Personal tools

FFCP PHASE1:Mm9::chr8:73132160..73132229,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:73132160..73132229,-
|short_description=p1@Ssbp4
|description=CAGE_peak_1_at_Ssbp4_5end
|association_with_transcript=0bp_to_ENSMUST00000049908,NM_133772,uc009max.2_5end
|EntrezGene=76900
|EntrezGene=76900
|HGNC=
|HGNC=
|UniProt=Q3U4B1
|UniProt=Q3U4B1
|association_with_transcript=0bp_to_ENSMUST00000049908,NM_133772,uc009max.2_5end
|description=CAGE_peak_1_at_Ssbp4_5end
|id=chr8:73132160..73132229,-
|ontology_enrichment_disease=
|phase1_expression=46.7634633545998,4.88565570695105,2.72999543633722,3.32710632437513,2.50447864973174,21.9921846204576,15.6520469199002,30.2148576853288,95.3139648966784,50.7920022118726,66.4325716714959,49.6182828950992,44.3409890521823,41.9617931611187,29.646768801594,29.9663395736942,21.6864182219725,20.6627718309646,20.0187073064379,18.2487550273153,45.4131169406713,20.751808800985,14.6271881917804,12.1594241322989,17.2056960800378,6.31655160526522,10.3382879078178,13.3592164265251,13.6816862008589,11.089325709437,18.8470934057009,69.2183434070998,91.0295885625164,31.6963362030877,25.4189425381122,34.0781022984909,24.7044921077467,43.5272895966384,63.2881629064278,44.4995182377729,25.8821854733646,28.6879103682547,30.1016418879315,25.1793635951155,30.5144562970739,36.7093504323363,118.141092996554,60.1749431610032,68.7617751958897,51.7183531537594,58.5143242394015,99.1892694118304,17.4493910300046,27.5637613964311,40.6673496962381,37.8171370972842,54.154820148425,40.2224231976405,61.9088370230369,64.536899471188,70.9891171926921,73.8681079910708,64.029225320002,196.628088225986,179.973677987189,231.616517472429,144.407253269871,195.18289910335,30.8995044679263,32.9414489529325,29.4454945891935,94.550475837659,72.2240128911776,28.7853378155142,34.7919059796198,38.6071890376209,55.0579404996944,67.6742891851495,62.8250721018036,61.4590100822703,73.922016030747,61.4677777256977,69.7957497503452,77.6612401843718,79.1494923483876,60.9881171930492,64.7791147635918,60.9526187848733,15.7510482133023,33.7804873677331,31.8850937571846,19.7897491705719,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,19.5217743983135,23.68981483835,23.6405264188611,22.2603931941514,22.5349471642689,30.7983545794363,66.2493623237279,120.881339536066,19.4841936910093,22.8023878927589,19.7154533555765,15.8715592809493,24.8580368301285,53.1422857852073,40.5955664632758,34.1001335709598,42.2026359978587,29.8430828294193,32.3368944623188,48.3816376619251,15.8204779349999,26.0278842455841,41.5766959416441,28.3091987407966,28.2677143629304,19.8798853785441,11.1835056730873,35.1336956413857,41.2610012422507,23.5020490791904,38.4606549664004,32.9946502046374,34.3089613097275,65.1589281410979,81.4351073017155,63.8324108733351,67.9653091951801,71.3446125951622,64.8298699025827,67.1678829100517,47.1516254626964,32.4702193292343,54.8408385801074,49.4538361333214,32.2698698547505,41.6122809024586,40.5139792062036,37.2240900054216,38.3045490221976,29.9786105466548,32.5144984222259,26.9051505568576,45.053710522964,30.4460789070189,34.6623714602979,43.6199507530874,26.6925359256574,34.4769644856945,34.5713989165345,46.5740184355274,41.4305780514809,46.065275373534,38.6462359178006,21.3339545711567,22.2799756982041,23.768192112854,20.1233025247429,23.2181793461937,19.4376562238097,20.6955210827863,23.3397859217669,24.1704258700041,24.6839774870221,19.5359282254123,26.99591357877,23.5381979754785,21.735461413814,28.1833479396781,66.2413337977001,40.6473218898173,5.61711931072457,17.982638533121,33.9128318351022,26.9394539358109,22.1652033474001,24.6053900040478,22.6825604721768,19.7834651157062,23.2519240156811,18.1168850196412,20.6094871216221,28.0528625578023,23.7856186285327,32.357498711552,19.0201483889731,21.3081162382173,48.3653147430358,36.4452755225035,32.6852433451933,30.3440478489518,40.1481648436985,43.6946