Personal tools

FFCP PHASE1:Mm9::chr16:37654479..37654492,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:37654479..37654492,-
|short_description=p2@Ndufb4
|description=CAGE_peak_2_at_Ndufb4_5end
|association_with_transcript=-25bp_to_NM_026610,uc007zei.1_5end
|EntrezGene=68194
|EntrezGene=68194
|HGNC=
|HGNC=
|UniProt=Q9CQC7
|UniProt=Q9CQC7
|association_with_transcript=-25bp_to_NM_026610,uc007zei.1_5end
|description=CAGE_peak_2_at_Ndufb4_5end
|id=chr16:37654479..37654492,-
|ontology_enrichment_disease=
|phase1_expression=1.60148847104794,6.63053274514786,5.45999087267443,3.32710632437513,3.00537437967808,4.70061961353291,4.90586545250604,1.42035655785734,4.08287294239834,1.87251621057595,3.08192342805909,1.67521533890206,4.79362043807376,2.01066925563694,1.99865857089398,4.25198061518635,0.699561878128147,2.83915948822414,2.74228867211478,2.97072756258621,2.63634199468316,1.78723712161594,4.17919662622297,7.99962113967033,5.96464130774642,9.18771142584032,8.61523992318149,7.32602191132023,7.22088993934221,6.30075324399827,6.65191531965914,1.27006134691926,1.23012957516914,0,6.35473563452804,6.4831511689812,7.35009682544529,0.837063261473815,5.4693474116666,5.23523743973798,1.17646297606203,0,0.485510353031154,3.02152363141385,3.24406179902447,6.9747765821439,17.2126095756569,10.247182349881,7.0299578475031,7.77719596297134,6.15940255151595,15.8127820801469,3.02008690903925,2.17608642603403,2.68875039313971,1.80081605225163,3.15186783932632,9.7977697532714,5.46254444320914,1.5869729378161,6.97214543856797,9.82649143000483,6.22506357277798,4.49949858640699,3.9554654502679,9.9467216092454,3.89480143673926,7.68436610643109,4.76972216618997,1.35005938331691,5.25812403378455,5.71301968807607,5.30084498283872,3.91970557487853,4.69642807989358,5.51531271966013,1.10115880999389,3.95830748064082,4.14737639791857,3.29715719325485,3.20206752608434,3.12548022334056,5.30447698102624,0.56276261003168,1.5279824777681,1.47314292736834,3.27454865837937,3.16879057903011,4.16494063332512,4.00529268565963,0.289864488701678,0.860423876981386,2.03991400112325,1.61910957491345,6.49776417447669,4.03224198387602,0.983110940922263,3.40860645156115,5.19572009205738,9.18682893726885,4.78867627240714,7.69958864485907,2.54805239706646,0,5.19578498426914,4.30711771307668,5.05524445014783,1.25602267690966,2.58937883647172,2.67195850316685,1.38788261412909,2.13125834818499,1.15307748628029,2.86373017049983,3.41007250693544,4.39833069653864,1.48316980640624,6.65157041831594,2.65383165584962,4.04417124868523,3.5334642953663,2.90925151881133,35.4144346314432,0.585561594023094,2.30391377494801,3.57639877292028,4.79260498023681,6.59893004092748,4.57452817463033,3.44518470631092,2.74500361691176,3.8952849154988,3.30266208365325,1.53429274398198,1.66230435647648,5.51620294430376,3.56437773476107,2.86136032403214,6.06534620240819,2.10441855886474,1.56144531555244,3.21862946206862,2.88099407688559,1.65775299619287,3.06164246180975,0.896796041993948,2.81105173679186,1.03481348295606,0.862271971731369,3.40390944302075,1.75951124163949,3.06874025398605,1.11218899690239,2.43776516565517,1.23469281844766,3.58261680273288,2.1066395619397,6.94839349209731,1.13665399758237,2.89976081549703,3.04883877975425,1.44049649168812,2.60419209143731,2.55793501271625,3.08534225774756,3.0229412817553,7.24338183778972,5.95503246072564,2.63295759861569,3.2833492815819,3.64809642956351,3.36259971078264,3.07370161407471,2.95254121272818,3.36463917702604,5.35103984372279,1.65209391491899,2.11560453330835,1.06644125267617,1.85789337488351,2.19074684247