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(Created page with "{{CL |id=CL:0000083 |name=epithelial cell of pancreas |namespace=cell |def="An epithelial cell of the pancreas." [GOC:tfm] |xref=BTO:0000028 |is_a=CL:0000066;;CL:0002371...")
 
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{{CL
{{CL
|id=CL:0000083
|id=CL:0000083
|name=epithelial cell of pancreas
|name=exocrine pancreas cell
|namespace=cell
|namespace=efo
|def="An epithelial cell of the pancreas." [GOC:tfm]
|def="An epithelial cell of the pancreas." [GOC:tfm]
|xref=BTO:0000028
|xref=BTO:0000028
|is_a=CL:0000066;;CL:0002371
|is_a=CL:0000066;;CL:0002371;;EFO:0002966
|synonym="epithelial cell of exocrine pancreas" NARROW [];;"exocrine pancreas cell" EXACT []
|synonym=
|comment=
|comment=
|alt_id=
|alt_id=
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|located_in=
|located_in=
|part_of=UBERON:0001264
|part_of=UBERON:0001264
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:36, 15 June 2012

Name:exocrine pancreas cell
Namespace:efo
Definition:"An epithelial cell of the pancreas." [GOC:tfm]
Xrefs:
links:
BTO:0000028


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell),EFO:0002966()
develops_from:CL:0000223(endodermal cell)
part_of:UBERON:0001264(pancreas)



Children


is a:FF:0000130 (pancreatic epithelial cell),CL:0000169 (type B pancreatic cell),CL:0000173 (pancreatic D cell),FF:0100304 (PANC-1 cell),FF:0101521 (pancreatic adenocarcinoma cell line),FF:10438-106E6 (ductal cell carcinoma cell line:KLM-1),FF:10488-107B2 (ductal cell carcinoma cell line:MIA Paca2),FF:10531-107F9 (),FF:10543-107H3 (),FF:10797-110I5 (tubular adenocarcinoma cell line:SUIT-2)
derives from:FF:0103533 (NOR-P1 cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000083 (exocrine pancreas cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.67e-66FFCP PHASE1:Hg19::chr16:57945799..57945809,-#_fca9ef317a80a34a0161fdd8e13f7cb3p@chr16:57945799..57945809, -
4.67e-66FFCP PHASE2:Hg19::chr16:57945799..57945809,-#_fca9ef317a80a34a0161fdd8e13f7cb3p@chr16:57945799..57945809, -
3.1e-50FFCP PHASE2:Hg19::chr2:113425862..113425864,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:113425862..113425864, +
3.1e-50FFCP PHASE1:Hg19::chr8:41052616..41052617,-#_6230535f48d35cc1645301e0abf2b21bp@chr8:41052616..41052617, -
3.1e-50FFCP PHASE1:Hg19::chr2:126468524..126468553,+#_6230535f48d35cc1645301e0abf2b21bp3@ENST00000430692
3.1e-50FFCP PHASE2:Hg19::chr12:79954988..79954992,-#_6230535f48d35cc1645301e0abf2b21bp@chr12:79954988..79954992, -
3.1e-50FFCP PHASE1:Hg19::chr1:98850479..98850511,-#_6230535f48d35cc1645301e0abf2b21bp@chr1:98850479..98850511, -
3.1e-50FFCP PHASE1:Hg19::chr20:58533857..58533867,-#_6230535f48d35cc1645301e0abf2b21bp@chr20:58533857..58533867, -
3.1e-50FFCP PHASE2:Hg19::chr3:189151408..189151415,+#_6230535f48d35cc1645301e0abf2b21bp@chr3:189151408..189151415, +
3.1e-50FFCP PHASE2:Hg19::chr5:57529651..57529657,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529651..57529657, +
3.1e-50FFCP PHASE1:Hg19::chr9:38059452..38059455,-#_6230535f48d35cc1645301e0abf2b21bp@chr9:38059452..38059455, -
3.1e-50FFCP PHASE2:Hg19::chr6:165990105..165990115,-#_6230535f48d35cc1645301e0abf2b21bp10@PDE10A
3.1e-50FFCP PHASE2:Hg19::chr18:2409216..2409225,-#_6230535f48d35cc1645301e0abf2b21bp@chr18:2409216..2409225, -
