Personal tools

FFCP PHASE1:Mm9::chr3:30501539..30501575,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:30501539..30501575,+
|short_description=p@chr3:30501539..30501575,+
|description=CAGE_peak_at_chr3:30501539..30501575,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr3:30501539..30501575,+
|id=chr3:30501539..30501575,+
|ontology_enrichment_disease=
|phase1_expression=32.0297694209588,28.2670080187882,14.5599756604652,19.9626379462508,23.5420993074783,14.6054966563344,14.0167584357315,29.9566110384457,22.2446180999633,21.0658073689794,21.4022460281881,19.4644067948621,38.8625656943837,37.1536710280739,12.9912807108108,27.5366363650163,25.8837894907414,35.80495576816,42.3683599841733,32.6780031884483,17.4338744809693,17.0780436065523,21.4183827093927,19.1990907352088,13.7645568640302,12.0588712464154,15.0766698655676,20.4697671051595,19.5724122040065,21.926621289114,11.0865255327652,12.065582795733,7.38077745101484,0,12.1317680295535,16.1247605997738,12.6585000882669,40.1790365507431,21.0960543021426,43.4524707498253,42.940898626264,34.1522742479223,36.8987868303677,20.2693876940679,24.1277096302445,17.2533947031981,1.56478268869608,2.18025156380447,2.85592037554813,3.30530828426282,3.21968769738334,0,42.2812167265496,23.9369506863744,25.2070349356848,13.3774906738692,13.4670716771216,8.76642556871652,7.48570905180512,5.28990979272033,3.80298842103708,2.71075625655306,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,1.49800055259202,3.45796474789399,11.509546966241,10.5304631898719,9.67494822216357,3.99911378165325,4.63823935998388,16.046294697159,10.2554653989513,7.35375029288017,5.50579404996943,9.83192503255945,12.4421291937557,8.04506355154182,9.78917786545783,11.9810075228055,10.0505879640497,11.8180148106653,8.09830713217094,8.54422897873636,15.3761415263031,11.7431650869939,21.5062389066243,18.7417469064828,38.2621125086215,14.6272059086836,16.319312008986,8.63525106620507,13.6453047664011,8.51251085484938,19.3813299781818,19.7699174190547,16.1067322853779,10.6001872353102,25.7743458191325,7.69958864485907,2.54805239706646,0,8.87613268145978,9.37431502257865,10.1104889002957,17.0133980781399,38.5817446634286,20.0396887737513,14.9197381018877,13.7009465240464,15.912469310668,16.7302131013411,27.3981687626192,14.2003248202533,21.2587672251562,25.5940861748244,21.230653246797,22.9708926925321,17.6673214768315,27.6378894287077,16.775258509631,27.814175716097,20.3163305609051,17.8819938646014,34.0274953596814,23.9961092397363,38.8834894843578,18.8736205650077,14.640019290196,17.3403005915753,14.0797699355744,15.3429274398198,16.8308316093244,15.412919991437,26.2745558733816,25.379022004459,25.2722758433675,25.4634645622634,20.0385482162564,20.4612872945791,25.3887603025542,22.4550178575215,24.7652856910833,24.5978342946912,24.6435535592087,27.9399640398137,15.7364634840975,22.8818357003061,19.7065259063623,16.8780713969233,23.0779216857246,20.89512999133,27.1632420058485,23.0879749509452,25.2796747432765,23.9333553616685,23.017243451043,18.2270679831242,17.5894544985822,23.2280059284709,21.3070262026689,23.8084720414359,23.4486011588815,23.4859284197912,18.7791380979733,27.556620798652,22.5446994381468,23.6401148273897,26.5095007214948,23.9767979377545,21.2963611832319,23.7545361205858,15.9820360908737,23.4622516224768,27.755177770639,14.8092317331585,17.7029247944244,19.7401171081373,17.7837096624489,14.5212137728807,15.3440850252961,17.690983228468,13.2868137232463,19.1050787479853,18.8501406600202,22.48208134065,21.056121408865,22.4704852163555,21.3976669375947,22.5029638777435,13.6560888686219,18.7367560679955,12.3978509240388,24.2345080135924,24.8259183574561,24.7579444212825,25