Personal tools

FFCP PHASE1:Mm9::chr13:24853744..24853819,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:24853744..24853819,-
|short_description=p1@Gmnn
|description=CAGE_peak_1_at_Gmnn_5end
|association_with_transcript=0bp_to_ENSMUST00000110382,NM_020567,uc007pwh.1_5end
|EntrezGene=57441
|EntrezGene=57441
|HGNC=
|HGNC=
|UniProt=O88513,Q3V295
|UniProt=O88513,Q3V295
|association_with_transcript=0bp_to_ENSMUST00000110382,NM_020567,uc007pwh.1_5end
|description=CAGE_peak_1_at_Gmnn_5end
|id=chr13:24853744..24853819,-
|ontology_enrichment_disease=
|phase1_expression=5.44506080156299,18.8446720125255,18.1999695755814,25.4069937497737,16.0286633582831,22.3279431642813,27.099066309081,10.0716192284429,5.77233760821834,4.21316147379588,1.88339765048055,1.51567102091139,9.0736386863539,10.9275503023747,97.6011602119892,93.1386229993199,173.49134577578,14.8267217718372,13.1629856261509,26.7365480632759,16.4983982893075,54.7093141116878,62.1655498150666,25.9187724925319,25.0056116363215,17.8011908875656,23.26114779259,20.6852383378453,28.3134894989997,32.763916868791,33.0378460876404,49.5323925298512,69.5023209970564,0,47.0828140194578,62.3379920094346,59.8216213848741,36.412251874111,93.760241342856,72.769800412358,24.7057224973026,34.8353197328807,32.0436833000561,5.16176953699867,5.5757312170733,7.34187008646726,2.34717403304412,9.81113203712009,5.27246838562732,5.24960727500565,12.0388322597812,4.31257693094915,10.7380867876951,13.0565185562042,10.4189077734164,16.4646039063006,8.88253663810146,3.6097046459421,3.43937983461316,2.64495489636016,1.90149421051854,5.08266798103698,9.78224275722253,3.1496490104849,7.9109309005358,4.2628806896766,4.19440154725767,2.68952813725088,14.4128561108784,9.99043943654511,14.5124223332454,5.14171771926846,4.8591079009355,16.7812394924487,17.9231030804102,17.4651569455904,8.8092704799511,4.34136949489638,4.76180253094355,2.37395317914349,2.37867873366265,2.6045668527838,5.02529398202486,5.6276261003168,4.43114918552749,7.95497180778903,5.41012387036591,5.03278503728312,5.45228591998925,10.3533037346296,5.2175607966302,12.9063581547208,8.83962733820076,11.3337670243942,12.9955283489534,26.8816132258401,15.870219474888,21.9855116125695,29.3558185201242,25.4404493647445,9.85903938436764,12.8326477414318,2.54805239706646,0,41.5662798741531,43.3245369962419,40.9474800461974,19.8679950711164,6.99132285847364,4.30482203287992,36.9523746011869,19.1813251336649,25.3677046981664,27.1300752994721,15.6392980490487,12.8179923156269,8.65182387070309,8.53136205827479,57.4996858767418,20.7061567932684,41.518205470554,44.6085232884404,26.0948465705371,2.34224637609238,3.35114730901528,20.9474785271045,64.8199823577029,95.9844369589452,66.5847989862859,2.39665023047716,0.915001205637253,3.76963056338593,3.82413504423008,8.18289463457058,4.77912502486988,4.86723789203273,18.8402823123085,28.2403823284911,5.30717792710717,8.20723237957248,42.2891439628787,37.933847231523,36.1924880908752,30.2916683849787,29.3237311342223,26.9038812598185,19.4899587084236,5.17406741478031,38.1555347491131,32.5262457888649,24.8091085071168,20.3852031157645,24.7462051810782,12.8853301613202,15.2278780941878,38.8116820296062,75.8390242298294,88.7850279545767,71.6092018476893,39.7681483268164,39.4003780768242,50.2373151476231,31.2503050972478,40.3366675082178,48.7484076724115,40.2283724418206,43.1920176253387,37.3649095574942,44.9248390263802,19.2075932972541,16.3758995282629,16.9591985413385,20.8572609526498,26.4386644957932,1.26173969138476,5.76265829323993,19.1642894130603,29.3540128996534,48.6297211220333,44.5894409972042,26.9332994163175,17.9498336914775,24.4615848229357,19.2127882373685,32.2679761850268,16.3051965176771,18.0961350336194,15.7175612912509,19.1064805376738,26.0657628509724,35.8789162791992,26.6849306160852,32.62287896393,41.3579615647218,37.1935527721165,27.2892779312721,23.856155921618,16.3416