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FFCP PHASE1:Mm9::chr3:88981385..88981465,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:88981385..88981465,+
|short_description=p1@Scamp3
|description=CAGE_peak_1_at_Scamp3_5end
|association_with_transcript=0bp_to_ENSMUST00000029684,ENSMUST00000098941,ENSMUST00000120697,ENSMUST00000136165,ENSMUST00000148881,ENSMUST00000156447,NM_011886,uc008pxw.1,uc008pxx.1,uc012csh.1_5end
|EntrezGene=24045
|EntrezGene=24045
|HGNC=
|HGNC=
|UniProt=O35609,E9Q855,Q3UXS0
|UniProt=O35609,E9Q855,Q3UXS0
|association_with_transcript=0bp_to_ENSMUST00000029684,ENSMUST00000098941,ENSMUST00000120697,ENSMUST00000136165,ENSMUST00000148881,ENSMUST00000156447,NM_011886,uc008pxw.1,uc008pxx.1,uc012csh.1_5end
|description=CAGE_peak_1_at_Scamp3_5end
|id=chr3:88981385..88981465,+
|ontology_enrichment_disease=
|phase1_expression=25.9441132309766,37.689344025051,49.5949170934594,39.0178832585811,32.5582224465126,31.0576653036996,35.7427340111154,102.39479548917,26.0459135980583,30.8965174745031,47.9410311031414,61.8234232213857,93.6467992723695,117.230759643876,44.9698178451145,33.0034685845416,31.4802845157666,52.2089883667883,53.8859724070553,43.7121341351971,44.4776407490095,35.5461605299169,34.4783721663395,54.5574161725517,53.6817717697178,42.4931653445115,51.2606775429299,42.663304071806,55.2968150618048,41.0809111508687,49.0024428548223,70.4884047540191,107.6363378273,15.8481681015439,28.3074587356249,36.4053873335098,23.0711372576477,43.5272895966384,46.0987853269042,23.0350447348471,27.6468799374577,40.9827290975067,30.5871522409627,62.1930280799352,64.1715974619527,68.6464853084689,290.267188753123,145.422779305758,154.878758827803,189.569151597426,118.288526273431,149.50266693957,46.3079992719352,59.4796956449302,74.612823409627,107.019925390954,108.30964029685,87.1485835948878,73.0362423703148,71.4137822017244,93.1732163154083,145.025459725589,205.427097901673,231.72417719996,269.960516980784,251.509960690919,169.573662553417,144.466082800905,59.6215270773747,64.3978325842164,57.6290394102787,89.6944091027943,87.9056792987422,51.5686264694956,54.0568456542853,84.5681283681219,82.5869107495415,68.057351199405,73.7311359629969,71.8780268129557,69.9880473558434,65.6350846901518,83.7548997004143,67.5315132038016,59.5913166329559,105.182405014099,79.3010262051003,75.8645744508973,89.6598129064899,113.886341080926,48.4073696131802,69.6943340354923,61.1974200336975,105.242122369374,89.6691456077783,82.4369472259097,76.5422089718048,60.5027645152105,56.1137769942197,62.5411046883302,30.5630220915397,57.746914836443,73.8935195149272,78.2173373468664,62.3494198112297,57.7660493283225,58.1353111767001,54.9224461448678,106.16453229534,54.7751493149203,47.0145235536228,48.4100110516304,57.1926433195025,46.724018571313,38.5690959405112,51.2719692625076,41.7759495471092,77.6498546659926,49.538190909193,41.0887798866419,47.9226095059054,39.7597707570882,50.325775528893,49.772735491963,39.585427587743,44.1940705510863,37.9813944683767,53.9912457894067,35.9608742616773,64.8593468622882,50.7825669128675,47.1203820423242,48.3231610134529,32.2201476236216,52.3625872290091,46.7254837635142,29.940772971993,34.0875099471655,43.468314450592,54.9253243863697,29.6674609954964,36.3245325004887,45.9158431003641,29.6888491136359,29.9360596265843,30.3629517075094,32.5144984222259,38.8055056108524,42.8980305936356,40.846913316249,39.4130518127245,38.5784489072532,33.6437171562973,40.7455034830935,37.8639130990616,33.8358253591438,55.4748417977455,68.1971953853995,52.0019203893935,43.9106637775264,30.0193356775803,34.5719158005149,40.4833497850709,35.0240332510379,35.3271688512096,36.7403632705644,30.8514411609562,31.0595810696671,36.5322866807927,37.922684202271,46.7767031079588,46.9301959635317,46.1055242111206,43.6170860971208,55.5165464209296,41.4705587888516,63.4404063328892,65.583740532559,34.7659848372431,34.3710274353449,44.5881416174443,50.0175141065889,59.3749377065804,60