.4843244610757,25.97938604441,22.7648155369993,21.1009150306279,12.4510103376603,18.8534969459186,17.6903095601883,21.8116249013308,21.7060329885698,20.0177042594506,18.3330613282622,15.5355914223438,19.4562272130042,14.5517548989683,10.0637744569148,21.9563159124417,19.3463357331028,18.6908369680863,14.351793081753,18.8152973331713,24.2026679118252,18.759649765278,24.6077114427459,19.6904299499218,27.9281395463317,25.460951131156,26.4228441383475,17.5620283072019,32.3152045417692,24.582580551014,25.5127629851979,24.5794972073607,24.3485824430913,26.0368305446721,22.6186925908908,8.70249094109935,18.6870423747234,18.7636987487218,17.6605648986571,15.9407893765396,22.2951525712279,22.2174415939848,13.8823616543153,15.6175497718655,14.4333676480975,14.5770966751057,20.7202766896627,11.889214293131,15.382806663646,16.0740721851222,18.9738133414331,22.1711708331047,24.839514911447,13.1768546713769,24.1072699843293,24.2506080769627,25.2215762845929,14.3240575331439,10.883648050731,16.7858520982749,7.38254732201932,13.8345816574767,20.4158351602895,21.4484900391728,21.3898427030833,19.2782422340848,12.6502330289999,23.721174947083,23.1498931912576,20.1668425315067,10.0899773350549,21.005029433096,20.0394464015769,17.658512942605,17.7712942250291,12.4830629136986,19.9470951854154,27.114505070569,14.9959310677374,19.6214641000361,29.063596805263,19.4207618268662,21.7257666085708,19.3686261699172,15.4484843413821,18.3571048990405,22.7258271461144,22.4961686079913,26.2976228864991,28.8203739217177,27.338845544205,26.5382680919566,43.1745212184392,50.8023771934878,57.3529891288359,10.5013767981662,16.7658076598002,20.7385856469386,20.8450307786076,20.9088296014469,19.652630737156,17.6672293764115,19.3409086397286,15.4436005770577,16.2018716614741,20.5041973318685,29.8757257502621,25.7168459195644,21.0132282880514,20.417374776125,21.8280101677366,24.1607259451813,29.8087386160215,23.6971980415989,26.4245547952791,29.7148468615987,25.3466405506922,32.5491454247024,15.2043911467623,17.0500188893613,19.2282818007137,16.8285093927433,24.8351693476581,21.8755718126343,25.845667255551,28.9773711351184,26.3675551026299,28.6346365788627,29.2373642219257,25.0150788264857,27.6998258170318,24.713611814058,15.5390167361845,12.829081495155,17.7957693345923,22.9895616898307,16.7037403151552,20.5129819179337,20.5793643915903,18.5581678493084,9.60078132449013,11.9684561491866,10.8850147553485,9.96748457593388,8.22099023724771,10.5755145634558,14.8504950050997,10.3573876741571,15.8599843144472,15.0150490408028,19.9271707361619,29.5278406316763,17.75629499843,14.3432963070293,15.5113740344707,10.1113929647508,14.6682840349066,17.9250499797838,15.4041220604071,20.4684741528676,16.9831130926461,15.2787336522722,15.5444902400005,19.1435205690559,17.8049953762401,21.9095097990214,16.9191115879489,15.8185560780238,13.5988347265091,15.1614887738429,16.8005933668854,15.795346748181,16.9289694862598,17.2962235792471,18.3513291809895,17.9382968730354,16.6464455314223,15.2580432633949,17.654534799962,14.5896990631012,16.0157274467635,16.1547351095924,19.2338590289754,19.5220419894317,14.0821826016233,17.4867404556562,18.7145286756327,15.9004579995741,22.5720231841235,21.1767762354735,21.0999730414584
