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FFCP PHASE1:Mm9::chr4:106986968..106987002,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:106986968..106987002,+
|short_description=p1@Yipf1
|description=CAGE_peak_1_at_Yipf1_5end
|association_with_transcript=0bp_to_ENSMUST00000075693,ENSMUST00000139527,ENSMUST00000140162,NM_001205156,NM_145550_5end
|EntrezGene=230584
|EntrezGene=230584
|HGNC=
|HGNC=
|UniProt=Q91VU1,A2A8S3,A2A8S4
|UniProt=Q91VU1,A2A8S3,A2A8S4
|association_with_transcript=0bp_to_ENSMUST00000075693,ENSMUST00000139527,ENSMUST00000140162,NM_001205156,NM_145550_5end
|description=CAGE_peak_1_at_Yipf1_5end
|id=chr4:106986968..106987002,+
|ontology_enrichment_disease=
|phase1_expression=24.9832201483479,34.5485653562967,39.1299345875001,34.7833843002855,27.5492651470491,27.5322005935499,38.5460856982617,28.2780078337052,3.801295498095,6.78787126333781,8.56089841127525,9.97151987441705,23.4545000005752,22.2047822144253,13.6575002344422,15.5905955890166,15.3903613188192,32.8080651972567,30.987861994897,37.3462893582267,18.4543939627821,20.8510997521859,26.1199789138935,41.4380375034923,45.6524469323668,48.8097169497767,55.1375355083616,44.8180163986649,73.1590164907039,57.7148997150241,64.3018480900384,21.5910428976275,12.916360539276,15.8481681015439,37.5507105676657,44.218415665359,34.5046212083404,62.7797446105362,66.413504284523,64.916944252751,82.940639812373,66.2554120409692,58.2612423637384,16.366586336825,19.4643707941468,16.702754446713,50.0730460382745,42.7329306505675,48.9900187497872,46.4687458787537,36.3964696225943,37.3756667348926,22.6506518177944,26.8383992544197,20.8378155468328,24.9541652954869,23.7822755149168,37.1283906439758,15.3760510253294,17.9856932952491,14.5781222806421,43.0332555727798,29.3467282716676,38.2457379844595,34.6103226898441,48.3126478163348,30.8588113833957,46.1061966385865,14.101787273953,15.5256829081444,15.984697062705,29.9933533623994,26.5042249141936,11.3916443269907,13.0349840584801,26.6573448116906,17.6185409599022,19.7915374032041,26.1131106535614,18.4640802822271,19.8528186617229,18.2319679694866,31.8268618861574,34.3285192119325,23.0725354142983,19.7401152267357,21.7828671622628,23.2999307281626,19.3101792999619,29.6240515618599,23.4790235848359,40.4399222181252,21.759082678648,26.9851595818909,48.0834548911275,42.1145273871495,17.1342192560737,16.7021716126497,24.1600984280668,25.4404493647445,25.9151892389092,12.8326477414318,10.1922095882658,7.11066703153331,25.7624338803345,24.8292668165597,26.7927955857835,22.4942243046548,33.6619248741323,20.9303416081403,18.0424739836781,21.617048960162,19.832932764021,24.8692356911827,17.9910721917628,20.1066546127481,28.9218112249217,20.6777080395474,19.4614321428972,11.8089800461609,12.5879665522424,14.0613823409214,27.9587641827183,14.9318206475889,17.3840766655168,52.8796104281784,25.520621519761,30.5950392806638,36.0879444887504,20.8208988772704,20.1300265240196,11.8115090986093,22.7709859451882,24.2929684463814,24.3112012134685,22.8760180925538,14.155671575194,21.1491850037158,24.2613848096328,21.6755111563068,12.3614420814569,14.0240283704418,11.7040384373477,16.4268251440929,13.5392633311142,18.7046031615881,17.1474155944304,21.4723797713383,12.0718076042392,11.535470890237,15.4836989264275,14.4669183402199,17.7950239504383,14.2783388274088,18.108828003899,15.5246728118425,34.4084461783485,30.1097051324217,25.5747149456033,13.4631752148076,15.7132460187334,13.8647787324981,13.2577051927718,15.7411385397923,15.7352455145126,15.1147064087765,16.6329508867764,16.8142093008724,13.3293478429919,20.3567655458078,17.99727571918,14.9123987173839,14.9294078397914,19.862549976535,28.8097229532854,16.7734518178