.1112978515687,48.4019642775402,45.786309413275,37.1976109024399,39.9902508802713,43.2820273404447,49.4350674759822,38.4725728776956,45.005927755487,48.744650544942,34.1603052703089,52.9726357663478,36.6572390121566,36.4630675875136,29.4570443539338,40.0919645367791,46.9400270575135,44.9016361626332,45.6569506510662,66.1089358404342,57.2278712606203,51.301897724546,50.8188373989769,46.0492475551902,46.306014672464,32.0828573244589,44.5929013048756,32.264910128232,31.5745625166294,33.0666875012915,35.3533900285078,40.8769351780074,49.5054600776339,56.5101852594023,59.8229966490575,53.3936719581488,30.508117295048,37.644909558108,28.5171744102316,34.7341567466983,38.6939454690594,42.1337244368244,42.7342688808579,34.3644614151496,36.3202091023991,45.2851542987263,46.3733180645539,41.6170806296808,46.1430496875022,131.188417027167,167.522950616163,77.6987551370077,53.5317287831181,59.5642688854708,52.7452589664914,47.3771992138592,49.4843017320571,58.3690205920075,54.2709854572327,52.9941558422685,69.7788890021452,64.6116154838943,77.5629694361401,59.9119838478844,52.8983102819475,60.8743178037646,47.5555548304274,51.0984306749767,42.557679276474,30.4598613991187,55.9248716876895,83.6294371541766,40.3015856017269,42.3252979750651,48.6601105770217,74.4160770059547,62.7167701805612,34.6293912845416,36.3533729477506,37.7887221087805,50.5658812697306,50.6009321159994,41.2542172992747,39.1505546616856,35.1119133361055,44.6287459050503,38.366329270655,40.6109135040806,47.981211934957,38.5044708208963,35.3179340972935,67.1161085062212,37.70610861376,46.090435193487,43.3650845236092,30.5167766455261,34.3783672090488,30.2012030327935,27.5756711571703,42.5562021479582,71.5741665760567,54.507810974515,39.6262786489387,35.0017656728755,25.2413732386286,38.4110779896081,29.9699406900545,26.5166350790414,27.9902904647316,23.3557955729476,88.7843674754056,44.1288711045684,41.2738518267503,36.1817891753034,30.9450678101414,34.9380101993884,33.3114935570507,30.0858578840223,39.7869031815725,33.8295080291579,59.6485740563449,6.20062232552609,45.3035134513256,42.357373557017,40.4458471755619,39.6520658076634,30.2431464628493,29.6913813773758,30.3376216686404,28.1023043060905,12.5623742829523,12.3852902690882,56.8820017130721,40.5450430580328,39.5437185084585,36.5077512567604,46.0098607865427,46.0940743092535,46.5156389642279,48.1467858589122,41.9010767284813,45.6478771863449,44.3635214602098,52.0425083150278,49.4528866031293,54.8152671231558,54.4152920676507,74.3652943803117,56.0711603809223,56.7450003310585,38.0583500243415,78.8266396894964,41.2091154601346,52.3058844952921,41.6304846349352,45.7448992519824,58.0009797999043,53.8521782633033,51.5559547031063,48.6408589037156,53.6329667146687,40.5013500139084,44.1314779159736,42.142244035531,30.5478583933574,21.6915556450929,41.4985868337072,37.3906596601554,45.2178493747027,25.5728058406138,32.9079880125525,45.1160857437279,41.0009763905399,50.384315905915,41.6950399410266,44.1053981809017,40.1774107152342,50.0982064963871,46.3542103411254,47.0970845436029,53.3448934237042,44.8472341406591,40.5109362973781,46.1536208899703,42.8348857591096,38.4013562671665,39.0446773550542,38.8650989614133,37.3540290745084,35.573345796995,36.0458229618542,35.8538826830634,38.1451081584872,40.0622135845292,42.0856703743304,39.50546103535,43.3419722452479,50.3354183098718,45.2415576263021,45.5259601915494,54.7085165684102,38.1308521766016,37.1726923503556,42.4660097192832,42.353552470947,49.1559811515294