|phase1_expression=32.0297694209588,28.2670080187882,14.5599756604652,19.9626379462508,23.5420993074783,14.6054966563344,14.0167584357315,29.9566110384457,22.2446180999633,21.0658073689794,21.4022460281881,19.4644067948621,38.8625656943837,37.1536710280739,12.9912807108108,27.5366363650163,25.8837894907414,35.80495576816,42.3683599841733,32.6780031884483,17.4338744809693,17.0780436065523,21.4183827093927,19.1990907352088,13.7645568640302,12.0588712464154,15.0766698655676,20.4697671051595,19.5724122040065,21.926621289114,11.0865255327652,12.065582795733,7.38077745101484,0,12.1317680295535,16.1247605997738,12.6585000882669,40.1790365507431,21.0960543021426,43.4524707498253,42.940898626264,34.1522742479223,36.8987868303677,20.2693876940679,24.1277096302445,17.2533947031981,1.56478268869608,2.18025156380447,2.85592037554813,3.30530828426282,3.21968769738334,0,42.2812167265496,23.9369506863744,25.2070349356848,13.3774906738692,13.4670716771216,8.76642556871652,7.48570905180512,5.28990979272033,3.80298842103708,2.71075625655306,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,1.49800055259202,3.45796474789399,11.509546966241,10.5304631898719,9.67494822216357,3.99911378165325,4.63823935998388,16.046294697159,10.2554653989513,7.35375029288017,5.50579404996943,9.83192503255945,12.4421291937557,8.04506355154182,9.78917786545783,11.9810075228055,10.0505879640497,11.8180148106653,8.09830713217094,8.54422897873636,15.3761415263031,11.7431650869939,21.5062389066243,18.7417469064828,38.2621125086215,14.6272059086836,16.319312008986,8.63525106620507,13.6453047664011,8.51251085484938,19.3813299781818,19.7699174190547,16.1067322853779,10.6001872353102,25.7743458191325,7.69958864485907,2.54805239706646,0,8.87613268145978,9.37431502257865,10.1104889002957,17.0133980781399,38.5817446634286,20.0396887737513,14.9197381018877,13.7009465240464,15.912469310668,16.7302131013411,27.3981687626192,14.2003248202533,21.2587672251562,25.5940861748244,21.230653246797,22.9708926925321,17.6673214768315,27.6378894287077,16.775258509631,27.814175716097,20.3163305609051,17.8819938646014,34.0274953596814,23.9961092397363,38.8834894843578,18.8736205650077,14.640019290196,17.3403005915753,14.0797699355744,15.3429274398198,16.8308316093244,15.412919991437,26.2745558733816,25.379022004459,25.2722758433675,25.4634645622634,20.0385482162564,20.4612872945791,25.3887603025542,22.4550178575215,24.7652856910833,24.5978342946912,24.6435535592087,27.9399640398137,15.7364634840975,22.8818357003061,19.7065259063623,16.8780713969233,23.0779216857246,20.89512999133,27.1632420058485,23.0879749509452,25.2796747432765,23.9333553616685,23.017243451043,18.2270679831242,17.5894544985822,23.2280059284709,21.3070262026689,23.8084720414359,23.4486011588815,23.4859284197912,18.7791380979733,27.556620798652,22.5446994381468,23.6401148273897,26.5095007214948,23.9767979377545,21.2963611832319,23.7545361205858,15.9820360908737,23.4622516224768,27.755177770639,14.8092317331585,17.7029247944244,19.7401171081373,17.7837096624489,14.5212137728807,15.3440850252961,17.690983228468,13.2868137232463,19.1050787479853,18.8501406600202,22.48208134065,21.056121408865,22.4704852163555,21.3976669375947,22.5029638777435,13.6560888686219,18.7367560679955,12.3978509240388,24.2345080135924,24.8259183574561,24.7579444212825,25.4843244610757,25.97938604441,22.7648155369993,21.1009150306279,12.4510103376603,18.8534969459186,17.6903095601883,21.8116249013308,21.7060329885698,20.0177042594506,18.3330613282622,15.5355914223438,19.4562272130042,14.5517548989683,10.0637744569148,21.9563159124417,19.3463357331028,18.6908369680863,14.351793081753,18.8152973331713,24.2026679118252,18.759649765278,24.6077114427459,19.6904299499218,27.9281395463317,25.460951131156,26.4228441383475,17.5620283072019,32.3152045417692,24.582580551014,25.5127629851979,24.5794972073607,24.3485824430913,26.0368305446721,22.6186925908908,8.70249094109935,18.6870423747234,18.7636987487218,17.6605648986571,15.9407893765396,22.2951525712279,22.2174415939848,13.8823616543153,15.6175497718655,14.4333676480975,14.5770966751057,20.7202766896627,11.889214293131,15.382806