460344442,15.9356073553128,17.4179974615931,17.583857518234,16.7820142933649,13.6368208460088,68.5733384493147,50.5156617440932,68.5829442773804,59.8437358096084,53.782506624789,49.6520410973769,37.4004978686054,41.6687532811841,53.814036984864,30.1913233707445,27.5384301274693,24.6509761760503,22.7320990152401,20.9894973820637,24.1221760681684,8.12914036733061,37.519299530556,37.3189796052239,40.7388205860452,38.4892007193143,17.5881570313907,11.9021820443007,6.43941037930736,16.8669604193624,13.0664166892777,9.08892181347676,8.1931657357869,11.569893785015,10.7040303350319,42.2215595029962,36.9855864996723,13.277635371514,7.17435540392304,3.69266356971921,6.21221938938677,16.2295595922909,5.80683132570058,36.5989534522858,30.4542220551378,28.4358885007295,26.2865677747807,17.3782965784267,15.286132662597,29.1463705205924,16.6585839009448,21.7408277870588,4.81981974632711,6.67118400478862,14.4233138970477,19.8722090411363,5.93892442701128,2.65490276679926,42.0010500548118,45.9531806586422,33.9489143560617,13.8791889653963,15.6791925451403,10.3371317267288,22.1755574981278,22.4593348382374,9.7971394960103,3.16255825724996,4.12542172992747,6.46835250932197,38.7131352167317,16.5579115241926,14.5749183821483,15.4286003268778,10.167022603318,11.5184314421485,6.39376393140658,34.027397669238,14.4045808187398,5.51320995137405,8.90385765883992,12.1098320021929,22.7982856228429,20.0545537925269,14.2802582778203,27.1077178065761,3.15223013417866,57.5834868288764,38.5943443091226,52.9656348277375,123.569707795077,104.571084206584,83.0464768739677,30.9360742588817,27.8503390124079,32.2005938964307,34.3681422485441,34.1642873067626,28.0580864635051,31.4295541791442,25.5087721137652,20.9628061196331,22.5223458462651,15.5388496763632,14.1348208671376,22.2937754061884,4.97071450469541,51.8597503589455,35.7344545045109,38.2209112955896,28.389873498231,24.2820468138134,28.0467168314692,28.165737274981,35.6760014472423,32.7161154608218,60.3960302065015,33.4114807259124,33.4971787865869,36.4905387522296,45.7063759383481,59.8934993927635,64.4496104402933,45.4980302449097,55.0495158801457,64.983391956814,69.3639511143774,65.5378537232999,56.7651422320412,43.4662148099296,46.3741076706388,32.258025002113,5.21479882314986,93.9000582772294,103.260648957507,80.9203850874858,2.12508553435409,8.25802891985201,4.94509385521616,10.0753138167161,5.01572104035363,3.3885110557024,0.460325236507177,3.43737308063638,2.92150409984269,0.685082519770642,4.5323633843382,4.05013500139084,2.70192721934532,2.71885445390523,3.62432218226274,55.9413803478712,29.1288157582753,25.0978400458577,26.498632160444,30.8131349063134,18.5681943534514,18.4464784075341,14.4224540067226,14.1204452220399,12.6348605881899,17.7435509923168,15.2787336522722,18.6346599865066,18.2471684353877,19.3557530380417,18.5754539600399,18.8891451290114,20.255468148689,20.192209139362,20.3134509785468,15.7719856097291,20.4097177083238,19.313331385733,19.1857269954674,19.3865323655581,19.7998182466523,21.7684287718599,23.1501346065302,16.9755142307327,14.5896990631012,19.100237917992,17.9278157923526,19.6430900721451,19.5220419894317,13.3105561576988,5.74564329257276,14.9716229405061,10.3138105943183,7.07766828654721,12.1325280515734,16.2307484934295
|phase1_expression=5.44506080156299,18.8446720125255,18.1999695755814,25.4069937497737,16.0286633582831,22.3279431642813,27.099066309081,10.0716192284429,5.77233760821834,4.21316147379588,1.88339765048055,1.51567102091139,9.0736386863539,10.9275503023747,97.6011602119892,93.1386229993199,173.49134577578,14.8267217718372,13.1629856261509,26.7365480632759,16.4983982893075,54.7093141116878,62.1655498150666,25.9187724925319,25.0056116363215,17.8011908875656,23.26114779259,20.6852383378453,28.3134894989997,32.763916868791,33.0378460876404,49.5323925298512,69.5023209970564,0,47.0828140194578,62.3379920094346,59.8216213848741,36.412251874111