|phase1_expression=25.9441132309766,37.689344025051,49.5949170934594,39.0178832585811,32.5582224465126,31.0576653036996,35.7427340111154,102.39479548917,26.0459135980583,30.8965174745031,47.9410311031414,61.8234232213857,93.6467992723695,117.230759643876,44.9698178451145,33.0034685845416,31.4802845157666,52.2089883667883,53.8859724070553,43.7121341351971,44.4776407490095,35.5461605299169,34.4783721663395,54.5574161725517,53.6817717697178,42.4931653445115,51.2606775429299,42.663304071806,55.2968150618048,41.0809111508687,49.0024428548223,70.4884047540191,107.6363378273,15.8481681015439,28.3074587356249,36.4053873335098,23.0711372576477,43.5272895966384,46.0987853269042,23.0350447348471,27.6468799374577,40.9827290975067,30.5871522409627,62.1930280799352,64.1715974619527,68.6464853084689,290.267188753123,145.422779305758,154.878758827803,189.569151597426,118.288526273431,149.50266693957,46.3079992719352,59.4796956449302,74.612823409627,107.019925390954,108.30964029685,87.1485835948878,73.0362423703148,71.4137822017244,93.1732163154083,145.025459725589,205.427097901673,231.72417719996,269.960516980784,251.509960690919,169.573662553417,144.466082800905,59.6215270773747,64.3978325842164,57.6290394102787,89.6944091027943,87.9056792987422,51.5686264694956,54.0568456542853,84.5681283681219,82.5869107495415,68.057351199405,73.7311359629969,71.8780268129557,69.9880473558434,65.6350846901518,83.7548997004143,67.5315132038016,59.5913166329559,105.182405014099,79.3010262051003,75.8645744508973,89.6598129064899,113.886341080926,48.4073696131802,69.6943340354923,61.1974200336975,105.242122369374,89.6691456077783,82.4369472259097,76.5422089718048,60.5027645152105,56.1137769942197,62.5411046883302,30.5630220915397,57.746914836443,73.8935195149272,78.2173373468664,62.3494198112297,57.7660493283225,58.1353111767001,54.9224461448678,106.16453229534,54.7751493149203,47.0145235536228,48.4100110516304,57.1926433195025,46.724018571313,38.5690959405112,51.2719692625076,41.7759495471092,77.6498546659926,49.538190909193,41.0887798866419,47.9226095059054,39.7597707570882,50.325775528893,49.772735491963,39.585427587743,44.1940705510863,37.9813944683767,53.9912457894067,35.9608742616773,64.8593468622882,50.7825669128675,47.1203820423242,48.3231610134529,32.2201476236216,52.3625872290091,46.7254837635142,29.940772971993,34.0875099471655,43.468314450592,54.9253243863697,29.6674609954964,36.3245325004887,45.9158431003641,29.6888491136359,29.9360596265843,30.3629517075094,32.5144984222259,38.8055056108524,42.8980305936356,40.846913316249,39.4130518127245,38.5784489072532,33.6437171562973,40.7455034830935,37.8639130990616,33.8358253591438,55.4748417977455,68.1971953853995,52.0019203893935,43.9106637775264,30.0193356775803,34.5719158005149,40.4833497850709,35.0240332510379,35.3271688512096,36.7403632705644,30.8514411609562,31.0595810696671,36.5322866807927,37.922684202271,46.7767031079588,46.9301959635317,46.1055242111206,43.6170860971208,55.5165464209296,41.4705587888516,63.4404063328892,65.583740532559,34.7659848372431,34.3710274353449,44.5881416174443,50.0175141065889,59.3749377065804,60.1112978515687,48.4019642775402,45.786309413275,37.1976109024399,39.9902508802713,43.2820273404447,49.4350674759822,38.4725728776956,45.005927755487,48.744650544942,34.1603052703089,52.9726357663478,36.6572390121566,36.4630675875136,29.4570443539338,40.0919645367791,46.9400270575135,44.9016361626332,45.6569506510662,66.1089358404342,57.2278712606203,51.301897724546,50.8188373989769,46.0492475551902,46.306014672464,32.0828573244589,44.5929013048756,32.264910128232,31.5745625166294,33.0666875012915,35.3533900285078,40.8769351780074,49.5054600776339,56.5101852594023,59.8229966490575,53.3936719581488,30.508117295048,37.644909558108,28.5171744102316,34.7341567466983,38.6939454690594,42.1337244368244,42.7342688808579,34.3644614151496,36.3202091023991,45.2851542987263,46.3733180645539,41.6170806296808,46.1430496875022,131.188417027167,167.522950616163,77.6987551370077,53.5317287831181,59.5642688854708,52.7452589664914,47.3771992138592,49.4843017320571,58.3690205920075,54.2709854572327,52.9941558422685,69.7788890021452,64.6116154838943,77.5629694361401,59.9119838478844,52.8983102819475,60.8743178037646,47.5555548304274,51.0984306749767,42.557679276474,30.4598613991187,55.9248716876895,83.6294371541766,40.3015856017269,42.3252979750651,48.6601105770217,74.4160770059547,62.7167701805612,34.6293912845416,36.3533