663646,16.0740721851222,18.9738133414331,22.1711708331047,24.839514911447,13.1768546713769,24.1072699843293,24.2506080769627,25.2215762845929,14.3240575331439,10.883648050731,16.7858520982749,7.38254732201932,13.8345816574767,20.4158351602895,21.4484900391728,21.3898427030833,19.2782422340848,12.6502330289999,23.721174947083,23.1498931912576,20.1668425315067,10.0899773350549,21.005029433096,20.0394464015769,17.658512942605,17.7712942250291,12.4830629136986,19.9470951854154,27.114505070569,14.9959310677374,19.6214641000361,29.063596805263,19.4207618268662,21.7257666085708,19.3686261699172,15.4484843413821,18.3571048990405,22.7258271461144,22.4961686079913,26.2976228864991,28.8203739217177,27.338845544205,26.5382680919566,43.1745212184392,50.8023771934878,57.3529891288359,10.5013767981662,16.7658076598002,20.7385856469386,20.8450307786076,20.9088296014469,19.652630737156,17.6672293764115,19.3409086397286,15.4436005770577,16.2018716614741,20.5041973318685,29.8757257502621,25.7168459195644,21.0132282880514,20.417374776125,21.8280101677366,24.1607259451813,29.8087386160215,23.6971980415989,26.4245547952791,29.7148468615987,25.3466405506922,32.5491454247024,15.2043911467623,17.0500188893613,19.2282818007137,16.8285093927433,24.8351693476581,21.8755718126343,25.845667255551,28.9773711351184,26.3675551026299,28.6346365788627,29.2373642219257,25.0150788264857,27.6998258170318,24.713611814058,15.5390167361845,12.829081495155,17.7957693345923,22.9895616898307,16.7037403151552,20.5129819179337,20.5793643915903,18.5581678493084,9.60078132449013,11.9684561491866,10.8850147553485,9.96748457593388,8.22099023724771,10.5755145634558,14.8504950050997,10.3573876741571,15.8599843144472,15.0150490408028,19.9271707361619,29.5278406316763,17.75629499843,14.3432963070293,15.5113740344707,10.1113929647508,14.6682840349066,17.9250499797838,15.4041220604071,20.4684741528676,16.9831130926461,15.2787336522722,15.5444902400005,19.1435205690559,17.8049953762401,21.9095097990214,16.9191115879489,15.8185560780238,13.5988347265091,15.1614887738429,16.8005933668854,15.795346748181,16.9289694862598,17.2962235792471,18.3513291809895,17.9382968730354,16.6464455314223,15.2580432633949,17.654534799962,14.5896990631012,16.0157274467635,16.1547351095924,19.2338590289754,19.5220419894317,14.0821826016233,17.4867404556562,18.7145286756327,15.9004579995741,22.5720231841235,21.1767762354735,21.0999730414584
|short_description=p@chr3:30501539..30501575,+
}}
}}

Revision as of 12:24, 18 April 2012

Short description:p@chr3:30501539..30501575, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:30501539..30501575, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:30501539..30501575+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E837.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.80
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.68
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.76
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I220.47
Ileum epithelium, pool1.CNhs13199.10252-104B919.57
Ileum epithelium, pool2.CNhs13232.10253-104C121.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G840.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.21
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D921.51
Mouse Schwann, donor2.CNhs12573.11746-123F918.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.01
accessory axillary lymph node, adult.CNhs10475.1063-29H938.58
adrenal gland, adult.CNhs10508.49-24D720.04
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F516.73
adrenal gland, neonate N00.CNhs11191.1311-23C127.40
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A821.26
aorta, adult.CNhs10498.46-23H125.59
