38042699424439,6.23126056740065,10.7121465958552,8.6030653456611,6.95603506861264
|phase1_expression=2.40223270657191,1.39590163055744,2.27499619694768,5.44435580352294,6.01074875935617,2.35030980676646,2.33612640595526,2.45334314538995,1.54867594366833,1.17032263160997,0.856089841127525,0.717949430958028,1.88320802924326,1.57356724354195,0,0.202475267389826,0,2.05050407482854,2.19383093769182,1.69755860719212,9.86502165752409,0.297872853602656,0,1.11994695955385,1.14704640533585,1.14846392823004,0.86152399231815,1.72376986148711,1.90023419456374,1.00812051903972,1.10865255327652,2.54012269383853,2.46025915033828,0,2.02196133825892,0.997407872150954,3.47087905646027,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,5.16176953699867,7.40051597902456,4.77221555620372,5.47673941043627,5.01457859675027,8.34807494390993,4.86074747685709,5.17949760013841,8.62515386189829,3.35565212115473,3.62681071005672,3.6970317905671,1.28629718017973,2.29226751951005,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,0,2.66788438833342,0.899899717281399,0.988866362566974,0,3.89480143673926,10.7581125490035,0.518448061542388,0.675029691658453,0.210324961351382,2.57085885963423,2.20868540951614,0.244981598429908,0.191690942036473,0,4.40463523997555,4.21368215681119,3.5329502648936,0.527545150920775,0.823388792421687,1.04182674111352,2.51264699101243,3.37657566019008,3.81995619442025,1.76777151284201,2.13557521198654,0.559198337475902,0.757261933331841,1.20914496170857,5.79728977403356,32.6961073252927,15.6393406752783,51.8115063972304,73.4247351715866,74.3724632581577,10.9546647702766,1.36344258062446,3.37721805983729,1.7666978725517,2.53518155598025,5.13305909657271,5.09610479413291,7.11066703153331,1.08245520505607,0.253359865475099,1.51657333504435,20.3247305899927,10.0985774622397,8.90652834388949,2.08182392119363,5.48037860961854,5.30415643688935,10.0984169170257,12.2292255421133,11.8126595849895,7.41584903203122,61.5993260478824,0,1.94120219936891,0.883366073841574,3.87900202508178,5.59175283654366,6.73395833126558,5.44561437714983,1.78819938646014,0.239630249011841,0,0.381210681219194,5.09288173976397,5.03250663100489,1.13088916901578,4.51943232499919,4.34716277461562,4.98691306942944,4.86723789203273,3.56437773476107,6.34475550111474,19.7123751578266,3.36706969418358,1.43132487258974,1.60931473103431,1.44049703844279,3.31550599238573,3.81004395247436,2.8185018462667,1.68663104207512,5.69147415625834,1.07783996466421,1.70195472151037,1.58356011747554,1.09597866213787,0,2.089512999133,2.67516777330327,0.796137067273973,0,0.51469581422943,0.568326998791185,1.44988040774851,0.938104239924385,0.36012412292203,2.13070262026689,1.37734962223183,1.54267112887378,1.16266972375204,0,2.56883753207773,2.13927804887525,2.46251196118643,3.89130285820108,3.21639972335731,3.29325172936576,2.28150911892632,10.3042074796422,2.16099685996497,3.30418782983798,1.58670339998127,1.06644125267617,0.696710015581316,2.19074684247559,1.61346819698674,3.11329261382818,2.66315876557583,2.84717436926707,4.28217282282428,6.03204501120647,5.37182474511107,4.28920991662064,3.59527763461689,2.16138049874694,2.38969527905241,1.70701110857774,1.48523066392647,0,2.24016460629846,2.13347735884388,3.57692681440625,4.11037491307672,5.31396532726568,3.45397201251025,6.16985819609003,25.1984733024077,0.83422552858047,1.96558995113203,2.9232074610031,2.23146133527353,5.06472035480075,3.8193877767213,5.4662266115654,32.4270453550071,25.8087728396797,60.3826467414889,42.4240680342094,49.3019523521006,59.6086151955184,56.8689800864462,69.4718670763249,2.40179147216586,1.51593129416388,0.977789858652155,1.18821560042632,1.87752198630802,2.68010011906905,4.28478553594825,5.07347484430277,3.4679731703362,4.4292937929755,2.55127629851979,4.26044618260919,2.59027472798843,5.20736610893442,3.01582567878545,2.71952841909355,3.44234991113325,5.79467167239938,7.06422595946285,6.32943107597897,2.13115428989678,8.33154059774431,1.26203287766503,1.56175497718655,2.80050417052639,2.38968797952552,2.00518806674155,3.67999490025482,1.21443210502468,2.04579100537918,2.37172666767914,5.14114106274891,6.81312408999689,3.5613120733451,4.88660878060728,4.45419332025846,3.98235415019888