234,68.0662692946624,30.147364599644,10.4511242762265,9.98617688999886,16.2373001265838,22.5885547578144,33.3567065767305,46.7955040236896,46.5038480313621,64.2325923423642,56.5504219800606,54.9119862833576,44.6467759502785,48.536248067328,54.8990646681723,51.7767310461355,12.7077493638565,13.3670759753383,5.63538678365402,15.2738495883986,14.7403890247396,13.2556699592702,20.1092188055138,24.9461150085528,32.0277404796405,30.9726881443719,34.3885047421093,10.1775514486817,12.1866576970186,9.44420872016386,12.9830477688642,14.9529839046498,11.2035374783825,13.2340223227373,16.3756579042786,23.612281534175,17.2521847832825,23.8170206507842,24.3389385029357,21.7217835034516,25.6538301336334,28.946611281802,30.4842763774898,15.1593129416388,11.5705133273838,14.2585872051158,13.6120344007331,16.7506257441816,18.091316707337,18.5376965464909,22.3841904630791,21.0391455166336,17.3805697836661,28.5122167605384,28.3203370260069,31.678143829351,30.1582567878545,23.9318500880232,16.2282210096282,15.7283945393698,30.9862638676438,25.0833009307315,17.2131692645509,11.6136626514012,11.6738041184015,10.9322848403059,16.5876016254255,15.7719406648684,16.7099005561796,17.2676683781188,14.5731852602962,13.4437694639203,17.392662229647,13.1741739732941,20.1554920995741,22.6143316657414,16.125808976004,25.570369060743,18.5843193675948,20.3935734370184,26.9067965698628,26.4047111658257,24.8053590019849,16.2940628410282,20.6742634534577,21.0849563096953,22.4593348382374,27.8112346983518,23.1920938864997,18.5643977846736,24.8520912200265,14.4048875225048,22.2496936106338,19.5046701878749,18.4433842987965,15.8748247665843,17.1130981426206,17.9634319977614,22.9978273902436,27.114505070569,42.5619808246077,15.4993077764991,14.5317984026315,14.1132244331885,21.2482772325583,17.8913580722117,44.888048840997,23.1781627513137,19.4792804109552,16.0981757011314,17.4082855727529,18.0833718724503,14.6262823661497,20.132479242174,26.0066997890599,23.5118439903745,26.9489948918626,34.3681422485441,10.7554237817586,13.8257237646257,16.848833168201,16.3088870891286,21.6178938108716,26.29854754504,25.2919574519528,39.2633912976044,61.8263422601852,32.9309835936071,9.58277995763124,13.6060056900021,16.3803905552527,13.4171319957393,16.790777052105,18.0783054275133,15.1390837853023,12.6298253298632,16.0434796971338,10.8712854371703,10.3690802252832,21.8047673233443,21.8943232513377,17.4608627180206,22.3463815521807,18.2607229580831,24.4378066380956,19.8322491707949,19.9380861685679,26.1503105365702,22.09997392995,24.2991106179786,23.5848071390201,23.7643248851614,33.6605478282919,15.1909357022192,8.65745218158852,12.2907983554982,11.5840385291214,23.9555096599916,22.3342145786907,23.8097111547445,22.5086798033019,31.5990425542279,28.8023439734704,23.9369122983732,25.7802981047728,21.1379414282736,24.6629707117431,26.4387864086395,18.9006300064906,21.1650965515384,19.938265995305,21.2281727818246,7.16132698330819,15.1629451892392,14.000155671839,11.6691224192781,8.38452650511929,7.35374033800057,13.7792971237001,13.598313777767,14.1204452220399,14.4037410705365,13.6878821940729,13.0152175556393,14.7017166727715,13.3812568526177,14.3588672389033,16.1939855036245,13.4425818096032,16.2043745189512,10.3021475200827,14.4254941731709,16.8005933668854,13.4881612681096,15.4983523465759,13.6625631634389,13.5517507798076,15.2306294205018,15.0000937755674,16.3103221091463,13.1729990430486,8.97827634652382,15.659822392391,13.2981051207011,13.0953933814301,15.3387472774106,15.6254354894725,17.2369298777183,17.778802241851,17.8342974860088,16.6420848899894,17.4267221104417,14.839541479707