157916685,35.2859877153356,32.9170629994513,24.6488002710958,28.3813477020141,3.85388415213294,32.0342602974901,31.8425572083389,33.2795926329584,22.1117532313468,20.9824128984603,17.3145579211365,23.8787794084173,18.9698215326791,15.1008777253445,21.5652309791032,30.5155577088173,15.601883655728,14.3969960429854,6.99649912735457,11.5786445127208,32.8860678496556,40.3616707071133,25.5855013013981,26.4802333809293,31.6831835189478,30.3186325969687,35.23045885113,40.9780660501378,37.5171642972735,42.5212204125648,42.893332768864,33.2642528872948,37.990696010497,37.1748080554485,58.8086007363162,56.0222854333271,29.5058563811422,27.869611376778,40.6192992669114,44.0715941586684,24.4263068611246,19.1877904675323,40.3850520852809,35.1394869866975,45.023490126155,48.7496347823206,47.9017149277147,42.178403087536,43.7195557808886,37.1164939547366,33.994748903401,66.1921911828922,34.0656204499845,63.7474861128774,50.332070440255,44.047022833667,26.5490276679926,34.2320696978524,38.6974152914881,20.369348613637,30.4160949667196,31.9732553861685,24.8091161441492,41.4428451604356,28.8762876491624,16.7499481705982,12.6502330289999,18.5643977846736,25.8734100372879,32.5910580196672,43.5938764347883,35.5799478152443,34.5813455602433,39.0627710548535,37.6817257178857,55.4126207388571,17.1310346886509,29.8683219917986,9.04166432025344,22.4245304000413,29.063596805263,23.1601631724118,25.5456816166712,18.5479216711919,17.7803310344209,35.4162326840073,32.465467351592,48.5009139713573,30.5570970160024,27.5017947226849,36.3606645737927,26.3094899187501,36.8853193086666,34.4280572716199,33.1679937130617,43.9148484286952,40.3328391815948,23.5850581867144,25.4892604339451,22.5815359695626,17.4690050996942,25.7590901595008,33.9705703031131,35.07529622586,23.5899251391063,19.2615187056947,12.9649375897364,47.6957781880292,48.9757131753009,46.6682852025714,44.0434998059063,39.5357333648421,36.263386741538,40.8841768410003,27.8925856172391,14.2534631287344,10.0810502190253,25.2808896502543,42.1668447803541,35.0244363932061,32.6101265674265,31.5086984374767,29.6035218624085,41.8280164329492,33.3778331414545,28.7754382352221,32.9975472816149,31.3569435775574,33.0382215707761,32.0385432662297,32.258025002113,19.9522737581386,25.9723565447656,29.6952865377365,22.8323078255147,26.6601639764423,67.5656911624255,46.8868158124199,24.0092584568554,22.069172577556,81.3242653368576,76.4139892601914,67.0287750724094,76.474666142941,67.1380869375229,67.2300568676833,70.2023400241078,68.4488228900815,64.3462220757571,53.3293121104374,32.7968018365998,37.1093132262959,35.5125899968599,33.062513521288,29.7650690931735,31.2533964365024,20.224452229947,24.3121367541895,21.1806678330598,21.226565788159,18.5039888919875,27.350819500981,26.0323390766273,28.2991173629522,28.8326054157179,27.1487404031352,27.3487009229859,30.8654752741928,25.549325849805,24.7294185825788,24.0008476669791,24.3141854438292,27.4201618439419,25.1449300773928,24.468438907986,23.1844025623194,23.9635644463332,18.414879800649,27.1608227691724,24.6902599529405,23.4897335885865,29.2558312655423,24.5538625901814,31.6071156019371,29.3218048691335,47.4640098082097,29.0075194472306,33.9496265396311,34.240611440323,30.8827986767322,21.7955765483196
|phase1_expression=46.7634633545998,4.88565570695105,2.72999543633722,3.32710632437513,2.50447864973174,21.9921846204576,15.6520469199002,30.2148576853288,95.3139648966784,50.7920022118726,66.4325716714959,49.6182828950992,44.3409890521823,41.9617931611187,29.646768801594,29.9663395736942,21.6864182219725,20.6627718309646,20.0187073064379,18.2487550273153,45.4131169406713,20.751808800985,14.6271881917804,12.1594241322989,17.2056960800378,6.31655160526522,10.3382879078178,13.3592164265251,13.6816862008589,11.089325709437,18.8470934057009,69.2183434070998,91.0295885625164,31.6963362030877,25.4189425381122,34.0781022984909,24.7044921077467,43.5272