729477506,37.7887221087805,50.5658812697306,50.6009321159994,41.2542172992747,39.1505546616856,35.1119133361055,44.6287459050503,38.366329270655,40.6109135040806,47.981211934957,38.5044708208963,35.3179340972935,67.1161085062212,37.70610861376,46.090435193487,43.3650845236092,30.5167766455261,34.3783672090488,30.2012030327935,27.5756711571703,42.5562021479582,71.5741665760567,54.507810974515,39.6262786489387,35.0017656728755,25.2413732386286,38.4110779896081,29.9699406900545,26.5166350790414,27.9902904647316,23.3557955729476,88.7843674754056,44.1288711045684,41.2738518267503,36.1817891753034,30.9450678101414,34.9380101993884,33.3114935570507,30.0858578840223,39.7869031815725,33.8295080291579,59.6485740563449,6.20062232552609,45.3035134513256,42.357373557017,40.4458471755619,39.6520658076634,30.2431464628493,29.6913813773758,30.3376216686404,28.1023043060905,12.5623742829523,12.3852902690882,56.8820017130721,40.5450430580328,39.5437185084585,36.5077512567604,46.0098607865427,46.0940743092535,46.5156389642279,48.1467858589122,41.9010767284813,45.6478771863449,44.3635214602098,52.0425083150278,49.4528866031293,54.8152671231558,54.4152920676507,74.3652943803117,56.0711603809223,56.7450003310585,38.0583500243415,78.8266396894964,41.2091154601346,52.3058844952921,41.6304846349352,45.7448992519824,58.0009797999043,53.8521782633033,51.5559547031063,48.6408589037156,53.6329667146687,40.5013500139084,44.1314779159736,42.142244035531,30.5478583933574,21.6915556450929,41.4985868337072,37.3906596601554,45.2178493747027,25.5728058406138,32.9079880125525,45.1160857437279,41.0009763905399,50.384315905915,41.6950399410266,44.1053981809017,40.1774107152342,50.0982064963871,46.3542103411254,47.0970845436029,53.3448934237042,44.8472341406591,40.5109362973781,46.1536208899703,42.8348857591096,38.4013562671665,39.0446773550542,38.8650989614133,37.3540290745084,35.573345796995,36.0458229618542,35.8538826830634,38.1451081584872,40.0622135845292,42.0856703743304,39.50546103535,43.3419722452479,50.3354183098718,45.2415576263021,45.5259601915494,54.7085165684102,38.1308521766016,37.1726923503556,42.4660097192832,42.353552470947,49.1559811515294
|short_description=p1@Scamp3
}}
}}

Revision as of 13:11, 18 April 2012

Short description:p1@Scamp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scamp3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029684, ENSMUST00000098941, ENSMUST00000120697, ENSMUST00000136165, ENSMUST00000148881, ENSMUST00000156447, NM_011886, uc008pxw.1, uc008pxx.1, uc012csh.1_5end
EntrezGene:Scamp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scamp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I537.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I649.59
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I432.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I835.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9102.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E647.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F161.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E493.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8117.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A531.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A252.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A453.89
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A643.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H235.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I934.48
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D154.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D253.68
GP2+ M cell, pool1.CNhs13228.11845-124H942.49
GP2+ M cell, pool2.CNhs13231.11846-124I151.26
GP2+ M cell, pool3.CNhs13240.11847-124I242.66
Ileum epithelium, pool1.CNhs13199.10252-104B955.30
Ileum epithelium, pool2.CNhs13232.10253-104C141.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C849.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I370.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6107.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.41