3.1e-50FFCP PHASE2:Hg19::chr8:41052616..41052617,-#_6230535f48d35cc1645301e0abf2b21bp@chr8:41052616..41052617, -
3.1e-50FFCP PHASE2:Hg19::chr2:126468524..126468553,+#_6230535f48d35cc1645301e0abf2b21bp3@ENST00000430692
3.1e-50FFCP PHASE2:Hg19::chr1:98850479..98850511,-#_6230535f48d35cc1645301e0abf2b21bp@chr1:98850479..98850511, -
3.1e-50FFCP PHASE1:Hg19::chr2:139791188..139791193,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139791188..139791193, +
3.1e-50FFCP PHASE2:Hg19::chr10:114885416..114885423,+#_6230535f48d35cc1645301e0abf2b21bp@chr10:114885416..114885423, +
3.1e-50FFCP PHASE2:Hg19::chr9:38059452..38059455,-#_6230535f48d35cc1645301e0abf2b21bp@chr9:38059452..38059455, -
3.1e-50FFCP PHASE2:Hg19::chr20:58533857..58533867,-#_6230535f48d35cc1645301e0abf2b21bp@chr20:58533857..58533867, -
3.1e-50FFCP PHASE1:Hg19::chr5:57529696..57529706,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529696..57529706, +
3.1e-50FFCP PHASE1:Hg19::chr2:109605568..109605573,-#_6230535f48d35cc1645301e0abf2b21bp6@EDAR
3.1e-50FFCP PHASE1:Hg19::chr2:196278203..196278206,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:196278203..196278206, +
3.1e-50FFCP PHASE1:Hg19::chr6:165990158..165990169,-#_6230535f48d35cc1645301e0abf2b21bp12@PDE10A
3.1e-50FFCP PHASE2:Hg19::chr2:139791188..139791193,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139791188..139791193, +
3.1e-50FFCP PHASE1:Hg19::chr20:42980646..42980651,+#_6230535f48d35cc1645301e0abf2b21bp@chr20:42980646..42980651, +
3.1e-50FFCP PHASE2:Hg19::chr2:109605568..109605573,-#_6230535f48d35cc1645301e0abf2b21bp6@EDAR
3.1e-50FFCP PHASE2:Hg19::chr2:196278203..196278206,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:196278203..196278206, +
3.1e-50FFCP PHASE2:Hg19::chr5:57529696..57529706,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529696..57529706, +
3.1e-50FFCP PHASE2:Hg19::chr6:165990158..165990169,-#_6230535f48d35cc1645301e0abf2b21bp12@PDE10A
3.1e-50FFCP PHASE2:Hg19::chr20:42980646..42980651,+#_6230535f48d35cc1645301e0abf2b21bp@chr20:42980646..42980651, +
3.1e-50FFCP PHASE1:Hg19::chr3:189028187..189028196,+#_6230535f48d35cc1645301e0abf2b21bp@chr3:189028187..189028196, +
3.1e-50FFCP PHASE1:Hg19::chr11:65144695..65144697,-#_6230535f48d35cc1645301e0abf2b21bp@chr11:65144695..65144697, -
3.1e-50FFCP PHASE1:Hg19::chr5:57529719..57529726,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529719..57529726, +
3.1e-50FFCP PHASE2:Hg19::chr3:189028187..189028196,+#_6230535f48d35cc1645301e0abf2b21bp@chr3:189028187..189028196, +
3.1e-50FFCP PHASE1:Hg19::chr2:196278365..196278367,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:196278365..196278367, +
3.1e-50FFCP PHASE1:Hg19::chr7:45928212..45928215,+#_6230535f48d35cc1645301e0abf2b21bp14@IGFBP1
3.1e-50FFCP PHASE1:Hg19::chr5:27707697..27707707,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:27707697..27707707, +
3.1e-50FFCP PHASE1:Hg19::chr16:1128952..1128957,+#_6230535f48d35cc1645301e0abf2b21bp4@SSTR5
3.1e-50FFCP PHASE2:Hg19::chr2:196278365..196278367,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:196278365..196278367, +
3.1e-50FFCP PHASE2:Hg19::chr5:57529719..57529726,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529719..57529726, +
3.1e-50FFCP PHASE1:Hg19::chr1:163063326..163063330,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:163063326..163063330, +
3.1e-50FFCP PHASE2:Hg19::chr11:65144695..65144697,-#_6230535f48d35cc1645301e0abf2b21bp@chr11:65144695..65144697, -
