Personal tools

FFCP PHASE1:Mm9::chr5:152453731..152453788,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Rfc3_5end
|description=CAGE_peak_1_at_Rfc3_5end
|id=chr5:152453731..152453788,-
|id=chr5:152453731..152453788,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=14.0930985452219,3.83872948403297,2.27499619694768,0.90739263392049,3.50627010962443,9.23335995515394,10.2789561862031,4.26106967357202,11.403886494285,10.0647746318457,5.13653904676515,6.38177271962691,4.10881751834894,2.97229368224591,26.648780945253,23.6896062846096,52.467140859611,14.1957974411207,10.4206969540361,19.0975343309114,8.33424243480484,22.539045922601,26.1199789138935,10.239515058778,10.0940083669555,4.01962374880514,7.75371593086335,8.18790684206378,11.5914285868388,9.32511480111744,11.7517170647311,20.9560122241678,17.221814052368,0,32.640233031894,39.0651416592457,37.1588228397512,7.95210098400125,16.4080422349998,10.470474879476,2.35292595212406,7.5135003345429,7.2826552954673,5.91715044485213,7.70464677268311,6.42413632565885,1.56478268869608,5.45062890951116,3.29529274101708,3.30530828426282,6.29938897314131,5.75010257459886,16.1071301815427,10.1550699881588,7.05796978199174,8.7468208252222,3.72493471920384,4.12537673821954,19.8270131642406,16.9277113367051,12.0427966666174,3.38844532069132,7.11435836888911,5.84934816232909,9.88866362566974,6.3943210345149,3.29560121570245,7.30014780110954,20.7379224616955,22.4109857630606,21.0324961351382,6.28432165688368,9.718215801871,26.3355218312151,32.0123873200909,34.9303138911808,4.40463523997555,4.21368215681119,2.91852413186863,15.8263545276233,18.1145534332771,19.7947080811569,6.70039197603314,5.6276261003168,5.19514042441154,6.77645746589436,13.9524247183121,16.4031512326265,5.14938114665652,8.46401473195998,4.05810284182349,9.46466264679525,6.79971333707751,3.77792234146472,1.94932925234301,3.13618820968135,8.42666520790511,12.6118438707763,16.6263042945836,15.1936017039446,9.43650912503759,11.5493829672886,2.54805239706646,0,18.6182295269644,17.7351905832569,15.1657333504435,6.39429726426736,7.50919862576798,2.67195850316685,24.4614310740252,13.3964810457342,12.4532368518272,16.7302131013411,13.0523464920632,6.40899615781345,4.20231445148436,1.44599356919912,11.4999371753484,11.1619126463712,15.0172232553068,15.5160081003271,1.86391761218122,2.92780797011547,4.1889341362691,7.15279754584056,25.1611761462433,36.5940665905979,23.1267813272978,3.74476598512057,2.28750301409313,15.9581027183338,1.56441888173049,2.04572365864264,2.0778804455956,2.43361894601636,18.8402823123085,11.5698482667387,5.05445516867349,2.31486041475121,31.2289063110489,24.5995251743816,19.9868964083938,19.1395118651358,15.6483948048054,18.9608306021578,12.1812241927647,3.10444044886819,41.3890546431057,29.1223363458442,19.7065259063623,14.4669183402199,17.5169767012127,10.0993128291428,12.1411460480687,29.855140022774,33.004019803722,21.8745721047508,26.9955324425813,19.4698226183372,20.8728193383176,18.3663302690235,13.0209604571866,14.5605531493079,14.0383072727514,10.2314935690179,13.413670069981,7.94004328096752,11.3546296440302,7.22336841948019,2.43206428637567,1.75439984910399,3.07370161407471,2.14730270016595,3.15434922846191,11.5253165864799,3.30418782983798,10.0491215332147,37.1121555931307,20.9013004674395,14.0465532841082,12.9077455758939,8.45036566610507,9.89173255785308,9.96511029243474,8.89374355509659,10.8074139784116,12.1363447945102,11.1129529657898,4.49409704327111,8.64552199498777,9.95706366271836,33.7608863696485,25.2489212867501,27.0498565615393,18.7359221617689,16.2920089220806,13.1855341393799,9.42224403151434,3.54264355151045,6.59394656933774,4.81248939295022,3.26097889795864,24.6930756459819,21.2283714722259,20.4624522270217,20.4888722602388,21.2235900582127,15.786802810448,8.91858026097513,11.5116011010275,24.7105271869273,10.0637744569