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H240.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D862.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D964.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B368.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7290.27
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2145.42
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8154.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3189.57
Mouse Astrocytes, donor2.CNhs12078.11552-120C4118.29
Mouse Astrocytes, donor3.CNhs12107.11633-122C4149.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.31
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I959.48
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A174.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1107.02
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1108.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C587.15
Mouse Granule cells, donor1.CNhs12131.11713-123C373.04
Mouse Granule cells, donor2.CNhs12357.11731-123E371.41
Mouse Granule cells, donor3.CNhs12108.11636-122C793.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6145.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1205.43
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7231.72
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7269.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2251.51
Mouse Microglia, donor1.CNhs12629.11718-123C8169.57
Mouse Microglia, donor2.CNhs12634.11736-123E8144.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D559.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F564.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D957.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F189.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D587.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D251.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F254.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D684.57
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D382.59
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F368.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D773.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D471.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F469.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E483.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E567.53
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6105.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F679.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E175.86
Mouse Schwann, donor1.CNhs12507.11728-123D989.66
Mouse Schwann, donor2.CNhs12573.11746-123F9113.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G348.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F769.69
Mouse hepatocyte, donor1.CNhs13078.11714-123C461.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C8105.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F489.67
Mouse hepatocyte, donor8.CNhs13091.11824-124F682.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A776.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I760.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E356.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I862.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H157.75
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G162.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G257.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G358.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B654.92
accessory axillary lymph node, adult.CNhs10475.1063-29H9106.16
adrenal gland, adult.CNhs10508.49-24D754.78
adrenal gland, embryo E14.CNhs11038.406-44C547.01
adrenal gland, embryo E16.CNhs11004.1254-43D648.41
adrenal gland, embryo E17.CNhs11043.1263-45I157.19
adrenal gland, embryo E18.CNhs11026.1262-18F546.72