,93.760241342856,72.769800412358,24.7057224973026,34.8353197328807,32.0436833000561,5.16176953699867,5.5757312170733,7.34187008646726,2.34717403304412,9.81113203712009,5.27246838562732,5.24960727500565,12.0388322597812,4.31257693094915,10.7380867876951,13.0565185562042,10.4189077734164,16.4646039063006,8.88253663810146,3.6097046459421,3.43937983461316,2.64495489636016,1.90149421051854,5.08266798103698,9.78224275722253,3.1496490104849,7.9109309005358,4.2628806896766,4.19440154725767,2.68952813725088,14.4128561108784,9.99043943654511,14.5124223332454,5.14171771926846,4.8591079009355,16.7812394924487,17.9231030804102,17.4651569455904,8.8092704799511,4.34136949489638,4.76180253094355,2.37395317914349,2.37867873366265,2.6045668527838,5.02529398202486,5.6276261003168,4.43114918552749,7.95497180778903,5.41012387036591,5.03278503728312,5.45228591998925,10.3533037346296,5.2175607966302,12.9063581547208,8.83962733820076,11.3337670243942,12.9955283489534,26.8816132258401,15.870219474888,21.9855116125695,29.3558185201242,25.4404493647445,9.85903938436764,12.8326477414318,2.54805239706646,0,41.5662798741531,43.3245369962419,40.9474800461974,19.8679950711164,6.99132285847364,4.30482203287992,36.9523746011869,19.1813251336649,25.3677046981664,27.1300752994721,15.6392980490487,12.8179923156269,8.65182387070309,8.53136205827479,57.4996858767418,20.7061567932684,41.518205470554,44.6085232884404,26.0948465705371,2.34224637609238,3.35114730901528,20.9474785271045,64.8199823577029,95.9844369589452,66.5847989862859,2.39665023047716,0.915001205637253,3.76963056338593,3.82413504423008,8.18289463457058,4.77912502486988,4.86723789203273,18.8402823123085,28.2403823284911,5.30717792710717,8.20723237957248,42.2891439628787,37.933847231523,36.1924880908752,30.2916683849787,29.3237311342223,26.9038812598185,19.4899587084236,5.17406741478031,38.1555347491131,32.5262457888649,24.8091085071168,20.3852031157645,24.7462051810782,12.8853301613202,15.2278780941878,38.8116820296062,75.8390242298294,88.7850279545767,71.6092018476893,39.7681483268164,39.4003780768242,50.2373151476231,31.2503050972478,40.3366675082178,48.7484076724115,40.2283724418206,43.1920176253387,37.3649095574942,44.9248390263802,19.2075932972541,16.3758995282629,16.9591985413385,20.8572609526498,26.4386644957932,1.26173969138476,5.76265829323993,19.1642894130603,29.3540128996534,48.6297211220333,44.5894409972042,26.9332994163175,17.9498336914775,24.4615848229357,19.2127882373685,32.2679761850268,16.3051965176771,18.0961350336194,15.7175612912509,19.1064805376738,26.0657628509724,35.8789162791992,26.6849306160852,32.62287896393,41.3579615647218,37.1935527721165,27.2892779312721,23.856155921618,16.3416460344442,15.9356073553128,17.4179974615931,17.583857518234,16.7820142933649,13.6368208460088,68.5733384493147,50.5156617440932,68.5829442773804,59.8437358096084,53.782506624789,49.6520410973769,37.4004978686054,41.6687532811841,53.814036984864,30.1913233707445,27.5384301274693,24.6509761760503,22.7320990152401,20.9894973820637,24.1221760681684,8.12914036733061,37.519299530556,37.3189796052239,40.7388205860452,38.4892007193143,17.5881570313907,11.9021820443007,6.43941037930736,16.8669604193624,13.0664166892777,9.08892181347676,8.1931657357869,11.569893785015,10.7040303350319,42.2215595029962,36.9855864996723,13.277635371514,7.17435540392304,3.69266356971921,6.21221938938677,16.2295595922909,5.80683132570058,36.5989534522858,30.4542220551378,28.4358885007295,26.2865677747807,17.3782965784267,15.286132662597,29.1463705205924,16.6585839009448,21.7408277870588,4.81981974632711,6.67118400478862,14.4233138970477,19.8722090411363,5.93892442701128,2.65490276679926,42.0010500548118,45.9531806586422,33.9489143560617,13.8791889653963,15.6791925451403,10.3371317267288,22.1755574981278,22.4593348382374,9.7971394960103,3.16255825724996,4.12542172992747,6.46835250932197,38.7131352167317,16.5