FFCP PHASE1:Mm9::chr12:56922183..56922194,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 6: | Line 6: | ||
|description=CAGE_peak_3_at_Ralgapa1_5end | |description=CAGE_peak_3_at_Ralgapa1_5end | ||
|id=chr12:56922183..56922194,- | |id=chr12:56922183..56922194,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=0.80074423552397,1.74487703819681,2.27499619694768,2.11724947914781,3.00537437967808,3.02182689441402,0.934450562382103,0.258246646883153,0.281577444303333,0.70219357896598,0.34243593645101,1.03703806693937,0.342401459862411,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0.84877930359606,3.23164502574065,0.496454756004426,0.261199789138935,0.95995453676044,0.45881856213434,1.72269589234506,0.430761996159075,1.29282739611533,0.570070258369122,1.00812051903972,0.221730510655305,0.635030673459631,0,0,1.73310971850765,0.831173226792462,0.612508068787107,2.92972141515835,0.7813353445238,2.61761871986899,2.35292595212406,6.83045484958446,1.94204141212461,0.251793635951155,0.506884656097573,0.734187008646726,0,0,0,0.388859798148567,0.139986421625363,0,0.671130424230945,0.725362142011344,0,0.257259436035947,0,0,2.02316460859598,2.64495489636016,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.24427534770173,0.405017814995072,1.47227472945967,0,1.32521124570968,0.857435594504678,0.958454710182364,1.83843757322004,7.70811166995721,3.70293280447044,2.61131106535614,2.50583946687368,2.37867873366265,1.04182674111352,2.23346399201105,3.37657566019008,2.13917546887534,2.65165726926301,2.13557521198654,3.16879057903011,1.4387976733305,1.36028808192214,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.340860645156116,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,0.79928715803342,1.03575153458869,1.33597925158342,1.56136794089522,0.913396434936424,1.15307748628029,1.20578112442098,0.705532242814229,1.38233250462643,0.741584903203122,1.01219549843938,2.65383165584962,1.13236794963186,0.883366073841574,1.93950101254089,0,5.27005434620785,5.02672096352292,0.510914110417183,0.239630249011841,0,0,5.84183493678809,1.83000241127451,1.63350657746724,3.47648640384553,2.55715457330331,4.1557608911912,1.62241263067758,0.916554274652847,1.24406970610093,0.252722758433675,1.68353484709179,2.08192708740326,1.60931473103431,0.720248519221397,2.10986744970001,1.56483948048054,1.92170580427275,2.52994656311268,3.3631438196072,0.862271971731369,2.26927296201383,1.05570674498369,0.876782929710299,1.94633074457919,1.0447564995665,1.4404749548556,0.995171334092466,0.702213187313235,0.257347907114715,0.284163499395593,1.65700618028402,1.64168241986767,1.2604344302271,0.710234206755631,1.77087808572663,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.656669856316381,1.13496333364198,1.60819986167866,1.09775057645525,0.805238512562231,1.68231958851302,1.02904612379284,0.991256348951394,1.58670339998127,1.49301775374664,1.16118335930219,1.28867461322093,1.21010114774006,1.33426826306922,1.71203063501303,0.474529061544512,0.494096864172033,1.75934646160189,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.814605311381257,1.55161989734101,0.420814919341911,1.26473074248515,1.03327103585722,1.09899109488962,0.616985819609003,0.296452627087149,0.83422552858047,0.982794975566015,1.34917267430912,0.811440485554012,0.964708639009667,1.2731292589071,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,1.29327233116623,1.51593129416388,1.14075483509418,1.01847051465113,1.64283173801951,1.17254380209271,0.238043640886014,0.780534591431195,0.788175720530955,1.10732344824387,0.956728611944923,1.3109065177259,1.55416483679306,1.01254341007058,1.50791283939272,0,1.96705709207614,0.827810238914197,3.05046120976805,3.39913891117389,0,0.757412781613119,0.631016438832513,0.780877488593277,0.646270193198397,0.716906393857656,0.891194696329576,1.13230612315533,1.21443210502468,0.292255857911312,1.18586333383957,3.53453448063988,1.84522110770749,0.712262414669021,0.651547837414304,1.31976098378028,1.32745138339963,0,0.302323556964751,0.943025398779491,0.590603785761546,1.53717573971964,0.516856586336442,0.727067458955011,0,1.58018378967908,0,0,1.36175842301515,0.720244376125241,0,0.857348140126369,0.709360934569094,0.713