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(Created page with "{{DOID |id=DOID:1192 |name=peripheral nervous system neoplasm |namespace= |def="A nervous system cancer that is located_in the peripheral nervous system." [url:http\://en....")
 
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|id=DOID:1192
|id=DOID:1192
|name=peripheral nervous system neoplasm
|name=peripheral nervous system neoplasm
|namespace=
|namespace=disease_ontology
|def="A nervous system cancer that is located_in the peripheral nervous system." [url:http\://en.wikipedia.org/wiki/Peripheral_nervous_system]
|def="A nervous system cancer that is located_in the peripheral nervous system." [url:http\://en.wikipedia.org/wiki/Peripheral_nervous_system]
|xref=
|xref=MSH:D010524;;NCI:C3321;;SNOMEDCT_2010_1_31:115242003;;SNOMEDCT_2010_1_31:126980002;;SNOMEDCT_2010_1_31:134214003;;SNOMEDCT_2010_1_31:189946005;;SNOMEDCT_2010_1_31:189953001;;UMLS_CUI:C0031118;;UMLS_CUI:C0206727
|is_a=DOID:3093
|is_a=DOID:3093
|synonym="neoplasm of peripheral nerve (disorder)" EXACT [SNOMEDCT_2005_07_31:126980002];;"nerve sheath neoplasm" EXACT [CSP2005:2012-6947];;"nerve sheath tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:115242003];;"nerve sheath tumor [dup] (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:134214003];;"nerve sheath tumor NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189953001];;"nerve sheath tumors" EXACT [];;"tumor of PNS" EXACT [NCI2004_11_17:C3321]
|synonym="neoplasm of peripheral nerve (disorder)" EXACT [SNOMEDCT_2005_07_31:126980002];;"nerve sheath neoplasm" EXACT [CSP2005:2012-6947];;"nerve sheath tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:115242003];;"nerve sheath tumor [dup] (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:134214003];;"nerve sheath tumor NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189953001];;"nerve sheath tumors" EXACT [];;"tumor of PNS" EXACT [NCI2004_11_17:C3321]
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 13:59, 11 June 2012

Name:peripheral nervous system neoplasm
Namespace:disease_ontology
Definition:"A nervous system cancer that is located_in the peripheral nervous system." [url:http\://en.wikipedia.org/wiki/Peripheral_nervous_system]
Xrefs:
links:

MSH:D010524
NCI:C3321
SNOMEDCT_2010_1_31:115242003
SNOMEDCT_2010_1_31:126980002
SNOMEDCT_2010_1_31:134214003
SNOMEDCT_2010_1_31:189946005
SNOMEDCT_2010_1_31:189953001
UMLS_CUI:C0031118

UMLS_CUI:C0206727
Synonyms: "neoplasm of peripheral nerve (disorder)" EXACT [SNOMEDCT_2005_07_31:126980002]
"nerve sheath neoplasm" EXACT [CSP2005:2012-6947]
"nerve sheath tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:115242003]
"nerve sheath tumor [dup] (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:134214003]
"nerve sheath tumor NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189953001]
"nerve sheath tumors" EXACT []
"tumor of PNS" EXACT [NCI2004_11_17:C3321]
Alt_id: DOID:3194

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3093(nervous system cancer)