adrenal gland, neonate N00.CNhs11191.1311-23C138.57
adrenal gland, neonate N25.CNhs11223.1377-27I351.27
amnion, adult pregnant day17.5.CNhs10488.583-22A841.78
aorta, adult.CNhs10498.46-23H177.65
bone (os femoris), adult.CNhs10483.56-12G249.54
bone (os femoris), neonate N02.CNhs11227.1985-43F541.09
bone (os femoris), neonate N16.CNhs11225.1525-43A647.92
bone (os femoris), neonate N20.CNhs11195.1350-25C339.76
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B249.77
cerebellum, neonate N30.CNhs11135.1395-42I239.59
colon, adult.CNhs10468.36-18H744.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C737.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D153.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.96
corpora quadrigemina, adult.CNhs10501.16-22A464.86
corpus striatum, adult.CNhs10487.19-21D850.78
corpus striatum, neonate N00.CNhs11226.630-43F147.12
cortex, adult.CNhs10473.12-14D548.32
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F252.36
diencephalon, neonate N30.CNhs11201.1388-42B246.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B129.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A234.09
epididymis, adult.CNhs10490.58-23B243.47
eyeball, adult.CNhs10484.31-12G454.93
eyeball, embryo E12.CNhs11016.345-16C629.67
eyeball, embryo E14.CNhs10521.399-16E236.32
eyeball, embryo E15.CNhs10593.426-16C945.92
eyeball, embryo E17.CNhs11023.1261-18D429.69
eyeball, neonate N00.CNhs11207.633-15C629.94
eyeball, neonate N01.CNhs11140.1532-43E730.36
eyeball, neonate N02.CNhs11205.1551-44G832.51
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E242.90
forelimb, embryo E12.CNhs10600.359-14H240.85
forelimb, embryo E13.CNhs10589.384-1E239.41
forelimb, embryo E14.CNhs10577.413-26A838.58
forelimb, embryo E15.CNhs11007.437-20E733.64
forelimb, embryo E17.CNhs10598.1517-43C440.75
forelimb, embryo E18.CNhs11008.1520-43B537.86
gonad, embryo E13.CNhs11044.1564-45I633.84
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C855.47
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D268.20
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D552.00
heart, embryo E11.CNhs10586.331-24E943.91
heart, embryo E12.CNhs11015.353-12F530.02
heart, embryo E13.CNhs11013.376-3I934.57
heart, embryo E14.CNhs10597.403-26D440.48
heart, embryo E15.CNhs11017.431-16C835.02
heart, embryo E16.CNhs11021.457-17C635.33
heart, embryo E17.CNhs11025.479-18E536.74
heart, embryo E18.CNhs11030.1283-20G330.85
heart, neonate N00.CNhs11213.639-21E331.06
heart, neonate N03.CNhs11221.1349-25I236.53
heart, neonate N10.CNhs11118.749-24G137.92
heart, neonate N16.CNhs11209.782-15G146.78
heart, neonate N20.CNhs11127.821-26I646.93
heart, neonate N25.CNhs11196.1351-25D346.11
heart, neonate N30.CNhs11202.1390-42D243.62
hippocampus, adult.CNhs10478.13-16E855.52
hippocampus, neonate N00.CNhs11228.627-43G141.47
intestinal mucosa, adult.CNhs10506.860-29I363.44
intestine, adult.CNhs10496.178-9A365.58
intestine, embryo E12.CNhs11019.1251-16I534.77
intestine, embryo E13.CNhs11010.381-16D534.37
intestine, embryo E15.CNhs10602.976-16D844.59
intestine, embryo E16.CNhs10585.463-22H450.02
intestine, embryo E17.CNhs10582.482-18D359.37
intestine, embryo E18.CNhs10526.1289-20F760.11
intestine, neonate N00.CNhs11126.644-26D148.40
intestine, neonate N01.CNhs11192.1322-23E945.79
intestine, neonate N06.CNhs11102.688-20B837.20
intestine, neonate N07.CNhs11095.720-20F239.99
intestine, neonate N10.CNhs11098.755-23A543.28
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E338.47
intestine, neonate N30.CNhs11131.1384-42G145.01
kidney, embryo E14.CNhs10606.411-4I948.74
kidney, embryo E15.CNhs10997.434-16F834.16
kidney, embryo E16.CNhs10584.464-22A552.97
kidney, embryo E17.CNhs11028.483-18I236.66
kidney, embryo E18.CNhs11001.1288-20C736.46
kidney, neonate N00.CNhs11214.646-21G729.46
kidney, neonate N10.CNhs11206.758-6D540.09
kidney, neonate N20.CNhs11113.832-19I146.94
kidney, neonate N25.CNhs11122.1353-25F344.90
kidney, neonate N30.CNhs11203.1385-42H145.66