895966384,63.2881629064278,44.4995182377729,25.8821854733646,28.6879103682547,30.1016418879315,25.1793635951155,30.5144562970739,36.7093504323363,118.141092996554,60.1749431610032,68.7617751958897,51.7183531537594,58.5143242394015,99.1892694118304,17.4493910300046,27.5637613964311,40.6673496962381,37.8171370972842,54.154820148425,40.2224231976405,61.9088370230369,64.536899471188,70.9891171926921,73.8681079910708,64.029225320002,196.628088225986,179.973677987189,231.616517472429,144.407253269871,195.18289910335,30.8995044679263,32.9414489529325,29.4454945891935,94.550475837659,72.2240128911776,28.7853378155142,34.7919059796198,38.6071890376209,55.0579404996944,67.6742891851495,62.8250721018036,61.4590100822703,73.922016030747,61.4677777256977,69.7957497503452,77.6612401843718,79.1494923483876,60.9881171930492,64.7791147635918,60.9526187848733,15.7510482133023,33.7804873677331,31.8850937571846,19.7897491705719,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,19.5217743983135,23.68981483835,23.6405264188611,22.2603931941514,22.5349471642689,30.7983545794363,66.2493623237279,120.881339536066,19.4841936910093,22.8023878927589,19.7154533555765,15.8715592809493,24.8580368301285,53.1422857852073,40.5955664632758,34.1001335709598,42.2026359978587,29.8430828294193,32.3368944623188,48.3816376619251,15.8204779349999,26.0278842455841,41.5766959416441,28.3091987407966,28.2677143629304,19.8798853785441,11.1835056730873,35.1336956413857,41.2610012422507,23.5020490791904,38.4606549664004,32.9946502046374,34.3089613097275,65.1589281410979,81.4351073017155,63.8324108733351,67.9653091951801,71.3446125951622,64.8298699025827,67.1678829100517,47.1516254626964,32.4702193292343,54.8408385801074,49.4538361333214,32.2698698547505,41.6122809024586,40.5139792062036,37.2240900054216,38.3045490221976,29.9786105466548,32.5144984222259,26.9051505568576,45.053710522964,30.4460789070189,34.6623714602979,43.6199507530874,26.6925359256574,34.4769644856945,34.5713989165345,46.5740184355274,41.4305780514809,46.065275373534,38.6462359178006,21.3339545711567,22.2799756982041,23.768192112854,20.1233025247429,23.2181793461937,19.4376562238097,20.6955210827863,23.3397859217669,24.1704258700041,24.6839774870221,19.5359282254123,26.99591357877,23.5381979754785,21.735461413814,28.1833479396781,66.2413337977001,40.6473218898173,5.61711931072457,17.982638533121,33.9128318351022,26.9394539358109,22.1652033474001,24.6053900040478,22.6825604721768,19.7834651157062,23.2519240156811,18.1168850196412,20.6094871216221,28.0528625578023,23.7856186285327,32.357498711552,19.0201483889731,21.3081162382173,48.3653147430358,36.4452755225035,32.6852433451933,30.3440478489518,40.1481648436985,43.6946157916685,35.2859877153356,32.9170629994513,24.6488002710958,28.3813477020141,3.85388415213294,32.0342602974901,31.8425572083389,33.2795926329584,22.1117532313468,20.9824128984603,17.3145579211365,23.8787794084173,18.9698215326791,15.1008777253445,21.5652309791032,30.5155577088173,15.601883655728,14.3969960429854,6.99649912735457,11.5786445127208,32.8860678496556,40.3616707071133,25.5855013013981,26.4802333809293,31.6831835189478,30.3186325969687,35.23045885113,40.9780660501378,37.5171642972735,42.5212204125648,42.893332768864,33.2642528872948,37.990696010497,37.1748080554485,58.8086007363162,56.0222854333271,29.5058563811422,27.869611376778,40.6192992669114,44.0715941586684,24.4263068611246,19.1877904675323,40.3850520852809,35.1394869866975,45.023490126155,48.7496347823206,47.9017149277147,42.178403087536,43.7195557808886,37.1164939547366,33.994748903401,66.1921911828922,34.0656204499845,63.7474861128774,50.332070440255,44.047022833667,26.5490276679926,34.2320696978524,38.6974152914881,20.369348613637,30.4160949667196,31.9732553861685,24.8091161441492,41.4428451604356,28.8762876491624,16.7499481705982,12.6502330289999,18.5643977846736,25.8734100372879,32.5910580196672,43.5