579115241926,14.5749183821483,15.4286003268778,10.167022603318,11.5184314421485,6.39376393140658,34.027397669238,14.4045808187398,5.51320995137405,8.90385765883992,12.1098320021929,22.7982856228429,20.0545537925269,14.2802582778203,27.1077178065761,3.15223013417866,57.5834868288764,38.5943443091226,52.9656348277375,123.569707795077,104.571084206584,83.0464768739677,30.9360742588817,27.8503390124079,32.2005938964307,34.3681422485441,34.1642873067626,28.0580864635051,31.4295541791442,25.5087721137652,20.9628061196331,22.5223458462651,15.5388496763632,14.1348208671376,22.2937754061884,4.97071450469541,51.8597503589455,35.7344545045109,38.2209112955896,28.389873498231,24.2820468138134,28.0467168314692,28.165737274981,35.6760014472423,32.7161154608218,60.3960302065015,33.4114807259124,33.4971787865869,36.4905387522296,45.7063759383481,59.8934993927635,64.4496104402933,45.4980302449097,55.0495158801457,64.983391956814,69.3639511143774,65.5378537232999,56.7651422320412,43.4662148099296,46.3741076706388,32.258025002113,5.21479882314986,93.9000582772294,103.260648957507,80.9203850874858,2.12508553435409,8.25802891985201,4.94509385521616,10.0753138167161,5.01572104035363,3.3885110557024,0.460325236507177,3.43737308063638,2.92150409984269,0.685082519770642,4.5323633843382,4.05013500139084,2.70192721934532,2.71885445390523,3.62432218226274,55.9413803478712,29.1288157582753,25.0978400458577,26.498632160444,30.8131349063134,18.5681943534514,18.4464784075341,14.4224540067226,14.1204452220399,12.6348605881899,17.7435509923168,15.2787336522722,18.6346599865066,18.2471684353877,19.3557530380417,18.5754539600399,18.8891451290114,20.255468148689,20.192209139362,20.3134509785468,15.7719856097291,20.4097177083238,19.313331385733,19.1857269954674,19.3865323655581,19.7998182466523,21.7684287718599,23.1501346065302,16.9755142307327,14.5896990631012,19.100237917992,17.9278157923526,19.6430900721451,19.5220419894317,13.3105561576988,5.74564329257276,14.9716229405061,10.3138105943183,7.07766828654721,12.1325280515734,16.2307484934295
|short_description=p1@Gmnn
}}
}}

Revision as of 19:36, 17 April 2012

Short description:p1@Gmnn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gmnn_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000110382, NM_020567, uc007pwh.1_5end
EntrezGene:Gmnn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gmnn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.07
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A197.60
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A393.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5173.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H254.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I962.17
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.01
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I123.26
GP2+ M cell, pool3.CNhs13240.11847-124I220.69
Ileum epithelium, pool1.CNhs13199.10252-104B928.31
Ileum epithelium, pool2.CNhs13232.10253-104C132.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I349.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G669.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F547.08
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F662.34
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F759.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G836.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H193.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H372.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H432.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F910.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E329.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.44
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G141.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G243.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.87