liver, adult pregnant day01.CNhs10466.508-5B266.11
liver, embryo E12.CNhs10601.355-15F857.23
liver, embryo E13.CNhs10524.378-3H651.30
liver, embryo E14.CNhs10594.409-16E150.82
liver, embryo E15.CNhs10520.433-16D746.05
liver, embryo E16.CNhs10523.462-17F546.31
liver, embryo E17.CNhs10510.481-18A332.08
liver, embryo E18.CNhs10579.499-43G444.59
liver, neonate N00.CNhs11117.641-24F432.26
liver, neonate N03.CNhs11123.1345-25G231.57
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H235.35
liver, neonate N10.CNhs11115.751-24B940.88
liver, neonate N20.CNhs11220.823-25A349.51
liver, neonate N25.CNhs11198.1368-26H156.51
liver, neonate N30.CNhs11106.1382-42D159.82
lung, adult.CNhs10474.28-22B153.39
lung, embryo E12.CNhs10522.354-16G230.51
lung, embryo E14.CNhs10604.404-26F837.64
lung, embryo E15.CNhs11020.432-17C528.52
lung, embryo E16.CNhs10998.458-17B634.73
lung, embryo E17.CNhs10605.480-44A638.69
lung, embryo E18.CNhs10583.1287-20I642.13
lung, neonate N00.CNhs11224.640-42C642.73
lung, neonate N06.CNhs11212.683-20E534.36
lung, neonate N07.CNhs11111.715-19A336.32
lung, neonate N10.CNhs11219.750-23E645.29
lung, neonate N20.CNhs11109.822-18A446.37
lung, neonate N25.CNhs11119.1359-25C741.62
lung, neonate N30.CNhs11133.1394-42H246.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1131.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1167.52
mammary gland, adult lactating day02.CNhs10480.595-22B677.70
mammary gland, adult pregnant day19.CNhs10476.588-5H253.53
medulla oblongata, adult.CNhs10477.17-12C259.56
medulla oblongata, neonate N30.CNhs11200.1396-42A352.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.48
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E158.37
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E254.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D769.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D864.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D977.56
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D459.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D552.90
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.87
olfactory brain, adult.CNhs10489.18-22I947.56
ovary, adult.CNhs10507.91-2I751.10
ovary, embryo E18.CNhs11040.505-44H742.56
ovary, neonate N00.CNhs11217.1299-22I430.46
oviduct, adult pregnant day01.CNhs10500.988-6G655.92
pancreas, adult.CNhs10486.34-16E483.63
pancreas, embryo E14.CNhs11012.405-44F440.30
pancreas, embryo E15.CNhs11042.1556-45F242.33
pancreas, embryo E16.CNhs11003.460-26E548.66
pancreas, embryo E17.CNhs10599.1558-45G374.42
pancreas, embryo E18.CNhs10580.1535-43I762.72
pancreas, neonate N00.CNhs11105.645-26G934.63
pancreas, neonate N01.CNhs11138.1531-43D736.35
pancreas, neonate N02.CNhs11139.1539-43D837.79
pancreas, neonate N16.CNhs11136.787-43B650.57
pancreas, neonate N25.CNhs11094.1555-45E250.60
pancreas, neonate N30.CNhs11182.1548-44H541.25
pituitary gland, adult.CNhs10493.21-1G839.15
pituitary gland, embryo E12.CNhs11018.346-16E635.11
pituitary gland, embryo E13.CNhs11009.370-44C744.63
pituitary gland, embryo E14.CNhs11037.398-44A538.37
pituitary gland, embryo E15.CNhs10592.427-16B940.61
pituitary gland, embryo E16.CNhs11036.449-43F647.98
pituitary gland, embryo E17.CNhs11039.1265-44F538.50
pituitary gland, neonate N00.CNhs11190.1308-22E935.32
placenta, adult pregnant day10.CNhs10472.539-13I767.12
placenta, adult pregnant day17.CNhs10464.577-18G337.71
prostate, adult.CNhs10470.859-1F846.09
skin, adult.CNhs10492.30-1C343.37
skin, neonate N00.CNhs11124.650-25G430.52
skin, neonate N03.CNhs11215.662-22H334.38
skin, neonate N06.CNhs11097.693-20I530.20
skin, neonate N10.CNhs11108.762-6C427.58
small intestine, neonate N16.CNhs11114.790-21I142.56
spinal cord, adult.CNhs10505.24-13C971.57
spleen, adult.CNhs10465.25-2G254.51
spleen, embryo E16.CNhs11035.461-43C139.63
spleen, embryo E18.CNhs11011.1271-21F235.00
spleen, neonate N10.CNhs11116.752-24D125.24
spleen, neonate N20.CNhs11112.824-19H138.41