938764347883,35.5799478152443,34.5813455602433,39.0627710548535,37.6817257178857,55.4126207388571,17.1310346886509,29.8683219917986,9.04166432025344,22.4245304000413,29.063596805263,23.1601631724118,25.5456816166712,18.5479216711919,17.7803310344209,35.4162326840073,32.465467351592,48.5009139713573,30.5570970160024,27.5017947226849,36.3606645737927,26.3094899187501,36.8853193086666,34.4280572716199,33.1679937130617,43.9148484286952,40.3328391815948,23.5850581867144,25.4892604339451,22.5815359695626,17.4690050996942,25.7590901595008,33.9705703031131,35.07529622586,23.5899251391063,19.2615187056947,12.9649375897364,47.6957781880292,48.9757131753009,46.6682852025714,44.0434998059063,39.5357333648421,36.263386741538,40.8841768410003,27.8925856172391,14.2534631287344,10.0810502190253,25.2808896502543,42.1668447803541,35.0244363932061,32.6101265674265,31.5086984374767,29.6035218624085,41.8280164329492,33.3778331414545,28.7754382352221,32.9975472816149,31.3569435775574,33.0382215707761,32.0385432662297,32.258025002113,19.9522737581386,25.9723565447656,29.6952865377365,22.8323078255147,26.6601639764423,67.5656911624255,46.8868158124199,24.0092584568554,22.069172577556,81.3242653368576,76.4139892601914,67.0287750724094,76.474666142941,67.1380869375229,67.2300568676833,70.2023400241078,68.4488228900815,64.3462220757571,53.3293121104374,32.7968018365998,37.1093132262959,35.5125899968599,33.062513521288,29.7650690931735,31.2533964365024,20.224452229947,24.3121367541895,21.1806678330598,21.226565788159,18.5039888919875,27.350819500981,26.0323390766273,28.2991173629522,28.8326054157179,27.1487404031352,27.3487009229859,30.8654752741928,25.549325849805,24.7294185825788,24.0008476669791,24.3141854438292,27.4201618439419,25.1449300773928,24.468438907986,23.1844025623194,23.9635644463332,18.414879800649,27.1608227691724,24.6902599529405,23.4897335885865,29.2558312655423,24.5538625901814,31.6071156019371,29.3218048691335,47.4640098082097,29.0075194472306,33.9496265396311,34.240611440323,30.8827986767322,21.7955765483196
|short_description=p1@Ssbp4
}}
}}

Revision as of 01:23, 19 April 2012

Short description:p1@Ssbp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ssbp4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000049908, NM_133772, uc009max.2_5end
EntrezGene:Ssbp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ssbp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G746.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.65
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E795.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F250.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E666.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F149.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A129.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A521.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I213.36
Ileum epithelium, pool1.CNhs13199.10252-104B913.68
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I369.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G691.03
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F634.08
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H163.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H344.50
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7118.14
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C260.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B868.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C351.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C458.51
Mouse Astrocytes, donor3.CNhs12107.11633-122C499.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.45
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C137.82
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E154.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C540.22
Mouse Granule cells, donor1.CNhs12131.11713-123C361.91