148,12.6527922207291,12.793544597697,7.57736633841335,6.99649912735457,4.82443521363367,5.17308932466493,30.1291344715071,26.7262561364922,21.2181357218985,20.4180516010997,12.3954630506944,6.42717830392237,4.87834119644497,11.0344600874334,12.4020226203314,7.81328366421687,3.93271955317771,6.73471429276993,4.19482269886384,12.0633027151418,7.61467957346193,5.90117127622843,6.62248191131358,3.37156238974363,3.39913891117389,16.8852993737976,2.01976741763498,19.2460013843917,24.9880796349849,28.0050417052639,20.790285421872,15.5959071857676,9.6246020468203,28.3367491172426,18.4121190484126,11.8586333383957,3.21321316421807,5.39372323791421,19.4091507997308,15.8000350572969,4.78413356620353,0,25.2491861601181,22.0696196584268,13.013750503157,7.08724542913855,7.68587869859819,8.78656196771952,12.3601468022352,14.9728898921583,4.10847785316561,3.16255825724996,2.06271086496374,8.17055053809091,27.3692862927592,31.1754427916438,19.9333442579381,11.8817956540323,18.0152505778091,14.4803138129866,14.6143175575008,8.68285319835728,3.81297727554876,2.64634077665954,2.63818004706368,9.68786560175433,12.0625849856312,10.3853939282729,7.2221995887827,12.2421951384537,1.8542530201051,19.9918930533488,20.6386867963223,20.9269815927774,34.2830591748538,35.2671107520245,23.3353736670653,15.8079939894285,19.0333975160175,18.7951964374016,3.81868247206045,26.5722234608154,19.3153493770506,19.008939984637,16.517975385143,14.4119292072477,14.8350781023303,11.1582165229204,7.0674104335688,8.42497326396654,3.10669656543463,17.4744810992099,23.7731308209926,28.9552358299921,23.5285937896298,23.5070878729471,22.3022085647827,20.8895884789442,17.7077963387772,20.1329941297365,16.6693043369944,25.3466405506922,18.0126338758062,34.2605613840378,29.8888885349647,28.3227394091593,24.526657306445,18.4773659946576,27.5247579400729,25.5502882012019,25.2416124870369,23.62411006305,20.3668893976418,14.6186821109629,17.7029788618206,13.3239668486989,1.13365191807606,11.9872414821995,13.8159339178593,9.40153851638839,6.95482538515886,4.31669693537719,5.49454872801795,7.07415650960917,3.00943262421218,1.6942555278512,2.30162618253588,2.86447756719698,1.20297227640581,2.05524755931193,0.755393897389701,2.02506750069542,3.60256962579376,3.62513927187364,4.14208249401456,34.8725487882834,12.768795948833,29.5369137954652,13.1277627216879,15.9306003597267,9.19217542250071,10.0011027510727,7.0051919461224,9.30665707816264,10.6132828940795,5.0695859978048,8.86543804514558,9.17686773204848,8.1311943554184,9.76402972245426,9.52587382566147,9.27074607558844,10.0312794641127,11.9504911232959,11.9231125308862,8.22886205724997,8.87379030796687,9.0605752179982,8.86613141457204,10.1638130848557,8.96914843651771,8.78054269789308,10.7858581689516,11.81495790459,10.1005608898393,7.23673610557462,9.65343927280522,5.32000356120596,8.36658942404216,7.9091710502268,9.99242311751784,8.18760629558929,6.23126056740065,7.07766828654721,5.07360263974886,7.65163857547391
|phase1_expression=14.0930985452219,3.83872948403297,2.27499619694768,0.90739263392049,3.50627010962443,9.23335995515394,10.2789561862031,4.26106967357202,11.403886494285,10.0647746318457,5.13653904676515,6.38177271962691,4.10881751834894,2.97229368224591,26.648780945253,23.6896062846096,52.467140859611,14.1957974411207,10.4206969540361,19.0975343309114,8.33424243480484,22.539045922601,26.1199789138935,10.239515058778,10.0940083669555,4.01962374880514,7.75371593086335,8.18790684206378,11.5914285868388,9.32511480111744,11.7517170647311,20.9560122241678,17.221814052368,0,32.640233031894,39.0651416592457,37.1588228397512,7.95210098400125,16.4080422349998,10.470474879476,2.35292595212406,7.5135003345429,7.2826552954673,5.91715044485213,7.70464677268311,6.42413632565885,1.56478268869608,5.45062890951116,3.29529274101708,3.30530828426282,6.29938897314131,5.75010257459886,