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F522.97
bone (os femoris), neonate N16.CNhs11225.1525-43A617.67
bone (os femoris), neonate N20.CNhs11195.1350-25C327.64
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B227.81
cerebellum, neonate N30.CNhs11135.1395-42I220.32
colon, adult.CNhs10468.36-18H717.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.88
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.38
epididymis, adult.CNhs10490.58-23B225.27
eyeball, adult.CNhs10484.31-12G425.46
eyeball, embryo E12.CNhs11016.345-16C620.04
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C925.39
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C624.77
eyeball, neonate N01.CNhs11140.1532-43E724.60
eyeball, neonate N02.CNhs11205.1551-44G824.64
eyeball, neonate N16.CNhs11188.777-19A227.94
forelimb, embryo E11.CNhs10596.335-25E215.74
forelimb, embryo E12.CNhs10600.359-14H222.88
forelimb, embryo E13.CNhs10589.384-1E219.71
forelimb, embryo E14.CNhs10577.413-26A816.88
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B527.16
gonad, embryo E13.CNhs11044.1564-45I623.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.02
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I923.23
heart, embryo E14.CNhs10597.403-26D421.31
heart, embryo E15.CNhs11017.431-16C823.81
heart, embryo E16.CNhs11021.457-17C623.45
heart, embryo E17.CNhs11025.479-18E523.49
heart, embryo E18.CNhs11030.1283-20G318.78
heart, neonate N00.CNhs11213.639-21E327.56
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G123.64
heart, neonate N16.CNhs11209.782-15G126.51
heart, neonate N20.CNhs11127.821-26I623.98
heart, neonate N25.CNhs11196.1351-25D321.30
heart, neonate N30.CNhs11202.1390-42D223.75
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I327.76
intestine, adult.CNhs10496.178-9A314.81
intestine, embryo E12.CNhs11019.1251-16I517.70
intestine, embryo E13.CNhs11010.381-16D519.74
intestine, embryo E15.CNhs10602.976-16D817.78
intestine, embryo E16.CNhs10585.463-22H414.52
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F717.69
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E919.11
intestine, neonate N06.CNhs11102.688-20B818.85
intestine, neonate N07.CNhs11095.720-20F222.48
intestine, neonate N10.CNhs11098.755-23A521.06
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E321.40
intestine, neonate N30.CNhs11131.1384-42G122.50
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F818.74
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I224.23
kidney, embryo E18.CNhs11001.1288-20C724.83
kidney, neonate N00.CNhs11214.646-21G724.76
kidney, neonate N10.CNhs11206.758-6D525.48
kidney, neonate N20.CNhs11113.832-19I125.98
kidney, neonate N25.CNhs11122.1353-25F322.76
kidney, neonate N30.CNhs11203.1385-42H121.10
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E121.81
liver, embryo E15.CNhs10520.433-16D721.71
liver, embryo E16.CNhs10523.462-17F520.02
liver, embryo E17.CNhs10510.481-18A318.33
liver, embryo E18.CNhs10579.499-43G415.54
liver, neonate N00.CNhs11117.641-24F419.46
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A318.69
liver, neonate N25.CNhs11198.1368-26H114.35
liver, neonate N30.CNhs11106.1382-42D118.82
lung, adult.CNhs10474.28-22B124.20
lung, embryo E12.CNhs10522.354-16G218.76
lung, embryo E14.CNhs10604.404-26F824.61
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B627.93
lung, embryo E17.CNhs10605.480-44A625.46
lung, embryo E18.CNhs10583.1287-20I626.42
lung, neonate N00.CNhs11224.640-42C617.56
lung, neonate N06.CNhs11212.683-20E532.32
lung, neonate N07.CNhs11111.715-19A324.58
lung, neonate N10.CNhs11219.750-23E625.51
lung, neonate N20.CNhs11109.822-18A424.58
lung, neonate N25.CNhs11119.1359-25C724.35
