Personal tools

FFCP PHASE1:Mm9::chr6:56664815..56664847,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:56664815..56664847,+
|short_description=p2@Avl9
|description=CAGE_peak_2_at_Avl9_5end
|association_with_transcript=-51bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end
|EntrezGene=78937
|EntrezGene=78937
|HGNC=
|HGNC=
|UniProt=Q80U56
|UniProt=Q80U56
|association_with_transcript=-51bp_to_ENSMUST00000031805,NM_030235,uc009cbk.2,uc009cbl.2_5end
|description=CAGE_peak_2_at_Avl9_5end
|id=chr6:56664815..56664847,+
|ontology_enrichment_disease=
|phase1_expression=3.52327463630547,0.697950815278722,0.454999239389536,0.60492842261366,1.00179145989269,0.503637815735669,1.40167584357315,0.387369970324729,1.267098499365,1.40438715793196,0.171217968225505,0.558405112967355,1.02720437958723,0.34968160967599,0,0.607425802169478,0,1.26184866143295,0.548457734422955,0.42438965179803,3.48677489619386,1.19149141441062,0.783599367416806,0.639969691173627,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,1.73310971850765,0.166234645358492,0.612508068787107,2.92972141515835,1.5626706890476,0.523523743973798,1.76469446409304,2.73218193983378,0.971020706062307,1.51076181570693,1.82478476195126,1.46837401729345,0,0.872100625521786,0,0.194429899074283,0.419959264876088,0,1.17447824240415,2.17608642603403,0,2.82985379639542,3.43840127926508,1.03134418455488,7.48570905180512,5.28990979272033,4.43681982454325,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,6.42875596312561,5.40023753326763,5.04779907243317,1.71390590642282,2.20868540951614,5.14461356702807,4.69642807989358,2.75765635983006,2.20231761998777,7.02280359468532,7.21950706304344,3.42904348098504,4.66586982372289,3.64639359389732,5.30447698102624,5.06486349028512,6.57032465440283,4.12480019663135,3.98640706237488,5.21918448310842,1.81742863999642,2.79614772395106,5.79728977403356,0.860423876981386,0,0,0.649776417447669,1.79210754838934,1.40444420131752,0.852151612890289,0.779358013808606,0.35333957451034,1.69012103732017,2.56652954828636,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,2.82040064223167,2.25530924795977,2.74018930480927,1.38369298353635,1.50722640552623,2.58695155698551,1.75933227861546,1.48316980640624,1.01219549843938,2.65383165584962,2.10296904931632,1.54589062922275,2.42437626567611,1.86391761218122,7.31951992528868,6.91174132484402,0.766371165625774,2.39630249011841,3.59941638596045,3.17675567682662,9.8861822007183,4.11750542536764,3.5183218591602,5.21472960576829,5.37002460393694,7.48036960414416,6.16516799657479,2.74966282395854,1.8661045591514,2.27450482590307,2.10441855886474,3.12289063110489,4.36813998423599,3.96136685571768,5.42537344208574,5.57899293040888,6.02134485338794,4.40398105430725,4.13925393182425,2.80238390812695,3.02569728268511,3.69497360744293,4.16471891612392,3.89266148915837,2.78601733217733,3.2925141825271,1.79130840136644,2.1066395619397,3.86021860672073,1.98914449576915,0.828503090142008,2.57978665979206,0.720248245844059,1.42046841351126,1.18058539048442,1.69693824176116,1.39520366850245,2.95100741539581,1.63471479314037,0.822799249567402,1.64167464079095,2.99954595319666,1.46199987425332,2.19550115291051,1.07365135008297,6.09840850835969,6.99751364179134,0.991256348951394,0.528901133327089,2.13288250535234,1.16118335930219,1.54640953586512,0.605050573870028,2.66853652613844,1.52180500890047,0,1.64698954724011,1.00534083520108,0.994782360205754,1.75467678407208,1.79763881730844,0.864552199498777,1.39398891278057,1.70701110857774,1.94222471436539,0,2.24016460629846,1.55161989734101,3.36651935473529,3.35153646758564,1.18088118383682,2.04098346193787,0.987177311374404,1.1858105083486,0.500535317148282,0.393117990226406,1.34917267430912,0.202860121388503,1.20588579876208,0.50925170356284,0.575392274901621,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,1.4351793081753,0.482443521363367,4.24932337383191,0.757965647081939,2.44447464663039,1.86719594352707,2.11221223459652,2.51259386162724,4.76087281772027,2.34160377429359,3.15270288212382,2.43611158613652,2.55127629851979,3.27726629431476,2.24490476425664,1.3018415272336,1.50791283939272,0,1.47529281905711,2.20749397043786,9.47248480927973,8.55645312123083,2.62295912602681,1.26235463602186,1.57754109708128,1.95219372148319,3.87762115919038,2.62865677747807,2.89638276307112,2.54768877709949,2.02405350837447,1.75353514746787,2.76701444562566,8.35435422696698,2.41298144854057,1.06839362200353,3.90928702448583,2.14461159864296,1.32