Children


is a:DOID:2621 (autonomic nervous system neoplasm),DOID:3193 (peripheral nerve sheath neoplasm),DOID:3369 (peripheral primitive neuroectodermal tumor)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1192 (peripheral nervous system neoplasm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.39e-66FFCP PHASE1:Hg19::chr1:21339635..21339636,-#_a0c85c7da8cbb88c6600c9860011e1dcp@chr1:21339635..21339636, -
2.39e-66FFCP PHASE2:Hg19::chr1:21339635..21339636,-#_a0c85c7da8cbb88c6600c9860011e1dcp@chr1:21339635..21339636, -
4.27e-34FFCP PHASE1:Hg19::chr8:12808791..12808798,+#_976af0b08726a227058f2de73d69b93fp28@KIAA1456
4.27e-34FFCP PHASE2:Hg19::chr8:12808791..12808798,+#_976af0b08726a227058f2de73d69b93fp28@KIAA1456
4.27e-34FFCP PHASE1:Hg19::chr8:37824442..37824447,-#_976af0b08726a227058f2de73d69b93fp9@ADRB3
4.27e-34FFCP PHASE2:Hg19::chr8:37824442..37824447,-#_976af0b08726a227058f2de73d69b93fp9@ADRB3
4.27e-34FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_976af0b08726a227058f2de73d69b93fp@chr1:22696471..22696505, -
4.27e-34FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_976af0b08726a227058f2de73d69b93fp@chr1:22696471..22696505, -
5.96e-34FFCP PHASE2:Hg19::chr6:104346803..104346806,-#_b22e3c2dafcd106550ed896ce640cc40p@chr6:104346803..104346806, -
5.96e-34FFCP PHASE1:Hg19::chr7:91509972..91509984,-#_b22e3c2dafcd106550ed896ce640cc40p3@MTERF
5.96e-34FFCP PHASE1:Hg19::chr8:37824009..37824022,-#_b22e3c2dafcd106550ed896ce640cc40p3@ADRB3
5.96e-34FFCP PHASE1:Hg19::chr8:27041770..27041779,+#_b22e3c2dafcd106550ed896ce640cc40p4@ENST00000521408
5.96e-34FFCP PHASE2:Hg19::chr8:40273499..40273504,-#_b22e3c2dafcd106550ed896ce640cc40p@chr8:40273499..40273504, -
5.96e-34FFCP PHASE2:Hg19::chrX:52006984..52006993,+#_b22e3c2dafcd106550ed896ce640cc40p@chrX:52006984..52006993, +
5.96e-34FFCP PHASE1:Hg19::chr6:21203484..21203485,+#_b22e3c2dafcd106550ed896ce640cc40p@chr6:21203484..21203485, +
5.96e-34FFCP PHASE2:Hg19::chr6:21203484..21203485,+#_b22e3c2dafcd106550ed896ce640cc40p@chr6:21203484..21203485, +
5.96e-34FFCP PHASE2:Hg19::chr12:45444635..45444645,-#_b22e3c2dafcd106550ed896ce640cc40p2@AB463567
5.96e-34FFCP PHASE1:Hg19::chr2:242742205..242742253,+#_b22e3c2dafcd106550ed896ce640cc40p@chr2:242742205..242742253, +
5.96e-34FFCP PHASE2:Hg19::chr7:91509972..91509984,-#_b22e3c2dafcd106550ed896ce640cc40p3@MTERF
5.96e-34FFCP PHASE2:Hg19::chr8:37824009..37824022,-#_b22e3c2dafcd106550ed896ce640cc40p3@ADRB3
5.96e-34FFCP PHASE1:Hg19::chr8:37824071..37824078,-#_b22e3c2dafcd106550ed896ce640cc40p5@ADRB3
5.96e-34FFCP PHASE2:Hg19::chr18:56886837..56886844,+#_b22e3c2dafcd106550ed896ce640cc40p@chr18:56886837..56886844, +
5.96e-34FFCP PHASE2:Hg19::chr8:27041770..27041779,+#_b22e3c2dafcd106550ed896ce640cc40p4@ENST00000521408
5.96e-34FFCP PHASE1:Hg19::chr18:56886837..56886844,+#_b22e3c2dafcd106550ed896ce640cc40p@chr18:56886837..56886844, +
5.96e-34FFCP PHASE2:Hg19::chr2:242742205..242742253,+#_b22e3c2dafcd106550ed896ce640cc40p@chr2:242742205..242742253, +
5.96e-34FFCP PHASE1:Hg19::chr12:45444635..45444645,-#_b22e3c2dafcd106550ed896ce640cc40p2@AB463567
5.96e-34FFCP PHASE2:Hg19::chr12:69678255..69678259,+#_b22e3c2dafcd106550ed896ce640cc40p1@ENST00000548895
5.96e-34FFCP PHASE2:Hg19::chr8:37824071..37824078,-#_b22e3c2dafcd106550ed896ce640cc40p5@ADRB3
5.96e-34FFCP PHASE1:Hg19::chr12:69678255..69678259,+#_b22e3c2dafcd106550ed896ce640cc40p1@ENST00000548895
5.96e-34FFCP PHASE1:Hg19::chr4:155299368..155299375,-#_b22e3c2dafcd106550ed896ce640cc40p@chr4:155299368..155299375, -
5.96e-34FFCP PHASE1:Hg19::chr3:193615743..193615750,-#_b22e3c2dafcd106550ed896ce640cc40p@chr3:193615743..193615750, -
5.96e-34FFCP PHASE2:Hg19::chr17:39023472..39023477,-#_b22e3c2dafcd106550ed896ce640cc40p1@KRT12
5.96e-34FFCP PHASE2:Hg19::chr4:155299368..155299375,-#_b22e3c2dafcd106550ed896ce640cc40p@chr4:155299368..155299375, -