|phase1_expression=24.9832201483479,34.5485653562967,39.1299345875001,34.7833843002855,27.5492651470491,27.5322005935499,38.5460856982617,28.2780078337052,3.801295498095,6.78787126333781,8.56089841127525,9.97151987441705,23.4545000005752,22.2047822144253,13.6575002344422,15.5905955890166,15.3903613188192,32.8080651972567,30.987861994897,37.3462893582267,18.4543939627821,20.8510997521859,26.1199789138935,41.4380375034923,45.6524469323668,48.8097169497767,55.1375355083616,44.8180163986649,73.1590164907039,57.7148997150241,64.3018480900384,21.5910428976275,12.916360539276,15.8481681015439,37.5507105676657,44.218415665359,34.5046212083404,62.7797446105362,66.413504284523,64.916944252751,82.940639812373,66.2554120409692,58.2612423637384,16.366586336825,19.4643707941468,16.702754446713,50.0730460382745,42.7329306505675,48.9900187497872,46.4687458787537,36.3964696225943,37.3756667348926,22.6506518177944,26.8383992544197,20.8378155468328,24.9541652954869,23.7822755149168,37.1283906439758,15.3760510253294,17.9856932952491,14.5781222806421,43.0332555727798,29.3467282716676,38.2457379844595,34.6103226898441,48.3126478163348,30.8588113833957,46.1061966385865,14.101787273953,15.5256829081444,15.984697062705,29.9933533623994,26.5042249141936,11.3916443269907,13.0349840584801,26.6573448116906,17.6185409599022,19.7915374032041,26.1131106535614,18.4640802822271,19.8528186617229,18.2319679694866,31.8268618861574,34.3285192119325,23.0725354142983,19.7401152267357,21.7828671622628,23.2999307281626,19.3101792999619,29.6240515618599,23.4790235848359,40.4399222181252,21.759082678648,26.9851595818909,48.0834548911275,42.1145273871495,17.1342192560737,16.7021716126497,24.1600984280668,25.4404493647445,25.9151892389092,12.8326477414318,10.1922095882658,7.11066703153331,25.7624338803345,24.8292668165597,26.7927955857835,22.4942243046548,33.6619248741323,20.9303416081403,18.0424739836781,21.617048960162,19.832932764021,24.8692356911827,17.9910721917628,20.1066546127481,28.9218112249217,20.6777080395474,19.4614321428972,11.8089800461609,12.5879665522424,14.0613823409214,27.9587641827183,14.9318206475889,17.3840766655168,52.8796104281784,25.520621519761,30.5950392806638,36.0879444887504,20.8208988772704,20.1300265240196,11.8115090986093,22.7709859451882,24.2929684463814,24.3112012134685,22.8760180925538,14.155671575194,21.1491850037158,24.2613848096328,21.6755111563068,12.3614420814569,14.0240283704418,11.7040384373477,16.4268251440929,13.5392633311142,18.7046031615881,17.1474155944304,21.4723797713383,12.0718076042392,11.535470890237,15.4836989264275,14.4669183402199,17.7950239504383,14.2783388274088,18.108828003899,15.5246728118425,34.4084461783485,30.1097051324217,25.5747149456033,13.4631752148076,15.7132460187334,13.8647787324981,13.2577051927718,15.7411385397923,15.7352455145126,15.1147064087765,16.6329508867764,16.8142093008724,13.3293478429919,20.3567655458078,17.99727571918,14.9123987173839,14.9294078397914,19.862549976535,28.8097229532854,16.7734518178234,68.0662692946624,30.147364599644,10.4511242762265,9.98617688999886,16.2373001265838,22.5885547578144,33.3567065767305,46.7955040236896,46.5038480313621,64.2325923423642,56.5504219800606,54.9119862833576,44.6467759502785,48.536248067328,54.8990646681723,51.7767310461355,12.7077493638565,13.3670759753383,5.63538678365402,15.2738495883986,14.7403890247396,13.2556699592702,20.1092188055138,24.9461150085528,32.0277404796405,30.9726881443719,34.3885047421093,10.1775514486817,12.1866576970186,9.44420872016386,12.9830477688642,14.9529839046498,11.2035374783825,13.2340223227373,16.3756579042786,23.612281534175,17.2521847832825,23.8170206507842,24.3389385029357,21.7217835034516,25.6538301336334,28.946611281802,30.4842763774898,15.1593129416388,11.5705133273838,14.2585