3.1e-50FFCP PHASE2:Hg19::chr7:45928212..45928215,+#_6230535f48d35cc1645301e0abf2b21bp14@IGFBP1
3.1e-50FFCP PHASE2:Hg19::chr5:27707697..27707707,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:27707697..27707707, +
3.1e-50FFCP PHASE1:Hg19::chr4:81224883..81224888,+#_6230535f48d35cc1645301e0abf2b21bp@chr4:81224883..81224888, +
3.1e-50FFCP PHASE1:Hg19::chr2:139791292..139791303,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139791292..139791303, +
3.1e-50FFCP PHASE1:Hg19::chr2:114004420..114004422,-#_6230535f48d35cc1645301e0abf2b21bp@chr2:114004420..114004422, -
3.1e-50FFCP PHASE2:Hg19::chr16:1128952..1128957,+#_6230535f48d35cc1645301e0abf2b21bp4@SSTR5
3.1e-50FFCP PHASE1:Hg19::chr1:162724324..162724330,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:162724324..162724330, +
3.1e-50FFCP PHASE1:Hg19::chr11:13895146..13895156,+#_6230535f48d35cc1645301e0abf2b21bp@chr11:13895146..13895156, +
3.1e-50FFCP PHASE2:Hg19::chr4:81224883..81224888,+#_6230535f48d35cc1645301e0abf2b21bp@chr4:81224883..81224888, +
3.1e-50FFCP PHASE2:Hg19::chr2:139791292..139791303,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139791292..139791303, +
3.1e-50FFCP PHASE2:Hg19::chr2:114004420..114004422,-#_6230535f48d35cc1645301e0abf2b21bp@chr2:114004420..114004422, -
3.1e-50FFCP PHASE1:Hg19::chr16:1129001..1129004,+#_6230535f48d35cc1645301e0abf2b21bp6@SSTR5
3.1e-50FFCP PHASE2:Hg19::chr1:163063326..163063330,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:163063326..163063330, +
3.1e-50FFCP PHASE2:Hg19::chr11:13895146..13895156,+#_6230535f48d35cc1645301e0abf2b21bp@chr11:13895146..13895156, +
3.1e-50FFCP PHASE1:Hg19::chr18:2409216..2409225,-#_6230535f48d35cc1645301e0abf2b21bp@chr18:2409216..2409225, -
3.1e-50FFCP PHASE1:Hg19::chr1:98779728..98779733,-#_6230535f48d35cc1645301e0abf2b21bp@chr1:98779728..98779733, -
3.1e-50FFCP PHASE2:Hg19::chr16:1129001..1129004,+#_6230535f48d35cc1645301e0abf2b21bp6@SSTR5
3.1e-50FFCP PHASE1:Hg19::chr1:78001338..78001348,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:78001338..78001348, +
3.1e-50FFCP PHASE1:Hg19::chr3:83659759..83659783,-#_6230535f48d35cc1645301e0abf2b21bp@chr3:83659759..83659783, -
3.1e-50FFCP PHASE1:Hg19::chr12:79954988..79954992,-#_6230535f48d35cc1645301e0abf2b21bp@chr12:79954988..79954992, -
3.1e-50FFCP PHASE2:Hg19::chr1:162724324..162724330,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:162724324..162724330, +
3.1e-50FFCP PHASE2:Hg19::chr1:98779728..98779733,-#_6230535f48d35cc1645301e0abf2b21bp@chr1:98779728..98779733, -
3.1e-50FFCP PHASE1:Hg19::chr2:139757287..139757309,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139757287..139757309, +
3.1e-50FFCP PHASE2:Hg19::chr1:78001338..78001348,+#_6230535f48d35cc1645301e0abf2b21bp@chr1:78001338..78001348, +
3.1e-50FFCP PHASE1:Hg19::chr2:113425862..113425864,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:113425862..113425864, +
3.1e-50FFCP PHASE2:Hg19::chr3:83659759..83659783,-#_6230535f48d35cc1645301e0abf2b21bp@chr3:83659759..83659783, -
3.1e-50FFCP PHASE1:Hg19::chr5:57529651..57529657,+#_6230535f48d35cc1645301e0abf2b21bp@chr5:57529651..57529657, +
3.1e-50FFCP PHASE1:Hg19::chr3:189151408..189151415,+#_6230535f48d35cc1645301e0abf2b21bp@chr3:189151408..189151415, +
3.1e-50FFCP PHASE1:Hg19::chr6:165990105..165990115,-#_6230535f48d35cc1645301e0abf2b21bp10@PDE10A