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C536.95
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I125.37
adrenal gland, embryo E18.CNhs11026.1262-18F527.13
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I312.82
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G257.50
bone (os femoris), neonate N02.CNhs11227.1985-43F520.71
bone (os femoris), neonate N16.CNhs11225.1525-43A641.52
bone (os femoris), neonate N20.CNhs11195.1350-25C344.61
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H720.95
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C764.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D195.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D466.58
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.24
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C642.29
eyeball, embryo E14.CNhs10521.399-16E237.93
eyeball, embryo E15.CNhs10593.426-16C936.19
eyeball, embryo E17.CNhs11023.1261-18D430.29
eyeball, neonate N00.CNhs11207.633-15C629.32
eyeball, neonate N01.CNhs11140.1532-43E726.90
eyeball, neonate N02.CNhs11205.1551-44G819.49
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E238.16
forelimb, embryo E12.CNhs10600.359-14H232.53
forelimb, embryo E13.CNhs10589.384-1E224.81
forelimb, embryo E14.CNhs10577.413-26A820.39
forelimb, embryo E15.CNhs11007.437-20E724.75
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B515.23
gonad, embryo E13.CNhs11044.1564-45I638.81
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C875.84
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D288.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D571.61
heart, embryo E11.CNhs10586.331-24E939.77
heart, embryo E12.CNhs11015.353-12F539.40
heart, embryo E13.CNhs11013.376-3I950.24
heart, embryo E14.CNhs10597.403-26D431.25
heart, embryo E15.CNhs11017.431-16C840.34
heart, embryo E16.CNhs11021.457-17C648.75
heart, embryo E17.CNhs11025.479-18E540.23
heart, embryo E18.CNhs11030.1283-20G343.19
heart, neonate N00.CNhs11213.639-21E337.36
heart, neonate N03.CNhs11221.1349-25I244.92
heart, neonate N10.CNhs11118.749-24G119.21
heart, neonate N16.CNhs11209.782-15G116.38
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D226.44
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I319.16
intestine, adult.CNhs10496.178-9A329.35
intestine, embryo E12.CNhs11019.1251-16I548.63
intestine, embryo E13.CNhs11010.381-16D544.59
intestine, embryo E15.CNhs10602.976-16D826.93
intestine, embryo E16.CNhs10585.463-22H417.95
intestine, embryo E17.CNhs10582.482-18D324.46
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E916.31
intestine, neonate N06.CNhs11102.688-20B818.10
intestine, neonate N07.CNhs11095.720-20F215.72
intestine, neonate N10.CNhs11098.755-23A519.11
intestine, neonate N20.CNhs11187.827-18D126.07
intestine, neonate N25.CNhs11121.1352-25E335.88
intestine, neonate N30.CNhs11131.1384-42G126.68
kidney, embryo E14.CNhs10606.411-4I932.62
kidney, embryo E15.CNhs10997.434-16F841.36
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I227.29
kidney, embryo E18.CNhs11001.1288-20C723.86
kidney, neonate N00.CNhs11214.646-21G716.34
kidney, neonate N10.CNhs11206.758-6D515.94
kidney, neonate N20.CNhs11113.832-19I117.42
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H116.78
liver, adult pregnant day01.CNhs10466.508-5B213.64
liver, embryo E12.CNhs10601.355-15F868.57
liver, embryo E13.CNhs10524.378-3H650.52
liver, embryo E14.CNhs10594.409-16E168.58
liver, embryo E15.CNhs10520.433-16D759.84
liver, embryo E16.CNhs10523.462-17F553.78
liver, embryo E17.CNhs10510.481-18A349.65
liver, embryo E18.CNhs10579.499-43G437.40
liver, neonate N00.CNhs11117.641-24F441.67
liver, neonate N03.CNhs11123.1345-25G253.81
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H227.54
liver, neonate N10.CNhs11115.751-24B924.65
liver, neonate N20.CNhs11220.823-25A322.73
liver, neonate N25.CNhs11198.1368-26H120.99
liver, neonate N30.CNhs11106.1382-42D124.12