872051158,13.6120344007331,16.7506257441816,18.091316707337,18.5376965464909,22.3841904630791,21.0391455166336,17.3805697836661,28.5122167605384,28.3203370260069,31.678143829351,30.1582567878545,23.9318500880232,16.2282210096282,15.7283945393698,30.9862638676438,25.0833009307315,17.2131692645509,11.6136626514012,11.6738041184015,10.9322848403059,16.5876016254255,15.7719406648684,16.7099005561796,17.2676683781188,14.5731852602962,13.4437694639203,17.392662229647,13.1741739732941,20.1554920995741,22.6143316657414,16.125808976004,25.570369060743,18.5843193675948,20.3935734370184,26.9067965698628,26.4047111658257,24.8053590019849,16.2940628410282,20.6742634534577,21.0849563096953,22.4593348382374,27.8112346983518,23.1920938864997,18.5643977846736,24.8520912200265,14.4048875225048,22.2496936106338,19.5046701878749,18.4433842987965,15.8748247665843,17.1130981426206,17.9634319977614,22.9978273902436,27.114505070569,42.5619808246077,15.4993077764991,14.5317984026315,14.1132244331885,21.2482772325583,17.8913580722117,44.888048840997,23.1781627513137,19.4792804109552,16.0981757011314,17.4082855727529,18.0833718724503,14.6262823661497,20.132479242174,26.0066997890599,23.5118439903745,26.9489948918626,34.3681422485441,10.7554237817586,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|short_description=p1@Yipf1
}}
}}

Revision as of 14:38, 18 April 2012

Short description:p1@Yipf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Yipf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000075693, ENSMUST00000139527, ENSMUST00000140162, NM_001205156, NM_145550_5end
EntrezGene:Yipf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Yipf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I534.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I334.78
CD326+ enterocyte, pool2.CNhs13197.11849-124I427.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I838.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.81
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A637.35
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.12
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D141.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D245.65
GP2+ M cell, pool1.CNhs13228.11845-124H948.81
GP2+ M cell, pool2.CNhs13231.11846-124I155.14
GP2+ M cell, pool3.CNhs13240.11847-124I244.82
Ileum epithelium, pool1.CNhs13199.10252-104B973.16
Ileum epithelium, pool2.CNhs13232.10253-104C157.71
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C864.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F644.22
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G862.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H166.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G982.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H458.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C242.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C346.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C436.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.65
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C124.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C537.13
Mouse Granule cells, donor1.CNhs12131.11713-123C315.38
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C738.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E734.61
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D248.31
Mouse Microglia, donor1.CNhs12629.11718-123C830.86
Mouse Microglia, donor2.CNhs12634.11736-123E846.11
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.30
Mouse Schwann, donor1.CNhs12507.11728-123D919.31
Mouse Schwann, donor2.CNhs12573.11746-123F929.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F740.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.44