16.1071301815427,10.1550699881588,7.05796978199174,8.7468208252222,3.72493471920384,4.12537673821954,19.8270131642406,16.9277113367051,12.0427966666174,3.38844532069132,7.11435836888911,5.84934816232909,9.88866362566974,6.3943210345149,3.29560121570245,7.30014780110954,20.7379224616955,22.4109857630606,21.0324961351382,6.28432165688368,9.718215801871,26.3355218312151,32.0123873200909,34.9303138911808,4.40463523997555,4.21368215681119,2.91852413186863,15.8263545276233,18.1145534332771,19.7947080811569,6.70039197603314,5.6276261003168,5.19514042441154,6.77645746589436,13.9524247183121,16.4031512326265,5.14938114665652,8.46401473195998,4.05810284182349,9.46466264679525,6.79971333707751,3.77792234146472,1.94932925234301,3.13618820968135,8.42666520790511,12.6118438707763,16.6263042945836,15.1936017039446,9.43650912503759,11.5493829672886,2.54805239706646,0,18.6182295269644,17.7351905832569,15.1657333504435,6.39429726426736,7.50919862576798,2.67195850316685,24.4614310740252,13.3964810457342,12.4532368518272,16.7302131013411,13.0523464920632,6.40899615781345,4.20231445148436,1.44599356919912,11.4999371753484,11.1619126463712,15.0172232553068,15.5160081003271,1.86391761218122,2.92780797011547,4.1889341362691,7.15279754584056,25.1611761462433,36.5940665905979,23.1267813272978,3.74476598512057,2.28750301409313,15.9581027183338,1.56441888173049,2.04572365864264,2.0778804455956,2.43361894601636,18.8402823123085,11.5698482667387,5.05445516867349,2.31486041475121,31.2289063110489,24.5995251743816,19.9868964083938,19.1395118651358,15.6483948048054,18.9608306021578,12.1812241927647,3.10444044886819,41.3890546431057,29.1223363458442,19.7065259063623,14.4669183402199,17.5169767012127,10.0993128291428,12.1411460480687,29.855140022774,33.004019803722,21.8745721047508,26.9955324425813,19.4698226183372,20.8728193383176,18.3663302690235,13.0209604571866,14.5605531493079,14.0383072727514,10.2314935690179,13.413670069981,7.94004328096752,11.3546296440302,7.22336841948019,2.43206428637567,1.75439984910399,3.07370161407471,2.14730270016595,3.15434922846191,11.5253165864799,3.30418782983798,10.0491215332147,37.1121555931307,20.9013004674395,14.0465532841082,12.9077455758939,8.45036566610507,9.89173255785308,9.96511029243474,8.89374355509659,10.8074139784116,12.1363447945102,11.1129529657898,4.49409704327111,8.64552199498777,9.95706366271836,33.7608863696485,25.2489212867501,27.0498565615393,18.7359221617689,16.2920089220806,13.1855341393799,9.42224403151434,3.54264355151045,6.59394656933774,4.81248939295022,3.26097889795864,24.6930756459819,21.2283714722259,20.4624522270217,20.4888722602388,21.2235900582127,15.786802810448,8.91858026097513,11.5116011010275,24.7105271869273,10.0637744569148,12.6527922207291,12.793544597697,7.57736633841335,6.99649912735457,4.82443521363367,5.17308932466493,30.1291344715071,26.7262561364922,21.2181357218985,20.4180516010997,12.3954630506944,6.42717830392237,4.87834119644497,11.0344600874334,12.4020226203314,7.81328366421687,3.93271955317771,6.73471429276993,4.19482269886384,12.0633027151418,7.61467957346193,5.90117127622843,6.62248191131358,3.37156238974363,3.39913891117389,16.8852993737976,2.01976741763498,19.2460013843917,24.9880796349849,28.0050417052639,20.790285421872,15.5959071857676,9.6246020468203,28.3367491172426,18.4121190484126,11.8586333383957,3.21321316421807,5.39372323791421,19.4091507997308,15.8000350572969,4.78413356620353,0,25.2491861601181,22.0696196584268,13.013750503157,7.08724542913855,7.68587869859819,8.78656196771952,12.3601468022352,14.9728898921583,4.10847785316561,3.16255825724996,2.06271086496374,8.17055053809091,27.3692862927592,31.1754427916438,19.9333442579381,11.8817956540323,18.0152505778091,14.4803138129866,14.6143175575008,8.68285319835728,3.81297727554876,2.64634077665954,2.63818004706368,9.68786560175433,12.0625849856312,10.3853939