475270408282,1.81003922662333,0.304464949114599,1.64270195644597,0.847328283455281,0.661585194164886,1.6488625294148,0.807322133479528,1.62844897306021,1.79058516004705,1.64140899745061,0,4.63563255026274,0.854354403989263,0.206386867963223,0.925972636848558,1.31857919903284,1.36694227721025,0.686334519619568,0.339956859987711,0.279902904647316,0.276399947608848,0,1.58167996790568,1.01659733563424,1.18805874903981,2.50905955217362,1.31017538247707,1.34864346384821,0.991841468704031,1.04702376793612,0.777689839750757,0.621339313086926,9.01908701894705,1.04661582230785,0.165458490457098,1.16670713006429,1.16243841129958,0.844780627453891,0.938857909166032,1.3020438484395,4.29923312145414,3.38217769156408,6.04863013141517,0.632022241256357,1.01362607645082,0.718976700153791,0.649604114888975,0.537080087002444,0.596044064343795,0.841368146639782,0.738447635872886,1.21159739937777,0.457240839929999,0.403304740547362,0.487289403698762,0.577271049841977,0.233753804363138,0.906921534460845,0,0.448569283047378,0.167884616364078,1.35232715822533,0.93841237725591,1.28206136987086,3.00115730710692,2.00628841614145,1.12950368523413,2.30162618253588,1.71868654031819,2.57779773515531,0,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,2.07104124700728,1.14166082342594,1.59609949360412,1.36586884603307,0.243106717068294,0.628839487883947,1.83843508450014,0.888986911206461,1.85431551515005,2.24643446714271,2.02157769411038,0.760437899670719,0.943131706930381,1.40462261204824,2.36893063898016,1.66562859971278,1.90517476513229,1.27472758539341,2.31491064556446,2.06042950401653,2.06078488188156,1.02860775715625,1.4198064492747,1.66905332963125,1.30811774969096,1.12931256498397,2.03075058940024,2.37806364734604,2.10455769150274,1.62964936615034,2.24456908663095,1.89816028998679,1.28055827088233,0.818462086339379,1.70430525304563,1.15743966588685,0.999242311751784,1.16965804222704,0.859484216193193,0.382576664137687,1.54413993383661,0.463735671240843 | |phase1_expression=0.80074423552397,1.74487703819681,2.27499619694768,2.11724947914781,3.00537437967808,3.02182689441402,0.934450562382103,0.258246646883153,0.281577444303333,0.70219357896598,0.34243593645101,1.03703806693937,0.342401459862411,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0.84877930359606,3.23164502574065,0.496454756004426,0.261199789138935,0.95995453676044,0.45881856213434,1.72269589234506,0.430761996159075,1.29282739611533,0.570070258369122,1.00812051903972,0.221730510655305,0.635030673459631,0,0,1.73310971850765,0.831173226792462,0.612508068787107,2.92972141515835,0.7813353445238,2.61761871986899,2.35292595212406,6.83045484958446,1.94204141212461,0.251793635951155,0.506884656097573,0.734187008646726,0,0,0,0.388859798148567,0.139986421625363,0,0.671130424230945,0.725362142011344,0,0.257259436035947,0,0,2.02316460859598,2.64495489636016,1.26766280701236,0.677689064138264,0,0.449949858640699,0,0,0,0.384218305321555,1.24427534770173,0.405017814995072,1.47227472945967,0,1.32521124570968,0.857435594504678,0.958454710182364,1.83843757322004,7.70811166995721,3.70293280447044,2.61131106535614,2.50583946687368,2.37867873366265,1.04182674111352,2.23346399201105,3.37657566019008,2.13917546887534,2.65165726926301,2.13557521198654,3.16879057903011,1.4387976733305,1.36028808192214,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.842666520790511,0.340860645156116,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,0.79928715803342,1.03575153458869,1.33597925158342,1.56136794089522,0.913396434936424,1.15307748628029,1.20578112442098,0.705532242814229,1.38233250462643,0.741584903203122,1.01219549843938,2.65383165584962,1.13236794963186,0.883366073841574,1.93950101254089,0,5.27005434620785,5.02672096352292,0.510914110417183,0.239630249011841,0,0,5.84183493678809,1.83000241127451,1.63350657746724,3.47648640384553,2.55715457330331,4.1557608911912,1.62241263067758,0.916554274652847,1.24406970610093,0.252722758433675,1.68353484709179,2.08192708740326,1.60931473103431,0.720248519221397,2.10986744970001,1.56483948048054,1.92170580427275,2.52994656311268,3.3631438196072,0.862271971731369,2.26927296201383,1.05570674498369,0.876782929710299,1.94633074457919,1.0447564995