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.49
accessory axillary lymph node, adult.CNhs10475.1063-29H933.66
adrenal gland, adult.CNhs10508.49-24D720.93
adrenal gland, embryo E14.CNhs11038.406-44C518.04
adrenal gland, embryo E16.CNhs11004.1254-43D621.62
adrenal gland, embryo E17.CNhs11043.1263-45I119.83
adrenal gland, embryo E18.CNhs11026.1262-18F524.87
adrenal gland, neonate N00.CNhs11191.1311-23C117.99
adrenal gland, neonate N25.CNhs11223.1377-27I320.11
amnion, adult pregnant day17.5.CNhs10488.583-22A828.92
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I217.38
colon, adult.CNhs10468.36-18H752.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D130.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.09
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D522.77
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.15
epididymis, adult.CNhs10490.58-23B224.26
eyeball, adult.CNhs10484.31-12G421.68
eyeball, embryo E12.CNhs11016.345-16C612.36
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D416.43
eyeball, neonate N00.CNhs11207.633-15C613.54
eyeball, neonate N01.CNhs11140.1532-43E718.70
eyeball, neonate N02.CNhs11205.1551-44G817.15
eyeball, neonate N16.CNhs11188.777-19A221.47
forelimb, embryo E11.CNhs10596.335-25E212.07
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E717.80
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B518.11
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.11
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.57
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I913.86
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C615.74
heart, embryo E17.CNhs11025.479-18E515.11
heart, embryo E18.CNhs11030.1283-20G316.63
heart, neonate N00.CNhs11213.639-21E316.81
heart, neonate N03.CNhs11221.1349-25I213.33
heart, neonate N10.CNhs11118.749-24G120.36
heart, neonate N16.CNhs11209.782-15G118.00
heart, neonate N20.CNhs11127.821-26I614.91
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D219.86
hippocampus, adult.CNhs10478.13-16E828.81
hippocampus, neonate N00.CNhs11228.627-43G116.77
intestinal mucosa, adult.CNhs10506.860-29I368.07
intestine, adult.CNhs10496.178-9A330.15
intestine, embryo E12.CNhs11019.1251-16I510.45
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H422.59
intestine, embryo E17.CNhs10582.482-18D333.36
intestine, embryo E18.CNhs10526.1289-20F746.80
intestine, neonate N00.CNhs11126.644-26D146.50
intestine, neonate N01.CNhs11192.1322-23E964.23
intestine, neonate N06.CNhs11102.688-20B856.55
intestine, neonate N07.CNhs11095.720-20F254.91
intestine, neonate N10.CNhs11098.755-23A544.65
intestine, neonate N20.CNhs11187.827-18D148.54
intestine, neonate N25.CNhs11121.1352-25E354.90
intestine, neonate N30.CNhs11131.1384-42G151.78
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I215.27
kidney, embryo E18.CNhs11001.1288-20C714.74
kidney, neonate N00.CNhs11214.646-21G713.26
kidney, neonate N10.CNhs11206.758-6D520.11
kidney, neonate N20.CNhs11113.832-19I124.95
kidney, neonate N25.CNhs11122.1353-25F332.03
kidney, neonate N30.CNhs11203.1385-42H130.97
liver, adult pregnant day01.CNhs10466.508-5B234.39
liver, embryo E12.CNhs10601.355-15F810.18
liver, embryo E13.CNhs10524.378-3H612.19
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F416.38
liver, neonate N03.CNhs11123.1345-25G223.61
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H223.82
liver, neonate N10.CNhs11115.751-24B924.34
liver, neonate N20.CNhs11220.823-25A321.72
liver, neonate N25.CNhs11198.1368-26H125.65
liver, neonate N30.CNhs11106.1382-42D128.95
lung, adult.CNhs10474.28-22B130.48
lung, embryo E12.CNhs10522.354-16G215.16