5.96e-34FFCP PHASE1:Hg19::chr6:104346803..104346806,-#_b22e3c2dafcd106550ed896ce640cc40p@chr6:104346803..104346806, -
5.96e-34FFCP PHASE1:Hg19::chr17:39023472..39023477,-#_b22e3c2dafcd106550ed896ce640cc40p1@KRT12
5.96e-34FFCP PHASE2:Hg19::chr3:193615743..193615750,-#_b22e3c2dafcd106550ed896ce640cc40p@chr3:193615743..193615750, -
5.96e-34FFCP PHASE1:Hg19::chr8:40273499..40273504,-#_b22e3c2dafcd106550ed896ce640cc40p@chr8:40273499..40273504, -
5.96e-34FFCP PHASE1:Hg19::chrX:52006984..52006993,+#_b22e3c2dafcd106550ed896ce640cc40p@chrX:52006984..52006993, +
1.71e-30FFCP PHASE2:Hg19::chr17:48262286..48262289,-#_9c2f99be6651815e7b4e28a127b96f10p@chr17:48262286..48262289, -
1.71e-30FFCP PHASE1:Hg19::chr17:48262286..48262289,-#_9c2f99be6651815e7b4e28a127b96f10p@chr17:48262286..48262289, -
2.67e-30FFCP PHASE1:Hg19::chrX:606157..606161,+#_df49b40e8ea66b008f659377412114b1p@chrX:606157..606161, +
2.67e-30FFCP PHASE2:Hg19::chrX:606157..606161,+#_df49b40e8ea66b008f659377412114b1p@chrX:606157..606161, +
1.59e-27FFCP PHASE1:Hg19::chr4:39501682..39501693,-#_18d9bb063eb4904b43f3e88b5774e841p24@UGDH
1.59e-27FFCP PHASE2:Hg19::chr4:39501682..39501693,-#_18d9bb063eb4904b43f3e88b5774e841p24@UGDH
2.72e-27FFCP PHASE2:Hg19::chr15:33023519..33023526,+#_a9bff909652430ec085d99486dcb3d53p@chr15:33023519..33023526, +
2.72e-27FFCP PHASE1:Hg19::chr15:33023519..33023526,+#_a9bff909652430ec085d99486dcb3d53p@chr15:33023519..33023526, +
5.5e-25FFCP PHASE1:Hg19::chr5:83670631..83670634,+#_5fa6dd4321fed9dbd16ea328f51a0bebp@chr5:83670631..83670634, +
5.5e-25FFCP PHASE2:Hg19::chr5:83670631..83670634,+#_5fa6dd4321fed9dbd16ea328f51a0bebp@chr5:83670631..83670634, +
6.22e-25FFCP PHASE2:Hg19::chr16:69958959..69958971,+#_f7a03d1087ea0224b0208b7c4b740e96p6@WWP2
6.22e-25FFCP PHASE1:Hg19::chr16:69958959..69958971,+#_f7a03d1087ea0224b0208b7c4b740e96p6@WWP2
2.62e-23FFCP PHASE2:Hg19::chr5:147011082..147011102,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011082..147011102, -
2.62e-23FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_00a68c8d75b7ff8df2313f740ca6dd20p@chr13:38136724..38136726, +
2.62e-23FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_00a68c8d75b7ff8df2313f740ca6dd20p@chr13:38136724..38136726, +
2.62e-23FFCP PHASE1:Hg19::chr8:37824176..37824185,-#_00a68c8d75b7ff8df2313f740ca6dd20p4@ADRB3
2.62e-23FFCP PHASE1:Hg19::chr5:147011027..147011032,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011027..147011032, -
2.62e-23FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_00a68c8d75b7ff8df2313f740ca6dd20p2@KRT12
2.62e-23FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_00a68c8d75b7ff8df2313f740ca6dd20p2@KRT12
2.62e-23FFCP PHASE2:Hg19::chr8:37824176..37824185,-#_00a68c8d75b7ff8df2313f740ca6dd20p4@ADRB3
2.62e-23FFCP PHASE2:Hg19::chr5:147011027..147011032,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011027..147011032, -
2.62e-23FFCP PHASE1:Hg19::chr5:147011039..147011055,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011039..147011055, -
2.62e-23FFCP PHASE2:Hg19::chr19:49915463..49915468,+#_00a68c8d75b7ff8df2313f740ca6dd20p@chr19:49915463..49915468, +
2.62e-23FFCP PHASE1:Hg19::chr19:49915463..49915468,+#_00a68c8d75b7ff8df2313f740ca6dd20p@chr19:49915463..49915468, +
2.62e-23FFCP PHASE2:Hg19::chr5:147011039..147011055,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011039..147011055, -
2.62e-23FFCP PHASE1:Hg19::chr5:147011082..147011102,-#_00a68c8d75b7ff8df2313f740ca6dd20p@chr5:147011082..147011102, -
3.27e-23FFCP PHASE2:Hg19::chr8:37560262..37560269,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr8:37560262..37560269, -
3.27e-23FFCP PHASE1:Hg19::chr20:21087017..21087026,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp3@LINC00237
3.27e-23FFCP PHASE2:Hg19::chr20:21087017..21087026,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp3@LINC00237