Mouse Granule cells, donor2.CNhs12357.11731-123E364.54
Mouse Granule cells, donor3.CNhs12108.11636-122C770.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C673.87
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.03
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7196.63
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7179.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2231.62
Mouse Microglia, donor1.CNhs12629.11718-123C8144.41
Mouse Microglia, donor2.CNhs12634.11736-123E8195.18
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F194.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D572.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.79
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D355.06
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F367.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D762.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D461.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F473.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D861.47
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E469.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E577.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I679.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D660.99
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.95
Mouse Schwann, donor1.CNhs12507.11728-123D915.75
Mouse Schwann, donor2.CNhs12573.11746-123F933.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I866.25
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6120.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.72
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.87
accessory axillary lymph node, adult.CNhs10475.1063-29H924.86
adrenal gland, adult.CNhs10508.49-24D753.14
adrenal gland, embryo E14.CNhs11038.406-44C540.60
adrenal gland, embryo E16.CNhs11004.1254-43D634.10
adrenal gland, embryo E17.CNhs11043.1263-45I142.20
adrenal gland, embryo E18.CNhs11026.1262-18F529.84
adrenal gland, neonate N00.CNhs11191.1311-23C132.34
adrenal gland, neonate N25.CNhs11223.1377-27I348.38
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H126.03
bone (os femoris), adult.CNhs10483.56-12G241.58
bone (os femoris), neonate N02.CNhs11227.1985-43F528.31
bone (os femoris), neonate N16.CNhs11225.1525-43A628.27
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B235.13
cerebellum, neonate N30.CNhs11135.1395-42I241.26
colon, adult.CNhs10468.36-18H723.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.31
corpora quadrigemina, adult.CNhs10501.16-22A465.16
corpus striatum, adult.CNhs10487.19-21D881.44
corpus striatum, neonate N00.CNhs11226.630-43F163.83
cortex, adult.CNhs10473.12-14D567.97
cortex, neonate N30.CNhs11107.1392-42F271.34
diencephalon, adult.CNhs10482.20-12F264.83
diencephalon, neonate N30.CNhs11201.1388-42B267.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.47
epididymis, adult.CNhs10490.58-23B254.84
eyeball, adult.CNhs10484.31-12G449.45
eyeball, embryo E12.CNhs11016.345-16C632.27
eyeball, embryo E14.CNhs10521.399-16E241.61
eyeball, embryo E15.CNhs10593.426-16C940.51
eyeball, embryo E17.CNhs11023.1261-18D437.22
eyeball, neonate N00.CNhs11207.633-15C638.30
eyeball, neonate N01.CNhs11140.1532-43E729.98
eyeball, neonate N02.CNhs11205.1551-44G832.51
eyeball, neonate N16.CNhs11188.777-19A226.91
forelimb, embryo E11.CNhs10596.335-25E245.05
forelimb, embryo E12.CNhs10600.359-14H230.45
forelimb, embryo E13.CNhs10589.384-1E234.66
forelimb, embryo E14.CNhs10577.413-26A843.62
forelimb, embryo E15.CNhs11007.437-20E726.69
forelimb, embryo E17.CNhs10598.1517-43C434.48
forelimb, embryo E18.CNhs11008.1520-43B534.57
gonad, embryo E13.CNhs11044.1564-45I646.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C841.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D246.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D538.65
heart, embryo E11.CNhs10586.331-24E921.33