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C514.26
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A616.75
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A321.04
lung, neonate N10.CNhs11219.750-23E617.38
lung, neonate N20.CNhs11109.822-18A428.51
lung, neonate N25.CNhs11119.1359-25C728.32
lung, neonate N30.CNhs11133.1394-42H231.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C230.99
medulla oblongata, neonate N30.CNhs11200.1396-42A325.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.71
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I720.16
ovary, embryo E18.CNhs11040.505-44H722.61
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F226.91
pancreas, embryo E16.CNhs11003.460-26E526.40
pancreas, embryo E17.CNhs10599.1558-45G324.81
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D822.46
pancreas, neonate N16.CNhs11136.787-43B627.81
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E614.40
pituitary gland, embryo E13.CNhs11009.370-44C722.25
pituitary gland, embryo E14.CNhs11037.398-44A519.50
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F615.87
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I723.00
placenta, adult pregnant day17.CNhs10464.577-18G327.11
prostate, adult.CNhs10470.859-1F842.56
skin, adult.CNhs10492.30-1C315.50
skin, neonate N00.CNhs11124.650-25G414.53
skin, neonate N03.CNhs11215.662-22H314.11
skin, neonate N06.CNhs11097.693-20I521.25
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I144.89
spinal cord, adult.CNhs10505.24-13C923.18
spleen, adult.CNhs10465.25-2G219.48
spleen, embryo E16.CNhs11035.461-43C116.10
spleen, embryo E18.CNhs11011.1271-21F217.41
spleen, neonate N10.CNhs11116.752-24D118.08
spleen, neonate N20.CNhs11112.824-19H114.63
spleen, neonate N25.CNhs11099.1354-25G320.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.95
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D416.85
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C621.62
stomach, neonate N03.CNhs11193.1340-24B826.30
stomach, neonate N07.CNhs11210.718-18A925.29
stomach, neonate N25.CNhs11104.1355-25E439.26
stomach, neonate N30.CNhs11134.1386-42I161.83
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F513.61
testis, embryo E15.CNhs11034.443-27C516.38
testis, embryo E16.CNhs11033.470-26G513.42
testis, embryo E17.CNhs11029.486-18I516.79
testis, embryo E18.CNhs11027.503-18G518.08
testis, neonate N00.CNhs11189.1300-22B715.14
testis, neonate N07.CNhs11222.726-26I412.63
testis, neonate N10.CNhs11204.763-44D916.04
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B521.80
thymus, embryo E14.CNhs11041.402-44I421.89
thymus, embryo E15.CNhs11005.430-45I217.46
thymus, embryo E16.CNhs11002.456-26C522.35
thymus, embryo E17.CNhs10581.478-18C118.26
thymus, embryo E18.CNhs10595.1273-19G424.44
thymus, neonate N02.CNhs11181.1541-43F819.83
thymus, neonate N03.CNhs11137.2104-43C719.94
thymus, neonate N06.CNhs11197.681-26C426.15
thymus, neonate N07.CNhs11211.713-19D322.10
thymus, neonate N10.CNhs11194.748-24E424.30
thymus, neonate N20.CNhs11186.820-7A223.58
thymus, neonate N25.CNhs11125.1362-25G723.76
thymus, neonate N30.CNhs11132.1393-42G233.66
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.58
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F522.33
uterus, adult.CNhs10509.92-27E523.81
vagina, adult.CNhs10502.89-27D522.51
vesicular gland, adult.CNhs10491.51-27F831.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B317.78
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C616.64
whole body, neonate N06.CNhs10515.692-21D117.43
whole body, neonate N10.CNhs10518.761-6B414.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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