745138339963,1.69946445308487,0.604647113929502,1.13163047853539,1.18120757152309,1.22974059177571,1.80899805217755,1.81766864738753,3.20847640546249,1.26414703174326,1.05418608574999,0,1.36175842301515,3.24109969256358,0.776152102696527,2.7863814554107,2.48276327099183,2.85390108163313,3.1264313914403,1.2178597964584,0.23467170806371,2.75381692122966,1.10264199027481,1.97863503529776,3.22928853391811,2.71408162176701,2.50681922406587,2.79039529566604,0.291480836629851,9.45669040253599,1.02522528478712,1.65109494370578,1.11116716421827,0.753473828018764,1.0935538217682,0.686334519619568,3.39956859987711,1.95932033253121,2.76399947608848,0,1.58167996790568,1.21991680276109,1.62008011232702,1.67270636811575,1.52853794622324,1.07891477107857,1.40510874733071,2.35580347785627,0.388844919875379,1.24267862617385,2.25477175473676,2.0932316446157,1.48912641411388,1.94451188344048,1.93739735216597,3.54807863530634,2.46450201156083,2.3436789271911,2.62148361064277,2.65742532908607,3.74439008135225,0.632022241256357,0.608175645870493,0.513554785824136,1.16928740680016,1.61124026100733,1.39076948346885,1.9231271923195,0.886137163047463,1.11063094942962,1.295515713135,1.31074040677893,1.26695244961678,1.15454209968395,1.05189211963412,1.36038230169127,2.44184548711471,2.78112955489375,2.01461539636894,0.579568782096571,1.12609485270709,2.01466786693992,1.71494703263253,1.00314420807073,1.12950368523413,1.84130094602871,3.43737308063638,2.23409137046794,4.7955776383945,4.5323633843382,3.37511250115903,2.70192721934532,2.71885445390523,4.65984280576638,3.00983307994112,5.1873233542134,3.75613932659095,4.86213434136588,1.67690530102386,2.94149613520023,2.889207461421,2.88449080134452,2.24643446714271,2.02157769411038,3.29523089857312,2.26351609663291,1.87283014939765,2.24088033417042,2.69946704091382,1.42888107384922,3.1288768005111,2.70072908649187,3.70877310722976,1.76638704161277,3.08582327146874,2.48466128623072,3.33810665926249,2.47088908274958,2.63506265162926,2.28459441307527,0.73171189149109,2.89376682581627,2.17286582153379,3.36685362994643,2.37270036248348,2.46261205938909,2.86461730218783,1.54936841185966,2.70069255373598,2.49810577937946,2.33931608445408,2.57845264857958,2.67803664896381,1.54413993383661,2.55054619182464
|phase1_expression=3.52327463630547,0.697950815278722,0.454999239389536,0.60492842261366,1.00179145989269,0.503637815735669,1.40167584357315,0.387369970324729,1.267098499365,1.40438715793196,0.171217968225505,0.558405112967355,1.02720437958723,0.34968160967599,0,0.607425802169478,0,1.26184866143295,0.548457734422955,0.42438965179803,3.48677489619386,1.19149141441062,0.783599367416806,0.639969691173627,0.45881856213434,0.57423196411502,0,0.861884930743556,0.570070258369122,1.51218077855958,0.221730510655305,0.635030673459631,0,0,1.73310971850765,0.166234645358492,0.612508068787107,2.92972141515835,1.5626706890476,0.523523743973798,1.76469446409304,2.73218193983378,0.971020706062307,1.51076181570693,1.82478476195126,1.46837401729345,0,0.872100625521786,0,0.194429899074283,0.419959264876088,0,1.17447824240415,2.17608642603403,0,2.82985379639542,3.43840127926508,1.03134418455488,7.48570905180512,5.28990979272033,4.43681982454325,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,6.42875596312561,5.40023753326763,5.04779907243317,1.71390590642282,2.20868540951614,5.14461356702807,4.69642807989358,2.75765635983006,2.20231761998777,7.02280359468532,7.21950706304344,3.42904348098504,4.66586982372289,3.64639359389732,5.30447698102624,5.06486349028512,6.57032465440283,4.12480019663135,3.98640706237488,5.21918448310842,1.81742863999642,2.79614772395106,5.79728977403356,0.860423876981386,0,0,0.649776417447669,1.79210754838934,1.40444420131752,0.852151612890289,0.779358013808606,0.35333957451034,1.69012103732017,2.56652954828636,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,2.82040064223167,2.25530924795977,2.74018930480927,1.38369298353635,1.50722640552623,2.58695155698551,1.75933227861546,1.48316980640624,1.01219549843938,2.65383165584962,2.10296904931632,1.54589062922275,2.42437626567611,1.86391761218122,7.31951992528868,6.91174132484402,0.766371165625774,2.39630249011841,3.59941638596045,3.17675567682662,9.8861822007183,4.11750542536764,3.5183218591602,5.21472960576829,5.37002460393694,7.48036960414416,6.16516799657479,2.74966282395854,1.8661045591514,2.27450482590307,2.10441855886474,3.12289063110489,4.36813998423599,3.96136685571768,5.42537344208574,5.57899293040888,6.02