3.27e-23FFCP PHASE1:Hg19::chr10:72538478..72538484,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr10:72538478..72538484, -
3.27e-23FFCP PHASE1:Hg19::chrX:2715135..2715149,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chrX:2715135..2715149, +
3.27e-23FFCP PHASE2:Hg19::chrX:2715135..2715149,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chrX:2715135..2715149, +
3.27e-23FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr7:119353807..119353812, -
3.27e-23FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr7:119353807..119353812, -
3.27e-23FFCP PHASE2:Hg19::chr10:72538478..72538484,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr10:72538478..72538484, -
3.27e-23FFCP PHASE1:Hg19::chr8:37560262..37560269,-#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr8:37560262..37560269, -
3.27e-23FFCP PHASE2:Hg19::chr1:114654778..114654823,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr1:114654778..114654823, +
3.27e-23FFCP PHASE1:Hg19::chr1:114654778..114654823,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp@chr1:114654778..114654823, +
3.27e-23FFCP PHASE1:Hg19::chr1:18957380..18957386,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp10@PAX7
3.27e-23FFCP PHASE2:Hg19::chr1:18957380..18957386,+#_8faf8f6e4e5bb1a9a4bbd7852513fefdp10@PAX7
4.09e-23FFCP PHASE2:Hg19::chr8:27009314..27009357,-#_523e4c7437ce7c093c51ed836869babap@chr8:27009314..27009357, -
4.09e-23FFCP PHASE2:Hg19::chr8:144099758..144099767,-#_523e4c7437ce7c093c51ed836869babap4@ENST00000522060
4.09e-23FFCP PHASE2:Hg19::chr17:31624987..31624990,+#_523e4c7437ce7c093c51ed836869babap@chr17:31624987..31624990, +
4.09e-23FFCP PHASE2:Hg19::chr19:48876418..48876427,+#_523e4c7437ce7c093c51ed836869babap@chr19:48876418..48876427, +
4.09e-23FFCP PHASE1:Hg19::chr11:126898086..126898090,-#_523e4c7437ce7c093c51ed836869babap@chr11:126898086..126898090, -
4.09e-23FFCP PHASE1:Hg19::chr19:48876418..48876427,+#_523e4c7437ce7c093c51ed836869babap@chr19:48876418..48876427, +
4.09e-23FFCP PHASE2:Hg19::chr13:33760224..33760234,-#_523e4c7437ce7c093c51ed836869babap15@STARD13
4.09e-23FFCP PHASE1:Hg19::chr9:15885823..15885844,+#_523e4c7437ce7c093c51ed836869babap@chr9:15885823..15885844, +
4.09e-23FFCP PHASE1:Hg19::chr17:31624987..31624990,+#_523e4c7437ce7c093c51ed836869babap@chr17:31624987..31624990, +
4.09e-23FFCP PHASE1:Hg19::chr13:33760224..33760234,-#_523e4c7437ce7c093c51ed836869babap15@STARD13
4.09e-23FFCP PHASE1:Hg19::chr2:212586166..212586168,-#_523e4c7437ce7c093c51ed836869babap@chr2:212586166..212586168, -
4.09e-23FFCP PHASE2:Hg19::chr9:15885823..15885844,+#_523e4c7437ce7c093c51ed836869babap@chr9:15885823..15885844, +
4.09e-23FFCP PHASE2:Hg19::chr2:212586166..212586168,-#_523e4c7437ce7c093c51ed836869babap@chr2:212586166..212586168, -
4.09e-23FFCP PHASE1:Hg19::chr2:4634459..4634466,+#_523e4c7437ce7c093c51ed836869babap@chr2:4634459..4634466, +
4.09e-23FFCP PHASE2:Hg19::chr13:114108187..114108229,-#_523e4c7437ce7c093c51ed836869babap12@ADPRHL1
4.09e-23FFCP PHASE1:Hg19::chr13:114108187..114108229,-#_523e4c7437ce7c093c51ed836869babap12@ADPRHL1
4.09e-23FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_523e4c7437ce7c093c51ed836869babap@chr2:72803155..72803204, -
4.09e-23FFCP PHASE1:Hg19::chr8:128808429..128808430,+#_523e4c7437ce7c093c51ed836869babap@chr8:128808429..128808430, +
4.09e-23FFCP PHASE2:Hg19::chr2:4634459..4634466,+#_523e4c7437ce7c093c51ed836869babap@chr2:4634459..4634466, +
4.09e-23FFCP PHASE1:Hg19::chr2:234699525..234699537,+#_523e4c7437ce7c093c51ed836869babap@chr2:234699525..234699537, +
4.09e-23FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_523e4c7437ce7c093c51ed836869babap@chr2:72803155..72803204, -
4.09e-23FFCP PHASE1:Hg19::chr8:27009314..27009357,-#_523e4c7437ce7c093c51ed836869babap@chr8:27009314..27009357, -

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