665,1.4404749548556,0.995171334092466,0.702213187313235,0.257347907114715,0.284163499395593,1.65700618028402,1.64168241986767,1.2604344302271,0.710234206755631,1.77087808572663,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.656669856316381,1.13496333364198,1.60819986167866,1.09775057645525,0.805238512562231,1.68231958851302,1.02904612379284,0.991256348951394,1.58670339998127,1.49301775374664,1.16118335930219,1.28867461322093,1.21010114774006,1.33426826306922,1.71203063501303,0.474529061544512,0.494096864172033,1.75934646160189,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.814605311381257,1.55161989734101,0.420814919341911,1.26473074248515,1.03327103585722,1.09899109488962,0.616985819609003,0.296452627087149,0.83422552858047,0.982794975566015,1.34917267430912,0.811440485554012,0.964708639009667,1.2731292589071,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,1.29327233116623,1.51593129416388,1.14075483509418,1.01847051465113,1.64283173801951,1.17254380209271,0.238043640886014,0.780534591431195,0.788175720530955,1.10732344824387,0.956728611944923,1.3109065177259,1.55416483679306,1.01254341007058,1.50791283939272,0,1.96705709207614,0.827810238914197,3.05046120976805,3.39913891117389,0,0.757412781613119,0.631016438832513,0.780877488593277,0.646270193198397,0.716906393857656,0.891194696329576,1.13230612315533,1.21443210502468,0.292255857911312,1.18586333383957,3.53453448063988,1.84522110770749,0.712262414669021,0.651547837414304,1.31976098378028,1.32745138339963,0,0.302323556964751,0.943025398779491,0.590603785761546,1.53717573971964,0.516856586336442,0.727067458955011,0,1.58018378967908,0,0,1.36175842301515,0.720244376125241,0,0.857348140126369,0.709360934569094,0.713475270408282,1.81003922662333,0.304464949114599,1.64270195644597,0.847328283455281,0.661585194164886,1.6488625294148,0.807322133479528,1.62844897306021,1.79058516004705,1.64140899745061,0,4.63563255026274,0.854354403989263,0.206386867963223,0.925972636848558,1.31857919903284,1.36694227721025,0.686334519619568,0.339956859987711,0.279902904647316,0.276399947608848,0,1.58167996790568,1.01659733563424,1.18805874903981,2.50905955217362,1.31017538247707,1.34864346384821,0.991841468704031,1.04702376793612,0.777689839750757,0.621339313086926,9.01908701894705,1.04661582230785,0.165458490457098,1.16670713006429,1.16243841129958,0.844780627453891,0.938857909166032,1.3020438484395,4.29923312145414,3.38217769156408,6.04863013141517,0.632022241256357,1.01362607645082,0.718976700153791,0.649604114888975,0.537080087002444,0.596044064343795,0.841368146639782,0.738447635872886,1.21159739937777,0.457240839929999,0.403304740547362,0.487289403698762,0.577271049841977,0.233753804363138,0.906921534460845,0,0.448569283047378,0.167884616364078,1.35232715822533,0.93841237725591,1.28206136987086,3.00115730710692,2.00628841614145,1.12950368523413,2.30162618253588,1.71868654031819,2.57779773515531,0,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,2.07104124700728,1.14166082342594,1.59609949360412,1.36586884603307,0.243106717068294,0.628839487883947,1.83843508450014,0.888986911206461,1.85431551515005,2.24643446714271,2.02157769411038,0.760437899670719,0.943131706930381,1.40462261204824,2.36893063898016,1.66562859971278,1.90517476513229,1.27472758539341,2.31491064556446,2.06042950401653,2.06078488188156,1.02860775715625,1.4198064492747,1.66905332963125,1.30811774969096,1.12931256498397,2.03075058940024,2.37806364734604,2.10455769150274,1.62964936615034,2.24456908663095,1.89816028998679,1.28055827088233,0.818462086339379,1.70430525304563,1.15743966588685,0.999242311751784,1.16965804222704,0.859484216193193,0.382576664137687,1.54413993383661,0.463735671240843 | ||
|short_description=p3@Ralgapa1 | |short_description=p3@Ralgapa1 | ||
}} | }} | ||
Revision as of 01:08, 18 April 2012
| Short description: | p3@Ralgapa1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Ralgapa1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -29bp_to_ENSMUST00000085385, ENSMUST00000110687, NM_001003719, NM_001112714, NM_019994, uc007nou.1, uc007nov.1, uc007nox.1, uc007noy.1, uc011ymb.1_5end |
| EntrezGene: | Ralgapa1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