559,3.22693639397348,3.11329261382818,2.66315876557583,1.42358718463353,4.44687177754829,3.77002813200404,4.97391180102877,1.75467678407208,5.39291645192533,3.8904848977445,2.19055400579804,6.82804443431094,2.17072173958485,0,3.05476991767971,2.52138233317913,4.55882829287071,4.11037491307672,5.01874503130647,2.511979645462,7.77402132707343,5.33614728756868,3.00321190288969,2.75182593158484,1.79889689907883,3.44862206360455,2.65294875727659,1.2731292589071,2.5892652370573,1.78348749452539,5.21666685057355,1.43768206527355,1.48856379067401,2.80833905803104,2.77836765741823,3.76734568396016,5.30687873499704,2.77129785249907,4.54779388249163,4.4000543639347,1.01847051465113,0.704070744865506,3.1826188913945,4.28478553594825,3.12213836572478,1.41871629695572,2.87904096543407,1.75400245523236,2.45794972073607,1.72684981865896,2.60368305446721,4.52373851817817,2.17562273527484,2.45882136509518,4.96686143348518,3.21101179975584,4.68846746368813,3.11476396215683,2.7771801992481,3.78609863299508,3.12350995437311,1.72338718186239,2.86762557543062,2.45078541490634,2.54768877709949,2.42886421004937,1.75353514746787,3.95287777946523,4.17717711348349,1.41940085208269,3.38324646967785,4.39794790254655,2.14461159864296,1.32745138339963,0.485561272309963,1.209294227859,3.58349651536206,5.31543407185391,4.30409207121498,3.10113951801865,3.27180356529755,4.63446591900138,2.84433082142234,2.10837217149998,12.3762651897824,2.7235168460303,1.26042765821917,1.16422815404479,1.50035924522115,4.07882537377229,1.78368817602071,1.81003922662333,3.65357938937519,3.05073220482823,2.1183207086382,1.98475558249466,3.2977250588296,2.74489525383039,4.22190474497091,3.58117032009409,2.46211349617592,1.7488850197791,5.7481843623258,2.05045056957423,1.23832120777933,0.370389054739423,2.26042148405629,0.820165366326151,2.74533807847827,3.56954702987096,3.49878630809145,3.31679937130617,3.81868247206045,2.84702394223022,2.84647253977588,1.83609079397062,0.836353184057875,1.74690050996942,3.64133735239016,2.31429676030941,4.18809507174447,3.49960427887841,1.24267862617385,1.12738587736838,2.0932316446157,4.79829622325583,4.4723773319131,6.84547064431975,2.36538575687089,6.57200536416222,3.9061315453185,4.19437377702843,1.93267296660805,2.59227005632079,0.948033361884535,2.02725215290164,2.87590680061516,1.42912905275575,2.50637373934474,2.38417625737518,2.40390899039938,3.39685912501528,1.71642964911851,2.362411006305,2.11734988787365,1.26695244961678,2.30908419936791,2.80504565235765,3.17422537061296,2.66383144048878,2.06341870201794,2.68615386182526,1.54551675225752,5.44279178808428,1.83151624267265,6.64541975145104,0.501572104035363,3.3885110557024,2.76195141904306,4.58316410751517,4.29632955859219,2.05524755931193,0.755393897389701,0.675022500231806,4.05289082901798,2.71885445390523,2.5888015587591,1.14166082342594,0.798049746802062,2.39027048055788,3.64660075602441,2.09613162627982,2.38996560985018,3.33370091702423,4.32673620201678,2.88827288632634,2.27427490587418,2.28131369901216,2.64076877940507,2.34103768674706,1.92075457214608,3.79074095107048,1.90517476513229,4.51948871184936,5.01563973205633,2.88460130562315,5.7407578852415,2.74295401908332,2.30718548007139,1.90748951957857,2.32554266611726,2.1645157495526,1.18460451048347,3.65855945745545,2.89376682581627,4.34573164306758,7.2948495315506,6.16902094245706,4.92522411877817,3.27384834535751,2.16911577660352,2.12197272079256,1.74867404556562,2.8071793013449,2.36358159453128,4.3996316375834,1.76473135295612,3.70988536992674