134485338794,4.40398105430725,4.13925393182425,2.80238390812695,3.02569728268511,3.69497360744293,4.16471891612392,3.89266148915837,2.78601733217733,3.2925141825271,1.79130840136644,2.1066395619397,3.86021860672073,1.98914449576915,0.828503090142008,2.57978665979206,0.720248245844059,1.42046841351126,1.18058539048442,1.69693824176116,1.39520366850245,2.95100741539581,1.63471479314037,0.822799249567402,1.64167464079095,2.99954595319666,1.46199987425332,2.19550115291051,1.07365135008297,6.09840850835969,6.99751364179134,0.991256348951394,0.528901133327089,2.13288250535234,1.16118335930219,1.54640953586512,0.605050573870028,2.66853652613844,1.52180500890047,0,1.64698954724011,1.00534083520108,0.994782360205754,1.75467678407208,1.79763881730844,0.864552199498777,1.39398891278057,1.70701110857774,1.94222471436539,0,2.24016460629846,1.55161989734101,3.36651935473529,3.35153646758564,1.18088118383682,2.04098346193787,0.987177311374404,1.1858105083486,0.500535317148282,0.393117990226406,1.34917267430912,0.202860121388503,1.20588579876208,0.50925170356284,0.575392274901621,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,1.4351793081753,0.482443521363367,4.24932337383191,0.757965647081939,2.44447464663039,1.86719594352707,2.11221223459652,2.51259386162724,4.76087281772027,2.34160377429359,3.15270288212382,2.43611158613652,2.55127629851979,3.27726629431476,2.24490476425664,1.3018415272336,1.50791283939272,0,1.47529281905711,2.20749397043786,9.47248480927973,8.55645312123083,2.62295912602681,1.26235463602186,1.57754109708128,1.95219372148319,3.87762115919038,2.62865677747807,2.89638276307112,2.54768877709949,2.02405350837447,1.75353514746787,2.76701444562566,8.35435422696698,2.41298144854057,1.06839362200353,3.90928702448583,2.14461159864296,1.32745138339963,1.69946445308487,0.604647113929502,1.13163047853539,1.18120757152309,1.22974059177571,1.80899805217755,1.81766864738753,3.20847640546249,1.26414703174326,1.05418608574999,0,1.36175842301515,3.24109969256358,0.776152102696527,2.7863814554107,2.48276327099183,2.85390108163313,3.1264313914403,1.2178597964584,0.23467170806371,2.75381692122966,1.10264199027481,1.97863503529776,3.22928853391811,2.71408162176701,2.50681922406587,2.79039529566604,0.291480836629851,9.45669040253599,1.02522528478712,1.65109494370578,1.11116716421827,0.753473828018764,1.0935538217682,0.686334519619568,3.39956859987711,1.95932033253121,2.76399947608848,0,1.58167996790568,1.21991680276109,1.62008011232702,1.67270636811575,1.52853794622324,1.07891477107857,1.40510874733071,2.35580347785627,0.388844919875379,1.24267862617385,2.25477175473676,2.0932316446157,1.48912641411388,1.94451188344048,1.93739735216597,3.54807863530634,2.46450201156083,2.3436789271911,2.62148361064277,2.65742532908607,3.74439008135225,0.632022241256357,0.608175645870493,0.513554785824136,1.16928740680016,1.61124026100733,1.39076948346885,1.9231271923195,0.886137163047463,1.11063094942962,1.295515713135,1.31074040677893,1.26695244961678,1.15454209968395,1.05189211963412,1.36038230169127,2.44184548711471,2.78112955489375,2.01461539636894,0.579568782096571,1.12609485270709,2.01466786693992,1.71494703263253,1.00314420807073,1.12950368523413,1.84130094602871,3.43737308063638,2.23409137046794,4.7955776383945,4.5323633843382,3.37511250115903,2.70192721934532,2.71885445390523,4.65984280576638,3.00983307994112,5.1873233542134,3.75613932659095,4.86213434136588,1.67690530102386,2.94149613520023,2.889207461421,2.88449080134452,2.24643446714271,2.02157769411038,3.29523089857312,2.26351609663291,1.87283014939765,2.24088033417042,2.69946704091382,1.42888107384922,3.1288768005111,2.70072908649187,3.70877310722976,1.76638704161277,3.08582327146874,2.48466128623072,3.33810665926249,2.47088908274958,2.63506265162926,2.28459441307527,0.73171189149109,2.89376682581627,2.17286582153379,3.36685362994643,2.37270036248348,2.46261205938909,2.86461730218783,1.54936841185966,2.70069255373598,2.49810577937946,2.33931608445408,2.57845264857958,2.67803664896381,1.54413993383661,2.55054619182464
|short_description=p2@Avl9
}}
}}

Revision as of 20:32, 18 April 2012

Short description:p2@Avl9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Avl9_5end
Coexpression cluster:NA
Association with transcript: -51bp_to_ENSMUST00000031805, NM_030235, uc009cbk.2, uc009cbl.2_5end
EntrezGene:Avl9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Avl9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:56664815..56664847,%2B&oldid=949654"