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G237.52
lung, embryo E14.CNhs10604.404-26F837.32
lung, embryo E15.CNhs11020.432-17C540.74
lung, embryo E16.CNhs10998.458-17B638.49
lung, embryo E17.CNhs10605.480-44A617.59
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E516.87
lung, neonate N07.CNhs11111.715-19A313.07
lung, neonate N10.CNhs11219.750-23E69.09
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A136.99
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.60
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.44
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F442.00
pancreas, embryo E15.CNhs11042.1556-45F245.95
pancreas, embryo E16.CNhs11003.460-26E533.95
pancreas, embryo E17.CNhs10599.1558-45G313.88
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D722.18
pancreas, neonate N02.CNhs11139.1539-43D822.46
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E638.71
pituitary gland, embryo E13.CNhs11009.370-44C716.56
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B915.43
pituitary gland, embryo E16.CNhs11036.449-43F610.17
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I734.03
placenta, adult pregnant day17.CNhs10464.577-18G314.40
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H322.80
skin, neonate N06.CNhs11097.693-20I520.05
skin, neonate N10.CNhs11108.762-6C414.28
small intestine, neonate N16.CNhs11114.790-21I127.11
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G257.58
spleen, embryo E16.CNhs11035.461-43C138.59
spleen, embryo E18.CNhs11011.1271-21F252.97
spleen, neonate N10.CNhs11116.752-24D1123.57
spleen, neonate N20.CNhs11112.824-19H1104.57
spleen, neonate N25.CNhs11099.1354-25G383.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.20
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E334.16
stomach, embryo E15.CNhs10603.1252-16G828.06
stomach, embryo E16.CNhs11022.459-17D431.43
stomach, embryo E17.CNhs11006.1035-18D525.51
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B822.52
stomach, neonate N07.CNhs11210.718-18A915.54
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I122.29
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G551.86
testis, embryo E13.CNhs11031.389-23F535.73
testis, embryo E15.CNhs11034.443-27C538.22
testis, embryo E16.CNhs11033.470-26G528.39
testis, embryo E17.CNhs11029.486-18I524.28
testis, embryo E18.CNhs11027.503-18G528.05
testis, neonate N00.CNhs11189.1300-22B728.17
testis, neonate N07.CNhs11222.726-26I435.68
testis, neonate N10.CNhs11204.763-44D932.72
testis, neonate N20.CNhs11110.839-18H360.40
testis, neonate N30.CNhs11130.1391-42E233.41
thymus, adult.CNhs10471.38-12B533.50
thymus, embryo E14.CNhs11041.402-44I436.49
thymus, embryo E15.CNhs11005.430-45I245.71
thymus, embryo E16.CNhs11002.456-26C559.89
thymus, embryo E17.CNhs10581.478-18C164.45
thymus, embryo E18.CNhs10595.1273-19G445.50
thymus, neonate N02.CNhs11181.1541-43F855.05
thymus, neonate N03.CNhs11137.2104-43C764.98
thymus, neonate N06.CNhs11197.681-26C469.36
thymus, neonate N07.CNhs11211.713-19D365.54
thymus, neonate N10.CNhs11194.748-24E456.77
thymus, neonate N20.CNhs11186.820-7A243.47
thymus, neonate N25.CNhs11125.1362-25G746.37
thymus, neonate N30.CNhs11132.1393-42G232.26
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H393.90
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7103.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G580.92
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I855.94
whole body, embryo E12.CNhs10587.857-27C929.13
whole body, embryo E13.CNhs10512.372-23H225.10
whole body, embryo E14.5.CNhs10578.420-27D226.50
whole body, embryo E14.CNhs10519.395-14B130.81
whole body, embryo E16.CNhs10514.453-14F218.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.52
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B416.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:24853744..24853819,-&oldid=753027"