lung, neonate N30.CNhs11133.1394-42H226.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B618.69
mammary gland, adult pregnant day19.CNhs10476.588-5H218.76
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C722.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I922.17
ovary, adult.CNhs10507.91-2I724.84
ovary, embryo E18.CNhs11040.505-44H713.18
ovary, neonate N00.CNhs11217.1299-22I424.11
oviduct, adult pregnant day01.CNhs10500.988-6G624.25
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E620.17
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A521.01
pituitary gland, embryo E15.CNhs10592.427-16B920.04
pituitary gland, embryo E16.CNhs11036.449-43F617.66
pituitary gland, embryo E17.CNhs11039.1265-44F517.77
pituitary gland, neonate N00.CNhs11190.1308-22E912.48
placenta, adult pregnant day10.CNhs10472.539-13I719.95
placenta, adult pregnant day17.CNhs10464.577-18G327.11
prostate, adult.CNhs10470.859-1F815.00
skin, adult.CNhs10492.30-1C319.62
skin, neonate N00.CNhs11124.650-25G429.06
skin, neonate N03.CNhs11215.662-22H319.42
skin, neonate N06.CNhs11097.693-20I521.73
skin, neonate N10.CNhs11108.762-6C419.37
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C918.36
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F226.30
spleen, neonate N10.CNhs11116.752-24D128.82
spleen, neonate N20.CNhs11112.824-19H127.34
spleen, neonate N25.CNhs11099.1354-25G326.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C950.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D357.35
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G820.74
stomach, embryo E16.CNhs11022.459-17D420.85
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C619.65
stomach, neonate N03.CNhs11193.1340-24B817.67
stomach, neonate N07.CNhs11210.718-18A919.34
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I116.20
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F525.72
testis, embryo E15.CNhs11034.443-27C521.01
testis, embryo E16.CNhs11033.470-26G520.42
testis, embryo E17.CNhs11029.486-18I521.83
testis, embryo E18.CNhs11027.503-18G524.16
testis, neonate N00.CNhs11189.1300-22B729.81
testis, neonate N07.CNhs11222.726-26I423.70
testis, neonate N10.CNhs11204.763-44D926.42
testis, neonate N20.CNhs11110.839-18H329.71
testis, neonate N30.CNhs11130.1391-42E225.35
thymus, adult.CNhs10471.38-12B532.55
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I217.05
thymus, embryo E16.CNhs11002.456-26C519.23
thymus, embryo E17.CNhs10581.478-18C116.83
thymus, embryo E18.CNhs10595.1273-19G424.84
thymus, neonate N02.CNhs11181.1541-43F821.88
thymus, neonate N03.CNhs11137.2104-43C725.85
thymus, neonate N06.CNhs11197.681-26C428.98
thymus, neonate N07.CNhs11211.713-19D326.37
thymus, neonate N10.CNhs11194.748-24E428.63
thymus, neonate N20.CNhs11186.820-7A229.24
thymus, neonate N25.CNhs11125.1362-25G725.02
thymus, neonate N30.CNhs11132.1393-42G227.70
tongue, adult.CNhs10499.32-1B424.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.80
urinary bladder, adult.CNhs10481.879-12E422.99
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E520.51
vagina, adult.CNhs10502.89-27D520.58
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I819.93
whole body, embryo E12.CNhs10587.857-27C929.53
whole body, embryo E13.CNhs10512.372-23H217.76
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.52
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I517.49
whole body, embryo E18.CNhs10516.493-3B318.71
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C622.57
whole body, neonate N06.CNhs10515.692-21D121.18
whole body, neonate N10.CNhs10518.761-6B421.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:30501539..30501575,%2B&oldid=884155"