UBERON:0005728: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0005728
|name=extraembryonic mesoderm
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Revision as of 17:23, 15 June 2012
| Name: | extraembryonic mesoderm | ||
|---|---|---|---|
| Definition: | "." [1] | ||
| Xrefs: |
| ||
| Synonyms: | "extra-embryonic mesoderm" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0003081(lateral plate mesoderm),UBERON:0008780(inner cell mass derived epiblast) |
Children
| develops from: | UBERON:0007806 (connecting stalk) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005728 (extraembryonic mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.79e-79 | FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr10:120921270..120921282, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr10:120921270..120921282, - |
| 2.16e-63 | FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_510c878256075d28ba0bf7cd14fe04ab | p8@RAB7L1 |
| 2.16e-63 | FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_510c878256075d28ba0bf7cd14fe04ab | p8@RAB7L1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:180050773..180050786,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:180050773..180050786, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18170731..18170736,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18170731..18170736, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:6191002..6191007,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:6191002..6191007, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74986248..74986275,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74986248..74986275, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:138023015..138023024,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:138023015..138023024, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:15035404..15035424,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:15035404..15035424, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:53245239..53245255,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:53245239..53245255, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:42682242..42682253,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:42682242..42682253, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr17:64034078..64034124,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr17:64034078..64034124, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106397632..106397643,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106397632..106397643, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167983163..167983209,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167983163..167983209, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:7599792..7599797,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:7599792..7599797, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:88854777..88854802,-#_f1700f6fa279d66bc6746540ac32fc48 | p16@CNR1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:45926373..45926388,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:45926373..45926388, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:142250929..142250940,-#_f1700f6fa279d66bc6746540ac32fc48 | p3@AF430683, p3@AF430684, p3@AF430685 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167951727..167951732,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167951727..167951732, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:43934831..43934840,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:43934831..43934840, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:56625901..56625913,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:56625901..56625913, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:228216588..228216609,+#_f1700f6fa279d66bc6746540ac32fc48 | p10@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:39574012..39574015,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr20:39574012..39574015, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:42362820..42362827,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:42362820..42362827, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167932279..167932291,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167932279..167932291, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:12548586..12548602,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:12548586..12548602, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148279057..148279078,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:148279057..148279078, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:172807491..172807499,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:172807491..172807499, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76957754..76957760,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76957754..76957760, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:119281371..119281382,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:119281371..119281382, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:61574767..61574776,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:61574767..61574776, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167748986..167748989,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167748986..167748989, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:40074306..40074328,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:40074306..40074328, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:75002215..75002221,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:75002215..75002221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:22771662..22771675,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr20:22771662..22771675, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:31524425..31524444,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:31524425..31524444, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18180062..18180079,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18180062..18180079, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:24889813..24889821,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr12:24889813..24889821, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74996801..74996811,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74996801..74996811, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:228216610..228216617,+#_f1700f6fa279d66bc6746540ac32fc48 | p18@MFF |
| 1.1e-59 | FFCP PHASE1:Hg19::chr22:37484379..37484392,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr22:37484379..37484392, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74981579..74981583,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74981579..74981583, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:207627342..207627349,+#_f1700f6fa279d66bc6746540ac32fc48 | p3@CR2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:102945487..102945492,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:102945487..102945492, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:75655787..75655802,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:75655787..75655802, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:10987850..10987854,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:10987850..10987854, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76957754..76957760,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76957754..76957760, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:120921294..120921306,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:120921294..120921306, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:138023078..138023089,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:138023078..138023089, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:38216859..38216889,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:38216859..38216889, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:195306434..195306439,-#_f1700f6fa279d66bc6746540ac32fc48 | p10@APOD |
| 1.1e-59 | FFCP PHASE2:Hg19::chr15:43323789..43323811,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr15:43323789..43323811, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:22771722..22771733,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr20:22771722..22771733, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:484706..484722,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:484706..484722, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167982726..167982736,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167982726..167982736, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:11264766..11264775,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:11264766..11264775, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:49488905..49488920,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:49488905..49488920, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr8:59790413..59790418,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:59790413..59790418, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:61574767..61574776,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:61574767..61574776, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:77198556..77198565,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr12:77198556..77198565, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr15:43323789..43323811,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr15:43323789..43323811, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:146004822..146004839,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chrX:146004822..146004839, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:15035430..15035449,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:15035430..15035449, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167957459..167957470,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167957459..167957470, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:43934923..43934932,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:43934923..43934932, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:135486309..135486312,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:135486309..135486312, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148296759..148296767,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:148296759..148296767, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:120921294..120921306,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:120921294..120921306, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:94933452..94933457,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:94933452..94933457, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:24889813..24889821,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr12:24889813..24889821, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr16:86326031..86326033,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr16:86326031..86326033, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:45954712..45954720,-#_f1700f6fa279d66bc6746540ac32fc48 | p41@IGFBP3 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167791926..167791930,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167791926..167791930, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:168204286..168204299,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:168204286..168204299, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:53511768..53511784,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:53511768..53511784, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76017349..76017357,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76017349..76017357, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:135705408..135705462,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:135705408..135705462, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18180040..18180058,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18180040..18180058, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:88854777..88854802,-#_f1700f6fa279d66bc6746540ac32fc48 | p16@CNR1 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:45926373..45926388,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:45926373..45926388, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:18603318..18603327,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:18603318..18603327, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:148284480..148284484,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:148284480..148284484, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18178842..18178867,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18178842..18178867, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:49488858..49488869,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:49488858..49488869, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74995205..74995211,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74995205..74995211, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:111311854..111311862,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:111311854..111311862, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:15035430..15035449,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:15035430..15035449, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:234765062..234765067,+#_f1700f6fa279d66bc6746540ac32fc48 | p6@LINC00184 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:195306394..195306429,-#_f1700f6fa279d66bc6746540ac32fc48 | p5@APOD |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:53510877..53510886,+#_f1700f6fa279d66bc6746540ac32fc48 | p2@uc002qao.2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76017349..76017357,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76017349..76017357, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:10129363..10129369,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chrX:10129363..10129369, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:234631379..234631392,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:234631379..234631392, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:128154946..128154955,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr11:128154946..128154955, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:36393818..36393829,-#_f1700f6fa279d66bc6746540ac32fc48 | p2@ENST00000504344 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:42682291..42682301,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:42682291..42682301, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106397647..106397655,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106397647..106397655, + |