spleen, neonate N25.CNhs11099.1354-25G329.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.36
stomach, adult.CNhs10503.33-1H688.78
stomach, embryo E12.CNhs10588.356-43E344.13
stomach, embryo E15.CNhs10603.1252-16G841.27
stomach, embryo E16.CNhs11022.459-17D436.18
stomach, embryo E17.CNhs11006.1035-18D530.95
stomach, embryo E18.CNhs10999.1286-20C634.94
stomach, neonate N03.CNhs11193.1340-24B833.31
stomach, neonate N07.CNhs11210.718-18A930.09
stomach, neonate N25.CNhs11104.1355-25E439.79
stomach, neonate N30.CNhs11134.1386-42I133.83
submandibular gland, adult.CNhs10469.59-29C159.65
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F545.30
testis, embryo E15.CNhs11034.443-27C542.36
testis, embryo E16.CNhs11033.470-26G540.45
testis, embryo E17.CNhs11029.486-18I539.65
testis, embryo E18.CNhs11027.503-18G530.24
testis, neonate N00.CNhs11189.1300-22B729.69
testis, neonate N07.CNhs11222.726-26I430.34
testis, neonate N10.CNhs11204.763-44D928.10
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B556.88
thymus, embryo E14.CNhs11041.402-44I440.55
thymus, embryo E15.CNhs11005.430-45I239.54
thymus, embryo E16.CNhs11002.456-26C536.51
thymus, embryo E17.CNhs10581.478-18C146.01
thymus, embryo E18.CNhs10595.1273-19G446.09
thymus, neonate N02.CNhs11181.1541-43F846.52
thymus, neonate N03.CNhs11137.2104-43C748.15
thymus, neonate N06.CNhs11197.681-26C441.90
thymus, neonate N07.CNhs11211.713-19D345.65
thymus, neonate N10.CNhs11194.748-24E444.36
thymus, neonate N20.CNhs11186.820-7A252.04
thymus, neonate N25.CNhs11125.1362-25G749.45
thymus, neonate N30.CNhs11132.1393-42G254.82
tongue, adult.CNhs10499.32-1B454.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H374.37
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F756.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G556.75
urinary bladder, adult.CNhs10481.879-12E438.06
uterus, adult pregnant day19.CNhs10497.590-15F578.83
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D552.31
vesicular gland, adult.CNhs10491.51-27F841.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.85
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A448.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A553.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I821.69
whole body, embryo E12.CNhs10587.857-27C941.50
whole body, embryo E13.CNhs10512.372-23H237.39
whole body, embryo E14.5.CNhs10578.420-27D245.22
whole body, embryo E14.CNhs10519.395-14B125.57
whole body, embryo E16.CNhs10514.453-14F232.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G545.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G541.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G550.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G541.70
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G544.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G540.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G550.10
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G547.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G553.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G544.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G540.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.15
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G542.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G538.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G540.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.09
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G550.34
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G545.24
whole body, embryo E17.5.CNhs10513.490-9F945.53
whole body, embryo E17.CNhs10517.475-3I554.71
whole body, embryo E18.CNhs10516.493-3B338.13
whole body, neonate N00.CNhs10525.657-19C237.17
whole body, neonate N01.CNhs10576.659-23C642.47
whole body, neonate N06.CNhs10515.692-21D142.35
whole body, neonate N10.CNhs10518.761-6B449.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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