heart, embryo E12.CNhs11015.353-12F522.28
heart, embryo E13.CNhs11013.376-3I923.77
heart, embryo E14.CNhs10597.403-26D420.12
heart, embryo E15.CNhs11017.431-16C823.22
heart, embryo E16.CNhs11021.457-17C619.44
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G323.34
heart, neonate N00.CNhs11213.639-21E324.17
heart, neonate N03.CNhs11221.1349-25I224.68
heart, neonate N10.CNhs11118.749-24G119.54
heart, neonate N16.CNhs11209.782-15G127.00
heart, neonate N20.CNhs11127.821-26I623.54
heart, neonate N25.CNhs11196.1351-25D321.74
heart, neonate N30.CNhs11202.1390-42D228.18
hippocampus, adult.CNhs10478.13-16E866.24
hippocampus, neonate N00.CNhs11228.627-43G140.65
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A317.98
intestine, embryo E12.CNhs11019.1251-16I533.91
intestine, embryo E13.CNhs11010.381-16D526.94
intestine, embryo E15.CNhs10602.976-16D822.17
intestine, embryo E16.CNhs10585.463-22H424.61
intestine, embryo E17.CNhs10582.482-18D322.68
intestine, embryo E18.CNhs10526.1289-20F719.78
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E918.12
intestine, neonate N06.CNhs11102.688-20B820.61
intestine, neonate N07.CNhs11095.720-20F228.05
intestine, neonate N10.CNhs11098.755-23A523.79
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G121.31
kidney, embryo E14.CNhs10606.411-4I948.37
kidney, embryo E15.CNhs10997.434-16F836.45
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I230.34
kidney, embryo E18.CNhs11001.1288-20C740.15
kidney, neonate N00.CNhs11214.646-21G743.69
kidney, neonate N10.CNhs11206.758-6D535.29
kidney, neonate N20.CNhs11113.832-19I132.92
kidney, neonate N25.CNhs11122.1353-25F324.65
kidney, neonate N30.CNhs11203.1385-42H128.38
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F832.03
liver, embryo E13.CNhs10524.378-3H631.84
liver, embryo E14.CNhs10594.409-16E133.28
liver, embryo E15.CNhs10520.433-16D722.11
liver, embryo E16.CNhs10523.462-17F520.98
liver, embryo E17.CNhs10510.481-18A317.31
liver, embryo E18.CNhs10579.499-43G423.88
liver, neonate N00.CNhs11117.641-24F418.97
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H230.52
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A314.40
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B132.89
lung, embryo E12.CNhs10522.354-16G240.36
lung, embryo E14.CNhs10604.404-26F825.59
lung, embryo E15.CNhs11020.432-17C526.48
lung, embryo E16.CNhs10998.458-17B631.68
lung, embryo E17.CNhs10605.480-44A630.32
lung, embryo E18.CNhs10583.1287-20I635.23
lung, neonate N00.CNhs11224.640-42C640.98
lung, neonate N06.CNhs11212.683-20E537.52
lung, neonate N07.CNhs11111.715-19A342.52
lung, neonate N10.CNhs11219.750-23E642.89
lung, neonate N20.CNhs11109.822-18A433.26
lung, neonate N25.CNhs11119.1359-25C737.99
lung, neonate N30.CNhs11133.1394-42H237.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A156.02
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H227.87
medulla oblongata, adult.CNhs10477.17-12C240.62
medulla oblongata, neonate N30.CNhs11200.1396-42A344.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E140.39
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.14
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D847.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D443.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.99
olfactory brain, adult.CNhs10489.18-22I966.19
ovary, adult.CNhs10507.91-2I734.07
ovary, embryo E18.CNhs11040.505-44H763.75
ovary, neonate N00.CNhs11217.1299-22I450.33
oviduct, adult pregnant day01.CNhs10500.988-6G644.05
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F434.23
pancreas, embryo E15.CNhs11042.1556-45F238.70
pancreas, embryo E16.CNhs11003.460-26E520.37
pancreas, embryo E17.CNhs10599.1558-45G330.42
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G924.81
pancreas, neonate N01.CNhs11138.1531-43D741.44
pancreas, neonate N02.CNhs11139.1539-43D828.88
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E632.59