282729,7.2221995887827,12.2421951384537,1.8542530201051,19.9918930533488,20.6386867963223,20.9269815927774,34.2830591748538,35.2671107520245,23.3353736670653,15.8079939894285,19.0333975160175,18.7951964374016,3.81868247206045,26.5722234608154,19.3153493770506,19.008939984637,16.517975385143,14.4119292072477,14.8350781023303,11.1582165229204,7.0674104335688,8.42497326396654,3.10669656543463,17.4744810992099,23.7731308209926,28.9552358299921,23.5285937896298,23.5070878729471,22.3022085647827,20.8895884789442,17.7077963387772,20.1329941297365,16.6693043369944,25.3466405506922,18.0126338758062,34.2605613840378,29.8888885349647,28.3227394091593,24.526657306445,18.4773659946576,27.5247579400729,25.5502882012019,25.2416124870369,23.62411006305,20.3668893976418,14.6186821109629,17.7029788618206,13.3239668486989,1.13365191807606,11.9872414821995,13.8159339178593,9.40153851638839,6.95482538515886,4.31669693537719,5.49454872801795,7.07415650960917,3.00943262421218,1.6942555278512,2.30162618253588,2.86447756719698,1.20297227640581,2.05524755931193,0.755393897389701,2.02506750069542,3.60256962579376,3.62513927187364,4.14208249401456,34.8725487882834,12.768795948833,29.5369137954652,13.1277627216879,15.9306003597267,9.19217542250071,10.0011027510727,7.0051919461224,9.30665707816264,10.6132828940795,5.0695859978048,8.86543804514558,9.17686773204848,8.1311943554184,9.76402972245426,9.52587382566147,9.27074607558844,10.0312794641127,11.9504911232959,11.9231125308862,8.22886205724997,8.87379030796687,9.0605752179982,8.86613141457204,10.1638130848557,8.96914843651771,8.78054269789308,10.7858581689516,11.81495790459,10.1005608898393,7.23673610557462,9.65343927280522,5.32000356120596,8.36658942404216,7.9091710502268,9.99242311751784,8.18760629558929,6.23126056740065,7.07766828654721,5.07360263974886,7.65163857547391
|short_description=p1@Rfc3
|short_description=p1@Rfc3
}}
}}

Revision as of 23:04, 18 April 2012

Short description:p1@Rfc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rfc3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000132709, ENSMUST00000140067, ENSMUST00000145106, NM_027009, uc009aus.1, uc009aut.1, uc009auu.1, uc009auv.1_5end
EntrezGene:Rfc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rfc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.69
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A552.47
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.42
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.12
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C19.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F532.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F639.07
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.34
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F98.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C524.46
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F516.73
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A615.02
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D136.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.13
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.57
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C631.23
eyeball, embryo E14.CNhs10521.399-16E224.60
eyeball, embryo E15.CNhs10593.426-16C919.99
eyeball, embryo E17.CNhs11023.1261-18D419.14
eyeball, neonate N00.CNhs11207.633-15C615.65
eyeball, neonate N01.CNhs11140.1532-43E718.96
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E241.39
forelimb, embryo E12.CNhs10600.359-14H229.12
forelimb, embryo E13.CNhs10589.384-1E219.71
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I629.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C833.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D221.87
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.00
heart, embryo E11.CNhs10586.331-24E919.47