|phase1_expression=1.60148847104794,6.63053274514786,5.45999087267443,3.32710632437513,3.00537437967808,4.70061961353291,4.90586545250604,1.42035655785734,4.08287294239834,1.87251621057595,3.08192342805909,1.67521533890206,4.79362043807376,2.01066925563694,1.99865857089398,4.25198061518635,0.699561878128147,2.83915948822414,2.74228867211478,2.97072756258621,2.63634199468316,1.78723712161594,4.17919662622297,7.99962113967033,5.96464130774642,9.18771142584032,8.61523992318149,7.32602191132023,7.22088993934221,6.30075324399827,6.65191531965914,1.27006134691926,1.23012957516914,0,6.35473563452804,6.4831511689812,7.35009682544529,0.837063261473815,5.4693474116666,5.23523743973798,1.17646297606203,0,0.485510353031154,3.02152363141385,3.24406179902447,6.9747765821439,17.2126095756569,10.247182349881,7.0299578475031,7.77719596297134,6.15940255151595,15.8127820801469,3.02008690903925,2.17608642603403,2.68875039313971,1.80081605225163,3.15186783932632,9.7977697532714,5.46254444320914,1.5869729378161,6.97214543856797,9.82649143000483,6.22506357277798,4.49949858640699,3.9554654502679,9.9467216092454,3.89480143673926,7.68436610643109,4.76972216618997,1.35005938331691,5.25812403378455,5.71301968807607,5.30084498283872,3.91970557487853,4.69642807989358,5.51531271966013,1.10115880999389,3.95830748064082,4.14737639791857,3.29715719325485,3.20206752608434,3.12548022334056,5.30447698102624,0.56276261003168,1.5279824777681,1.47314292736834,3.27454865837937,3.16879057903011,4.16494063332512,4.00529268565963,0.289864488701678,0.860423876981386,2.03991400112325,1.61910957491345,6.49776417447669,4.03224198387602,0.983110940922263,3.40860645156115,5.19572009205738,9.18682893726885,4.78867627240714,7.69958864485907,2.54805239706646,0,5.19578498426914,4.30711771307668,5.05524445014783,1.25602267690966,2.58937883647172,2.67195850316685,1.38788261412909,2.13125834818499,1.15307748628029,2.86373017049983,3.41007250693544,4.39833069653864,1.48316980640624,6.65157041831594,2.65383165584962,4.04417124868523,3.5334642953663,2.90925151881133,35.4144346314432,0.585561594023094,2.30391377494801,3.57639877292028,4.79260498023681,6.59893004092748,4.57452817463033,3.44518470631092,2.74500361691176,3.8952849154988,3.30266208365325,1.53429274398198,1.66230435647648,5.51620294430376,3.56437773476107,2.86136032403214,6.06534620240819,2.10441855886474,1.56144531555244,3.21862946206862,2.88099407688559,1.65775299619287,3.06164246180975,0.896796041993948,2.81105173679186,1.03481348295606,0.862271971731369,3.40390944302075,1.75951124163949,3.06874025398605,1.11218899690239,2.43776516565517,1.23469281844766,3.58261680273288,2.1066395619397,6.94839349209731,1.13665399758237,2.89976081549703,3.04883877975425,1.44049649168812,2.60419209143731,2.55793501271625,3.08534225774756,3.0229412817553,7.24338183778972,5.95503246072564,2.63295759861569,3.2833492815819,3.64809642956351,3.36259971078264,3.07370161407471,2.95254121272818,3.36463917702604,5.35103984372279,1.65209391491899,2.11560453330835,1.06644125267617,1.85789337488351,2.19074684247559,3.22693639397348,3.11329261382818,2.66315876557583,1.42358718463353,4.44687177754829,3.77002813200404,4.97391180102877,1.75467678407208,5.39291645192533,3.8904848977445,2.19055400579804,6.82804443431094,2.17072173958485,0,3.05476991767971,2.52138233317913,4.55882829287071,4.11037491307672,5.01874503130647,2.511979645462,7.77402132707343,5.33614728756868,3.00321190288969,2.75182593158484,1.79889689907883,3.44862206360455,2.65294875727659,1.2731292589071,2.5892652370573,1.78348749452539,5.21666685057355,1.43768206527355,1.48856379067401,2.80833