pituitary gland, embryo E13.CNhs11009.370-44C743.59
pituitary gland, embryo E14.CNhs11037.398-44A535.58
pituitary gland, embryo E15.CNhs10592.427-16B934.58
pituitary gland, embryo E16.CNhs11036.449-43F639.06
pituitary gland, embryo E17.CNhs11039.1265-44F537.68
pituitary gland, neonate N00.CNhs11190.1308-22E955.41
placenta, adult pregnant day10.CNhs10472.539-13I717.13
placenta, adult pregnant day17.CNhs10464.577-18G329.87
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C322.42
skin, neonate N00.CNhs11124.650-25G429.06
skin, neonate N03.CNhs11215.662-22H323.16
skin, neonate N06.CNhs11097.693-20I525.55
skin, neonate N10.CNhs11108.762-6C418.55
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C935.42
spleen, adult.CNhs10465.25-2G232.47
spleen, embryo E16.CNhs11035.461-43C148.50
spleen, embryo E18.CNhs11011.1271-21F230.56
spleen, neonate N10.CNhs11116.752-24D127.50
spleen, neonate N20.CNhs11112.824-19H136.36
spleen, neonate N25.CNhs11099.1354-25G326.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D333.17
stomach, adult.CNhs10503.33-1H643.91
stomach, embryo E12.CNhs10588.356-43E340.33
stomach, embryo E15.CNhs10603.1252-16G823.59
stomach, embryo E16.CNhs11022.459-17D425.49
stomach, embryo E17.CNhs11006.1035-18D522.58
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B825.76
stomach, neonate N07.CNhs11210.718-18A933.97
stomach, neonate N25.CNhs11104.1355-25E435.08
stomach, neonate N30.CNhs11134.1386-42I123.59
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F547.70
testis, embryo E15.CNhs11034.443-27C548.98
testis, embryo E16.CNhs11033.470-26G546.67
testis, embryo E17.CNhs11029.486-18I544.04
testis, embryo E18.CNhs11027.503-18G539.54
testis, neonate N00.CNhs11189.1300-22B736.26
testis, neonate N07.CNhs11222.726-26I440.88
testis, neonate N10.CNhs11204.763-44D927.89
testis, neonate N20.CNhs11110.839-18H314.25
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I442.17
thymus, embryo E15.CNhs11005.430-45I235.02
thymus, embryo E16.CNhs11002.456-26C532.61
thymus, embryo E17.CNhs10581.478-18C131.51
thymus, embryo E18.CNhs10595.1273-19G429.60
thymus, neonate N02.CNhs11181.1541-43F841.83
thymus, neonate N03.CNhs11137.2104-43C733.38
thymus, neonate N06.CNhs11197.681-26C428.78
thymus, neonate N07.CNhs11211.713-19D333.00
thymus, neonate N10.CNhs11194.748-24E431.36
thymus, neonate N20.CNhs11186.820-7A233.04
thymus, neonate N25.CNhs11125.1362-25G732.04
thymus, neonate N30.CNhs11132.1393-42G232.26
tongue, adult.CNhs10499.32-1B419.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H325.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.83
urinary bladder, adult.CNhs10481.879-12E426.66
uterus, adult pregnant day19.CNhs10497.590-15F567.57
uterus, adult.CNhs10509.92-27E546.89
vagina, adult.CNhs10502.89-27D524.01
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A276.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D776.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A467.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A670.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A768.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A864.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.33
whole body, embryo E11.CNhs11014.324-5I832.80
whole body, embryo E12.CNhs10587.857-27C937.11
whole body, embryo E13.CNhs10512.372-23H235.51
whole body, embryo E14.5.CNhs10578.420-27D233.06
whole body, embryo E14.CNhs10519.395-14B129.77
whole body, embryo E16.CNhs10514.453-14F231.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.61
whole body, embryo E17.5.CNhs10513.490-9F929.32
whole body, embryo E17.CNhs10517.475-3I547.46
whole body, embryo E18.CNhs10516.493-3B329.01
whole body, neonate N00.CNhs10525.657-19C233.95
whole body, neonate N01.CNhs10576.659-23C634.24
whole body, neonate N06.CNhs10515.692-21D130.88
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:73132160..73132229,-&oldid=993635"