heart, embryo E12.CNhs11015.353-12F520.87
heart, embryo E13.CNhs11013.376-3I918.37
heart, embryo E14.CNhs10597.403-26D413.02
heart, embryo E15.CNhs11017.431-16C814.56
heart, embryo E16.CNhs11021.457-17C614.04
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E37.94
heart, neonate N03.CNhs11221.1349-25I211.35
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G111.53
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I537.11
intestine, embryo E13.CNhs11010.381-16D520.90
intestine, embryo E15.CNhs10602.976-16D814.05
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G19.96
kidney, embryo E14.CNhs10606.411-4I933.76
kidney, embryo E15.CNhs10997.434-16F825.25
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I218.74
kidney, embryo E18.CNhs11001.1288-20C716.29
kidney, neonate N00.CNhs11214.646-21G713.19
kidney, neonate N10.CNhs11206.758-6D59.42
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F824.69
liver, embryo E13.CNhs10524.378-3H621.23
liver, embryo E14.CNhs10594.409-16E120.46
liver, embryo E15.CNhs10520.433-16D720.49
liver, embryo E16.CNhs10523.462-17F521.22
liver, embryo E17.CNhs10510.481-18A315.79
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G230.13
lung, embryo E14.CNhs10604.404-26F826.73
lung, embryo E15.CNhs11020.432-17C521.22
lung, embryo E16.CNhs10998.458-17B620.42
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.99
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.01
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.79
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H719.41
ovary, neonate N00.CNhs11217.1299-22I415.80
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F222.07
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E627.37
pituitary gland, embryo E13.CNhs11009.370-44C731.18
pituitary gland, embryo E14.CNhs11037.398-44A519.93
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F618.02
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G49.69
skin, neonate N03.CNhs11215.662-22H312.06
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G219.99
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F220.93
spleen, neonate N10.CNhs11116.752-24D134.28
spleen, neonate N20.CNhs11112.824-19H135.27
spleen, neonate N25.CNhs11099.1354-25G323.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.80
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E326.57
stomach, embryo E15.CNhs10603.1252-16G819.32
stomach, embryo E16.CNhs11022.459-17D419.01
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B814.84
stomach, neonate N07.CNhs11210.718-18A911.16
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I18.42
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F523.77
testis, embryo E15.CNhs11034.443-27C528.96
testis, embryo E16.CNhs11033.470-26G523.53
testis, embryo E17.CNhs11029.486-18I523.51
testis, embryo E18.CNhs11027.503-18G522.30
testis, neonate N00.CNhs11189.1300-22B720.89
testis, neonate N07.CNhs11222.726-26I417.71
testis, neonate N10.CNhs11204.763-44D920.13
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E225.35
thymus, adult.CNhs10471.38-12B518.01
thymus, embryo E14.CNhs11041.402-44I434.26
thymus, embryo E15.CNhs11005.430-45I229.89
thymus, embryo E16.CNhs11002.456-26C528.32
thymus, embryo E17.CNhs10581.478-18C124.53
thymus, embryo E18.CNhs10595.1273-19G418.48
thymus, neonate N02.CNhs11181.1541-43F827.52
thymus, neonate N03.CNhs11137.2104-43C725.55
thymus, neonate N06.CNhs11197.681-26C425.24
thymus, neonate N07.CNhs11211.713-19D323.62
thymus, neonate N10.CNhs11194.748-24E420.37
thymus, neonate N20.CNhs11186.820-7A214.62
thymus, neonate N25.CNhs11125.1362-25G717.70
thymus, neonate N30.CNhs11132.1393-42G213.32
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.40
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I834.87
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:152453731..152453788,-&oldid=972851"