,1.45668381692989,1.51161778482376,1.69744571780308,2.06711325016541,1.22974059177571,4.65170927702798,4.36240475373007,1.78248689192361,5.37262488490887,3.16255825724996,4.12542172992747,6.46835250932197,1.44048875225048,3.49268446213437,3.64372959553707,2.48276327099183,3.38900753443934,2.79733335023606,3.65357938937519,3.75474732901937,6.56679419677843,3.30792597082443,13.6855589941428,9.84933002845024,4.94565984410878,3.9392873521035,4.10352249362653,3.49777003955821,4.82105785227325,0.683483523191411,2.27025554759545,0.925972636848558,0.188368457004691,0.683471138605126,1.37266903923914,1.35982743995084,1.11961161858926,0.967399816630967,2.86401185404534,2.21435195506795,1.82987520414164,2.37611749807963,0.418176592028937,1.52853794622324,3.10187996685088,7.3561575595549,2.87931536182433,5.4438288782553,4.97071450469541,29.3120328115779,2.69129782879162,2.31641886639937,2.52786544847262,1.16243841129958,3.54807863530634,3.63807439801837,5.7289929331338,20.0281347853108,35.2712816405969,20.7381604505663,2.52808896502543,1.01362607645082,0.616265742988964,1.16928740680016,0.537080087002444,0.993406773906324,0.721172697119813,1.18151621739662,1.81739609906666,2.362411006305,0.907435666231565,0.877120926657772,0.769694733122636,2.33753804363138,2.0405734525369,3.32978930061097,3.05027112472217,3.8613461763738,7.14801497919105,2.064507229963,2.93042598827624,1.50057865355346,3.51100472824754,3.3885110557024,1.84130094602871,2.29158205375759,2.23409137046794,4.11049511862385,5.2877572817279,4.05013500139084,3.15224842256954,3.62513927187364,2.5888015587591,0.93408612825759,1.99512436700516,1.53660245178721,2.67417388775123,2.51535795153579,1.83843508450014,4.22268782823069,3.09052585858341,4.1719497246936,5.81203587056734,4.05566879824384,4.14977951049368,3.183811253976,5.25006249719928,5.05432126809397,3.33405583898152,4.51948871184936,4.62982129112892,4.94503080963968,4.26876868389752,2.40008476669791,5.50174999093946,3.81497903915713,5.81385666529314,4.14081273827455,4.48457421825885,4.39027134894654,6.05060336307039,4.6173398707593,3.92799590160417,4.38949567059444,4.62971067165148,3.27384834535751,5.26785260032284,5.01557188550968,0.999242311751784,5.38042699424439,6.23126056740065,10.7121465958552,8.6030653456611,6.95603506861264
|short_description=p1@Inca1
}}
}}

Revision as of 17:30, 17 April 2012

Short description:p1@Inca1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Inca1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000073625, ENSMUST00000108541, ENSMUST00000108542, ENSMUST00000108543, ENSMUST00000127985, ENSMUST00000152446, NM_001252482, NM_001252483, NM_001252484, NM_001252485, NM_213729, uc007jwg.1, uc007jwh.1, uc007jwi.1, uc007jwj.1_5end
EntrezGene:Inca1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Inca1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C851.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F473.42
Mouse hepatocyte, donor8.CNhs13091.11824-124F674.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.32
accessory axillary lymph node, adult.CNhs10475.1063-29H910.10
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C112.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H161.60
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D54.11
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H16.17
liver, adult pregnant day01.CNhs10466.508-5B225.20
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F432.43
liver, neonate N03.CNhs11123.1345-25G225.81
liver, neonate N06.CNhs11101.684-20A860.38
liver, neonate N07.CNhs11103.716-20H242.42
liver, neonate N10.CNhs11115.751-24B949.30
liver, neonate N20.CNhs11220.823-25A359.61
liver, neonate N25.CNhs11198.1368-26H156.87
liver, neonate N30.CNhs11106.1382-42D169.47
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C313.69
skin, neonate N00.CNhs11124.650-25G49.85
skin, neonate N03.CNhs11215.662-22H34.95
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A97.36
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G529.31
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H335.27
testis, neonate N30.CNhs11130.1391-42E220.74
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:70513607..70513672,-&oldid=744260"