3.1e-50FFCP PHASE1:Hg19::chr10:114885416..114885423,+#_6230535f48d35cc1645301e0abf2b21bp@chr10:114885416..114885423, +
3.1e-50FFCP PHASE2:Hg19::chr2:139757287..139757309,+#_6230535f48d35cc1645301e0abf2b21bp@chr2:139757287..139757309, +
4.94e-40FFCP PHASE2:Hg19::chr20:42780550..42780563,+#_5a2f9fab40a45219269d16e1620e477dp@chr20:42780550..42780563, +
4.94e-40FFCP PHASE1:Hg19::chr20:42780550..42780563,+#_5a2f9fab40a45219269d16e1620e477dp@chr20:42780550..42780563, +
9.88e-34FFCP PHASE1:Hg19::chr2:71277301..71277315,+#_78d161595d588afc56a9f39e6e004e00p@chr2:71277301..71277315, +
9.88e-34FFCP PHASE1:Hg19::chr3:133174860..133174888,-#_78d161595d588afc56a9f39e6e004e00p1@ENST00000515542, p1@uc003epo.2
9.88e-34FFCP PHASE2:Hg19::chr2:71277301..71277315,+#_78d161595d588afc56a9f39e6e004e00p@chr2:71277301..71277315, +
9.88e-34FFCP PHASE2:Hg19::chr3:133174860..133174888,-#_78d161595d588afc56a9f39e6e004e00p1@ENST00000515542, p1@uc003epo.2
5.56e-26FFCP PHASE1:Hg19::chr13:99405077..99405084,-#_52fbafc5d72d178d3db1edb1bcc870f1p5@SLC15A1
5.56e-26FFCP PHASE1:Hg19::chr11:119056147..119056152,+#_52fbafc5d72d178d3db1edb1bcc870f1p3@PDZD3
5.56e-26FFCP PHASE2:Hg19::chr12:78224442..78224455,+#_52fbafc5d72d178d3db1edb1bcc870f1p26@NAV3
5.56e-26FFCP PHASE2:Hg19::chr13:99405077..99405084,-#_52fbafc5d72d178d3db1edb1bcc870f1p5@SLC15A1
5.56e-26FFCP PHASE1:Hg19::chr3:188993877..188993894,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr3:188993877..188993894, +
5.56e-26FFCP PHASE1:Hg19::chr5:27707663..27707672,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr5:27707663..27707672, +
5.56e-26FFCP PHASE2:Hg19::chr11:119056147..119056152,+#_52fbafc5d72d178d3db1edb1bcc870f1p3@PDZD3
5.56e-26FFCP PHASE2:Hg19::chr15:35795980..35795985,-#_52fbafc5d72d178d3db1edb1bcc870f1p@chr15:35795980..35795985, -
5.56e-26FFCP PHASE1:Hg19::chr20:58533868..58533877,-#_52fbafc5d72d178d3db1edb1bcc870f1p@chr20:58533868..58533877, -
5.56e-26FFCP PHASE1:Hg19::chr3:138103078..138103094,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr3:138103078..138103094, +
5.56e-26FFCP PHASE2:Hg19::chr3:188993877..188993894,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr3:188993877..188993894, +
5.56e-26FFCP PHASE1:Hg19::chr4:93623257..93623261,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr4:93623257..93623261, +
5.56e-26FFCP PHASE2:Hg19::chr5:27707663..27707672,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr5:27707663..27707672, +
5.56e-26FFCP PHASE1:Hg19::chr12:71771004..71771010,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr12:71771004..71771010, +
5.56e-26FFCP PHASE1:Hg19::chr2:139791209..139791219,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr2:139791209..139791219, +
5.56e-26FFCP PHASE1:Hg19::chr19:54274746..54274752,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr19:54274746..54274752, +
5.56e-26FFCP PHASE2:Hg19::chr3:138103078..138103094,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr3:138103078..138103094, +
5.56e-26FFCP PHASE2:Hg19::chr20:58533868..58533877,-#_52fbafc5d72d178d3db1edb1bcc870f1p@chr20:58533868..58533877, -
5.56e-26FFCP PHASE2:Hg19::chr4:93623257..93623261,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr4:93623257..93623261, +
5.56e-26FFCP PHASE1:Hg19::chr13:63967430..63967434,+#_52fbafc5d72d178d3db1edb1bcc870f1p@chr13:63967430..63967434, +

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