905803104,2.77836765741823,3.76734568396016,5.30687873499704,2.77129785249907,4.54779388249163,4.4000543639347,1.01847051465113,0.704070744865506,3.1826188913945,4.28478553594825,3.12213836572478,1.41871629695572,2.87904096543407,1.75400245523236,2.45794972073607,1.72684981865896,2.60368305446721,4.52373851817817,2.17562273527484,2.45882136509518,4.96686143348518,3.21101179975584,4.68846746368813,3.11476396215683,2.7771801992481,3.78609863299508,3.12350995437311,1.72338718186239,2.86762557543062,2.45078541490634,2.54768877709949,2.42886421004937,1.75353514746787,3.95287777946523,4.17717711348349,1.41940085208269,3.38324646967785,4.39794790254655,2.14461159864296,1.32745138339963,0.485561272309963,1.209294227859,3.58349651536206,5.31543407185391,4.30409207121498,3.10113951801865,3.27180356529755,4.63446591900138,2.84433082142234,2.10837217149998,12.3762651897824,2.7235168460303,1.26042765821917,1.16422815404479,1.50035924522115,4.07882537377229,1.78368817602071,1.81003922662333,3.65357938937519,3.05073220482823,2.1183207086382,1.98475558249466,3.2977250588296,2.74489525383039,4.22190474497091,3.58117032009409,2.46211349617592,1.7488850197791,5.7481843623258,2.05045056957423,1.23832120777933,0.370389054739423,2.26042148405629,0.820165366326151,2.74533807847827,3.56954702987096,3.49878630809145,3.31679937130617,3.81868247206045,2.84702394223022,2.84647253977588,1.83609079397062,0.836353184057875,1.74690050996942,3.64133735239016,2.31429676030941,4.18809507174447,3.49960427887841,1.24267862617385,1.12738587736838,2.0932316446157,4.79829622325583,4.4723773319131,6.84547064431975,2.36538575687089,6.57200536416222,3.9061315453185,4.19437377702843,1.93267296660805,2.59227005632079,0.948033361884535,2.02725215290164,2.87590680061516,1.42912905275575,2.50637373934474,2.38417625737518,2.40390899039938,3.39685912501528,1.71642964911851,2.362411006305,2.11734988787365,1.26695244961678,2.30908419936791,2.80504565235765,3.17422537061296,2.66383144048878,2.06341870201794,2.68615386182526,1.54551675225752,5.44279178808428,1.83151624267265,6.64541975145104,0.501572104035363,3.3885110557024,2.76195141904306,4.58316410751517,4.29632955859219,2.05524755931193,0.755393897389701,0.675022500231806,4.05289082901798,2.71885445390523,2.5888015587591,1.14166082342594,0.798049746802062,2.39027048055788,3.64660075602441,2.09613162627982,2.38996560985018,3.33370091702423,4.32673620201678,2.88827288632634,2.27427490587418,2.28131369901216,2.64076877940507,2.34103768674706,1.92075457214608,3.79074095107048,1.90517476513229,4.51948871184936,5.01563973205633,2.88460130562315,5.7407578852415,2.74295401908332,2.30718548007139,1.90748951957857,2.32554266611726,2.1645157495526,1.18460451048347,3.65855945745545,2.89376682581627,4.34573164306758,7.2948495315506,6.16902094245706,4.92522411877817,3.27384834535751,2.16911577660352,2.12197272079256,1.74867404556562,2.8071793013449,2.36358159453128,4.3996316375834,1.76473135295612,3.70988536992674
|short_description=p2@Ndufb4
}}
}}

Revision as of 00:31, 18 April 2012

Short description:p2@Ndufb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ndufb4_5end
Coexpression cluster:NA
Association with transcript: -25bp_to_NM_026610, uc007zei.1_5end
EntrezGene:Ndufb4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ndufb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D54.11
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H17.77
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B76.57
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:37654479..37654492,-&oldid=790005"